Bombus affinis (rusty patched bumble bee): 126913980
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Entry
126913980 CDS
T09368
Name
(RefSeq) cell adhesion molecule Dscam2 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
baff04515
]
126913980
Cell adhesion molecules [BR:
baff04515
]
Immunoglobulin superfamily
DSCAM family
126913980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Dscam_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C2-set_3
Ig_6
Ig_4
Motif
Other DBs
NCBI-GeneID:
126913980
NCBI-ProteinID:
XP_050573236
LinkDB
All DBs
Position
3:complement(5368131..5423424)
Genome browser
AA seq
2021 aa
AA seq
DB search
MWRDPPGGGCNIPTYLTTMFILALLALTNVACAEDESMGPVFVKEPPNRVDFSNGTGAVV
ECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLVFPPFRAEDYRQEVHAQVYSCLA
RSPAGSVHSRDVNVRAVVTQPYQPEILTEYVIRGNSAILKCSIPSYIAEFVTVEAWIRED
GEVYIPEDPAVGQDGKYLVLPSGELHIRDVGPEDGYKTYQCRTKHRLTGETRLSATKGRL
VITEPTGNVAPRIAGERYEGGKLVDVPRTLVVALDCSIQGFPVPVTRWYKFIEGSSRRQP
VQLNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAPLAAEIEPNTQT
IDFGRPATFTCNVRGNPIKTISWLKDGKPLGLEEPVLRIDSVKKEDKGMYQCFVRNDQES
AQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTE
RLQVGQYVTVNGDVVSHLNISSIHTNDGGLYKCIAASKVGSAEHSARLNVYGLPFIRHMD
KKAIVAGETLRVTCPVAGYPIESIVWERDTRVLPINRKQKVFPNGTLIIENVERMSDQAT
YTCVARNAQGYSARGTLEVQVMVGPQLAPFTFGDEAANAGDMATVQCAVIKGDLPVKIVW
SLNGRSIDVGRVSGDHSYDIPDIVVTRSSKRISTLTIDSVAARHAGDYSCTAINAAGSAT
HTSVLSVNVPPRWILEPTDKAFAQGSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKL
SNPDISVEDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTA
RRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERS
DSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKR
YVIEYKISKGSWETDIDRVLVPGSQQNVAGVFNLRPATTYHLRIVAENEIGASDPSDTVT
IITAEEAPSGPPTSVRVDALDQHTLKVTWKPPPREDWNGEILGYYVGYKLSSSSDYIYET
VDFSKEDGKEHHLQIMNLKTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQPPHDTT
CTTLTSQTIRVSWMSPPLSAANGVITGYKVIYGPSDTWYDENTKDTKITSSSETILHGLK
KYTNYTMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSAESILVSWRPPSQPN
GVITQYIVYTKADNAEEPTSQKVPPNQLTHEASGLDKQRRYDFWVTASTNIGEGEASKIV
ALAPSVRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTWKVRGAVLQSSDRLRQLP
EGSLFIKEVDRTDAGEYSCYVENSFGHDTVTHQLIVHAPPHSPQVTLTATTTNSLTMKLR
PHPADNAPIHGYTIHYKPEFGDWETAQISSTAQKYTLENLWCGSRYQIYVTAYNGIGTGD
PSDMLNTRTKGSKPIIPEAARFIEVSTNSITLHLSAWSDGGCPMLYFVVEHKKKHQQEWN
QVSNNVKPGGNFVVLDLDPASWYHLRVTAHNNAGFAVAEYEFATLTVTGGTIAPPVRNSG
NDNTDVRRYFPWLPSWLDVNVVVPVGATVVVIIVGIVVICVALSRRTRGPEQTRLRGISS
ADEKYYEGQYDVVYQQTGVGGATLDKRRPDLRDELGYIAPPNRKLPPVPGSNYNTCDRIK
RGTVISGTGSIRSHSTWDPRRHMYEELNHCAPNRRCPPPPRMGSAEALSHRGMEDEICPY
ATFHLLGFREEMDPSKAMQFQTFPHPGNGHSGTMGPPVGHPTNASAHSRSGSQSMPRQNG
RYSRVPSQGGGSGTHNVFSPEYDDPANCAPEEDQYGSQYGQYGAPYDHYGSRGSVGRRSV
GSARNIPVSGSPEPPPPPPRNHDQNNSSFNDSKESNEISEAECDRDQLVNRNYGVNARGK
DGMTTEEMRKLIERNEAPSRQTGAGHGGHGGLLTPYDTVAV
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgatccaccaggaggggggtgtaatatacccacctatctaacgacgatgttt
atattggctcttctggcattgacgaacgtggcttgcgctgaggatgaatctatgggacca
gtattcgtcaaggaaccaccaaaccgagttgacttctctaatggaaccggagctgttgtc
