Bombus affinis (rusty patched bumble bee): 126914388
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Entry
126914388 CDS
T09368
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126914388
03016 Transfer RNA biogenesis [BR:
baff03016
]
126914388
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126914388
Spliceosome [BR:
baff03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126914388
Transfer RNA biogenesis [BR:
baff03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
126914388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126914388
NCBI-ProteinID:
XP_050574235
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All DBs
Position
3:complement(17361502..17364869)
Genome browser
AA seq
733 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVDEMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPV
LQIVWETFKDLESGKTGKTSSNSGHQQHSSHWLLSLFDRGRALAVTPDGLRCQSREQKEW
HGCRANKGILGKGKYFFEAIVTDEGLCRVGWSTSQASLDLGTDKFGFGYGGTGKKSNAKQ
FDNYGKAFGMHDVVGCLLNLSKGEISFSLNGVDLGPAFTLNAQQKSQTFYPAVVLKNAEM
SFNFGAQPFKYPPPNDYIAVASAPKEVINENPVNSSQAHRENGKPKCNAPQAIIMEPSRE
LAEQTYNQIQKFKKHLKDPVIRELLVIGGVSVKEQIATLNSGVDIVVGTPGRLEDLIQGG
YLSLTHCRFFILDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHAFEVKK
MAERLMHFPTWVDLKGEDAVPETVHHVVVIIDPQKDKSWHNLRKHIETDGIHNRDNIRPG
NNNPETLSEAVKILKGEYCIRAIKEHNMDRAIIFCRTKLDCDNLERYLKQSGGNQFSCVC
LHGDRKPAERKSNLEKFKRQEVKFLICTDVAARGLDISGLPFMINMTLPDEKSNYVHRIG
RVGRAERMGLAISLVSKVPEKVWYHGEWCPSRGRNCYNTNLTDKGGCCIWYNEPNYLAEI
EDHLNVTIQQVDADIKVPLNDFDGKVVYGEKKAAMGSNYQNHVQQMAPYVNELSSLESKT
QLLYLKRHMVKTS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattcgaagaaatgggtgttttacccgaaatcgcgaaagcagttgacgaaatg
gagtggacattgccaactgatgttcaagctgaggcagttccactgattttgggtggtgga
gatgtgttaatggctgcagaaactggcagtgggaaaactggtgccttttgtctaccagtt
ttgcaaattgtttgggaaacttttaaggatctagagtctggtaaaactggcaagacctcg
agcaatagtggacatcagcaacattcttcacattggttgttaagtttatttgatagaggt
agagcattagctgtgactccagatggtttacgatgccagagtcgtgaacagaaagaatgg
catggctgtagagcaaacaaaggaattctaggaaaaggcaaatacttctttgaagctata
gtaactgatgaaggattatgtcgtgtaggctggtctacatctcaagcttcactggattta
ggaacagataaatttggttttggatatggtggtactggcaaaaaatcaaatgcaaaacaa
tttgataattacggaaaggcttttggaatgcacgatgttgttggatgtcttctgaattta
tcaaagggtgaaattagcttctcattgaatggtgtggatctgggtccagcatttactctg
aatgcacaacaaaaatcacagactttttacccagctgtagtattgaaaaacgcagaaatg
tcattcaattttggagcacagccatttaagtatccccctccaaatgattatatagctgtt
gcttcagctcctaaggaagttataaatgagaatcctgtaaacagtagccaagctcatagg
gaaaatggcaagcctaaatgcaatgcccctcaagctataatcatggaaccttcgagagaa
ctcgctgaacaaacatataatcaaattcaaaaatttaaaaaacatttgaaagatccagtc
attagagaattattagttattggaggagttagcgtaaaagaacaaattgctacattaaat
tctggtgtggatatagtagttggaacaccaggtcgtttagaagatttaatacaaggtggc
tacttgtccttaacacattgcaggtttttcattttggacgaagccgatggtttattgaag
caaggctacacggaattaatcgatcgtttgcacagacagataccaaaaattacgtcagat
gggaaaagattacaaatgatcgtttgttctgccacactgcatgcatttgaagttaaaaaa
atggcggaacgtttgatgcactttccaacgtgggtagacttaaaaggtgaagatgcagtt
cccgaaacagtacaccatgttgttgtaataatcgatccacagaaagataaatcttggcat
aacttaaggaaacatatagaaactgacggtattcataacagggataacataagacctgga
aataacaatcctgagacactctcagaggctgtgaaaatattaaaaggtgaatactgtatt
cgtgccattaaagagcacaacatggacagagctataattttctgtagaactaaattagac
tgcgataacttggaacgatatttgaaacaatctggtggaaaccaattttcatgcgtatgt
ctccacggtgatagaaagcccgcggaacgcaaatctaatttagagaagttcaaaaggcag
gaagtaaagttcttgatttgtaccgatgtcgcagctagaggtttagatatttcgggctta
ccttttatgattaatatgactctacctgacgagaaatccaactacgtacatcgcataggt
agagtcggcagagctgaacgaatgggtctagcaatttcactagttagtaaagttcctgaa
aaagtatggtatcacggcgaatggtgtccttctcgtggaaggaactgttacaatactaat
ctcactgataagggtggttgttgcatttggtacaacgaaccgaactacttggctgaaatc
gaggatcatttaaatgtcacgattcaacaagtcgatgcagatataaaggttccattaaat
gattttgacgggaaagttgtatacggagaaaagaaagcagccatgggttcaaattaccaa
aatcatgtacagcaaatggcgccctacgtgaacgaattatcttctttggaatcaaaaaca
caacttttatatttgaagaggcatatggtaaaaacaagctaa
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