Bombus affinis (rusty patched bumble bee): 126914016
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Entry
126914016 CDS
T09368
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04140
Autophagy - animal
baff04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126914016
04148 Efferocytosis
126914016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126914016
Membrane trafficking [BR:
baff04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126914016
Hops complex
126914016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
126914016
NCBI-ProteinID:
XP_050573373
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Position
3:complement(3204807..3209126)
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AA seq
835 aa
AA seq
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MLAMLTADWFPLGRDIYFRKFELYPLSFQDEVSSNNVLVAAPYGGSIAVTRNSKKLVKVQ
GANKPTIYLYTSSGKLTAKLQWSGGQLILLGWSQQEELLCVEDDGMVHIYDMFGTYQHAF
SMGNEVKDTKVVEAKFFVSYSGTGIAVLTSTNRIFLVNNIAEPKVRQISEIPRYGGQIEC
WCLVHCDRETRVILSNRDGIFVIHQSHQTATHIPFDNLFTRHNKVFTIVAMAVSGNNRHI
ALYTDTGHLYMGTIDFNEKYCEHYTNMKEPLENIAWCGTEAVICSWNSTVMVIGRTAETI
IYTYDGPVHLITEIDGVRVLSGSSHEMIQKVPNVVQKIFRINSTDPASYLLEASKQFQKR
SHKADSYMDLVKDKLDAAIKACIDGAGHEFDFETQKLLMRAAKFGKGFSKTINPEYYVNM
CRTLRVLNAVRHPAIGIPLTYTQFTILTSQVLLDRLVARRHYYLSIQIARHLQLPEIDGE
SRILAHWACYKVKQTQLDKEQIAEEIADKLGYAPGVSYSEIARRAADCGRKQLAIKLIDY
EPRAHQQVPLLLTLGEERAALRKAVESGNTDLVYTVILHLRENMPLGDFQMSIMHCPLAM
ALYIKYCQNHNRETLRDIYNQYDDFHSQAIWFITESYQRKNTMSREALLQSAQENFKLAR
NDTNAALTEEQIKLLRYQRSMEDVLKKPIVGKPLQDTVKLLLLRNEYKLADKLRSEYKIS
DRRYWWLRIQCLAEQGVWNELEKFSKSKKSPIGYEPFIDQCLKYNEEREAKKYLPKVRDE
LKVKYLVKLKMMNEAVQTAIEQKDVNALTYLLGQCETTDRQLIDKINMYITSLKN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaatgttaaccgccgattggtttcctttgggtcgagacatctattttagaaaa
tttgaattgtatccgttatctttccaagatgaagtatcaagtaataatgtattagtggca
gctccttatggaggttctatcgcagtcaccagaaattctaagaaattggtgaaagttcaa
ggagcgaataagcctacgatatatttatacacatcttctggaaaactaacagccaagttg
caatggagtggtgggcaactaattcttttgggctggtctcaacaagaagaattactatgt
gtagaagacgatggcatggttcatatatatgatatgtttggtacatatcaacatgctttt
agtatgggaaacgaagtaaaagatactaaggttgtagaagcaaaattttttgtcagttac
agtggaactggtattgcagttctaacatccactaatcgtatatttctagtgaataatata
gctgaaccaaaagttaggcaaatatctgaaattcctagatatggtgggcaaattgaatgc
tggtgtttagttcattgcgatagagaaacgcgtgtgatattatcaaacagagatgggata
tttgtgatacatcagtctcatcaaactgcaactcatataccatttgacaacctttttacc
agacacaataaagtgttcactatagtcgctatggcagtgtctggaaacaatcgtcatatc
gctctttatacggatactgggcatttgtacatgggtactatagatttcaatgaaaaatat
tgcgaacattatacaaatatgaaagagcctttagaaaacatagcatggtgtggaacagaa
gctgtaatatgtagttggaatagtactgtaatggtaatcggacgaacagccgaaaccata
atatacacgtacgatggaccggtacatcttattacagagattgatggtgtacgtgtatta
tctggttcttctcatgaaatgatacaaaaagtaccgaatgtcgttcaaaaaatatttcga
attaattcaaccgatcctgcgtcttatttattggaagcttctaaacagtttcaaaaaagg
agtcacaaagctgatagttacatggatttagtcaaagataaattagatgctgcaataaaa
gcttgcatcgatggagctggccatgaatttgattttgaaacacaaaagcttttaatgagg
gctgctaaatttgggaaaggatttagtaaaacaattaatcctgagtattacgtcaacatg
tgtcgaactttaagagttttaaatgcagtgaggcaccctgcgattggaattccactaaca
tatacacaattcactattctcacgagtcaagtgttattggatagactcgttgcaagaaga
cattactatctaagtatacagattgcacggcatcttcagttaccagagatcgatggagaa
agccgaatattagctcattgggcttgctataaagtaaaacagacgcaattagataaggaa
caaatagcagaagaaatagctgataaattaggctacgcgcctggtgtttcttatagcgaa
attgcaagaagagcagccgactgcggccgaaaacaactagcaattaaactgattgattac
gaaccacgtgcacatcaacaagtgccacttttattaacgcttggtgaagaaagagccgct
ttacgtaaagccgttgaaagtggaaataccgatttggtttataccgtaatacttcatctc
agggagaacatgccactcggtgattttcagatgtccataatgcactgtcctttagctatg
gctttatacatcaaatactgtcaaaatcataatcgagaaacacttcgcgatatttataat
caatatgatgattttcattctcaagcgatatggttcattaccgagagttatcagcgaaag
aatacgatgtcaagagaagcattattacaatctgcacaggagaatttcaagttagctcgt
aacgacactaatgcagctttgacagaagaacaaataaaattattgcgctatcaaaggtct
atggaagatgtattaaagaaaccgattgtagggaaaccacttcaggatactgtaaaatta
ttactattgcgcaatgaatacaaattagctgataaattaagatcagagtataaaatatca
gatcgaagatattggtggttacgaatacaatgtttggccgagcagggagtatggaacgaa
ttggaaaaattctccaaaagtaaaaaatcccctatcggttatgagccttttatagaccaa
tgtctaaaatataatgaagaaagggaagcaaaaaaatatttacctaaagtaagggacgaa
ttgaaagtaaaatacttggttaaattaaaaatgatgaacgaggccgttcaaacggcgata
gaacaaaaagatgttaatgcgttaacttacttactagggcagtgcgaaactacagatagg
caattaattgataaaattaatatgtatataacaagtcttaaaaattga
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