gaatgccaggccagaggaaacccccaaccggatatcatctgggttcgtgctgacggaagt
gctgttggagacgttcctggactcagacaggtcttaccgaacggaaacttggtcttccct
cctttccgcgccgaggattatcgtcaagaagttcatgctcaggtctacagttgtttggcg
cgttccccagcaggttcagttcacagccgagatgttaacgtgagagccgtcgttacgcag
ccgtatcagccagaaattctcacggaatacgtgatcagggggaacagcgcgatcttgaag
tgcagcatcccaagttacatcgcggagttcgttacggtcgaggcgtggatcagggaggac
ggagaggtgtatattccggaggatcctgctgtcggccaggatggaaaatacctggtactg
ccttctggagaacttcacattcgcgatgtcggacccgaagacggatacaagacctatcaa
tgccgcaccaagcatagactcaccggagaaacaagattgtctgccaccaagggacgtctc
gtcattaccgagccgacaggtaacgtcgcgccgcgtatagccggtgaacgttacgagggt
ggcaagctcgtcgacgttccaaggacattggtggtggctctggactgctcgattcaggga
tttcctgtcccagtgacaagatggtacaagttcatcgaaggctcctctcgtcgtcaacct
gtccaactcaatgagcgcgttcgtcaagttagcggaacactgatcattcgcgaggctcgc
gtcgaagattctggcaaatatctgtgcatcgtgaacaactccgtcggcggtgaaagcgtg
gagaccgtgttgactgtaacagcaccattggcagcggaaatcgaacctaacacacagact
atcgactttggaagaccagctactttcacgtgcaacgtcagaggaaatccgatcaagact
atctcctggctgaaggatggcaaacctcttggactggaagaacccgtgctcagaatcgac
agcgtcaagaaggaagataagggaatgtaccagtgttttgttagaaacgatcaagaaagc
gcccaggcaaccgctgaattgaaacttggtggacgattcgaacccccgcagattcgccag
gccttcgccgaggagactcttcaacctggacccagcatgttcctcaagtgtgtcgccagc
ggaaacccaactcctgagattacctgggaactcgatggcaaacggctatccaacactgaa
aggcttcaagtaggacaatacgttacggtgaacggcgacgtggtttctcatttgaacatc
tccagcattcatacaaacgacggtggactctacaaatgcattgccgcttcaaaggttgga
tccgctgaacattctgcgcgtctcaatgtctatggtctgcccttcattcgtcacatggac
aaaaaggctatcgttgctggtgaaactcttcgcgtgacctgtccagtagccggatatccg
atcgaaagcatcgtatgggagagagacaccagagttttgccgatcaacaggaaacagaag
gtcttccctaatggcacgcttatcattgagaacgtcgagagaatgagcgatcaagctact
tacacctgtgttgcacgcaacgctcaaggctacagcgcaaggggaacattggaagttcaa
gttatggtaggaccgcagttagcgccgttcacgttcggtgacgaggctgccaacgcggga
gatatggccaccgttcagtgcgccgtgatcaaaggcgatttgcctgtgaagatcgtgtgg
tcactgaacggtaggtctatcgatgtcggacgcgtgtccggtgaccacagttacgacatt
cctgacatcgtcgtgaccagaagtagtaaacggatcagcaccctgacgatagactcggta
gccgcaagacatgcgggcgactactcgtgcaccgcgatcaacgcagccggatccgctacg
cacacgtcggttctgtcagtgaacgtacctcctcgctggattctggaacccactgataag
gcatttgctcaaggctctgatgcacgtgttgaatgtaaagctgatggtttccccaagccc
caggtcacatggaagaaagctgctggagatacaccgggcgattataccgatttgaaactg
agcaacccagatatcagcgttgaggatggaactctgtcaatcaataatattcagaagacg
aacgagggctattatctgtgcgaggctgtaaatggaattggcgcaggactttcggctgtt
atcttcatctcggttcaggctccaccccactttgagatcaaactgaagaaccagaccgca
cgacgtggagaacctgctgtactgcaatgcgaggctcaaggcgaaaaaccaattggtatt
ttatggaacatgaacaacaagagactggacccgaagagcgattctcgttacaccatccgc
gaagagattttggctaacggcgtactgtctgacctgagcatcaagagaactgagagaagc
gactctgcccttttcacctgcgttgccaccaatgcctttggaagcgatgacaccagcatc
aacatgattgtacaagaggttcctgaagtaccatacggcctgaaggtattagacaaatcc
ggacgatcggttcaattatcctgggcagcaccatacgacggaaacagccccataaaacgc
tatgtcattgaatacaaaatcagcaaaggctcttgggaaactgacattgacagagtactg
gtacccggatcgcaacagaacgtagctggcgttttcaacctgagacctgccaccacatat
cacctgagaattgttgctgagaatgaaattggtgcatccgacccgtctgataccgttacg
attatcactgccgaggaagctcctagcggcccaccaacctctgttcgcgttgacgctctt
gaccagcacactcttaaggtaacatggaaaccacccccacgcgaagactggaatggtgag
attcttggatactacgttggctacaaactctcttcctcctctgactacatttacgaaacc
gttgacttctcgaaggaagatggaaaggaacaccacttgcaaatcatgaatctgaagacc
tacactcaatacagcgttgttgttcaagcgtttaacaaagttggatcgggaccaatgagc
gaggaacgaagacaacacaccgccgaaggagtacctgaacaaccccctcatgacactact
tgcaccaccttgacttcccagactatcagagtttcctggatgtcaccgcctcttagcgcc
gccaatggagtcatcaccggatacaaggttatttacggaccatctgacacctggtacgat
gagaacaccaaggacaccaagatcacctcctccagcgagaccatcttacacggactgaag
aaatacaccaactacactatgcaggttctggcttttacttctggcggcgatggagttaaa
tctgcacctattcactgccaaacggaacaagacgcccctgaagcacctatcgcgatcaag
gctctggttatgtcagctgaatcgattcttgtctcgtggcgcccaccaagccaaccgaat
ggagttatcacccagtatatcgtttacaccaaggcagacaacgcagaggaaccaactagc
cagaaagtaccaccgaatcaactgactcacgaggcatctggattggacaaacaacgtaga
tatgacttctgggtaactgctagtaccaacattggtgaaggagaggcttcaaagatcgtg
gcattggcaccaagcgttcgagtaccggcaaagatcgcatcgtttgacgacaaattcact
gctacctacaaggaagatgttaaattaccctgcctggctgttggagtacctgcaccggaa
gttacatggaaagtacgtggcgccgttcttcaatctagcgacagactgcgacaactgccc
gagggatctctgttcatcaaggaagtcgatcgtaccgatgccggagaatactcttgctat
gtcgagaactcgtttggccatgatactgttactcaccaactgatcgttcacgctccccca
cactcaccgcaagttactcttactgctacgaccaccaactcgttgacgatgaaactgaga
cctcaccctgccgataatgctccgatccatggatacacgattcactacaaacctgaattc
ggcgactgggaaactgcacaaatcagctctactgctcagaaatatactcttgaaaatctg
tggtgtggctcaagataccagatttacgttactgcatataacggaattggaaccggcgat
ccttctgacatgctcaacacacgtaccaagggctcgaaaccgatcattcccgaagcggcc
agattcatcgaagtttccacgaatagcatcaccctgcatctgagcgcctggtccgacggt
ggctgcccaatgctctacttcgtcgtcgaacacaagaagaagcaccaacaggaatggaat
caagtctcgaacaatgtaaaacccggtggaaactttgtcgttttggatttggaccctgct
agctggtatcacttgcgcgttactgctcacaataatgctggtttcgctgtagccgagtat
gaattcgcgacattgaccgtaaccggaggtacgatcgcaccccccgtacgcaacagtggc
aacgacaacacggatgtcaggcgttatttcccctggttacctagctggctcgacgtgaac
gttgtggtgccggtgggagctacggttgttgtgattattgtaggcatagttgtgatttgc
gtcgcgctgtctaggagaactcgaggtccggaacaaacacggctgcgaggtatctcatca
gccgacgagaaatattacgaaggacaatacgatgtggtatatcagcaaactggagttggc
ggagctacccttgacaaacgcaggcccgatcttcgcgacgaacttggatacatcgcccca
ccgaatcgcaaactgccccctgttcccggctcaaattataacacctgcgatcgcatcaag
cgaggtacagtgataagtggaacaggctcgataagaagccactcgacgtgggatcccaga
cgacatatgtacgaagaattgaatcattgcgcaccgaatcgaagatgtccaccaccaccc
cgtatgggcagtgccgaagctctctcccacagaggcatggaggatgagatctgcccgtac
gccaccttccaccttcttggattccgcgaagaaatggaccccagcaaggctatgcaattc
cagaccttccctcaccctggcaatggacactctggtaccatgggaccacctgttggacat
cctactaacgcttctgctcacagccgctctggatctcagtctatgccacgtcaaaatggt
cgttactctcgagttccatcccaaggaggtggcagcggaacccataacgttttctctcct
gaatacgatgacccggcaaactgcgctcctgaagaagatcaatatggctctcaatacgga
caatacggcgctccctatgatcattatggatctcgtggctctgttggacgtcgcagtgta
ggatcggcccgcaatattcccgtttctggatcacccgaaccacccccaccaccaccaagg
aaccatgaccagaacaactccagcttcaacgacagcaaagagagcaacgagatcagcgaa
gcagagtgtgatcgcgaccaacttgtgaaccgcaactacggcgtgaatgctcgcggcaag
gacggcatgaccaccgaggagatgcgtaaactcatagagagaaacgaagcccccagccgg
caaaccggcgccggccacggcggtcacgggggactcctcacaccctacgatactgtggca
gtgtaa
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