Bombus affinis (rusty patched bumble bee): 126914552
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Entry
126914552 CDS
T09368
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
baff03015
mRNA surveillance pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126914552
09122 Translation
03013 Nucleocytoplasmic transport
126914552
03015 mRNA surveillance pathway
126914552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126914552
03041 Spliceosome [BR:
baff03041
]
126914552
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126914552
Spliceosome [BR:
baff03041
]
Complex C
Other components
EJC/TREX
126914552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
126914552
NCBI-ProteinID:
XP_050574586
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Position
3:327335..335594
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AA seq
852 aa
AA seq
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MRRKSERNKAKAGSPEKEVERVTRKSTRKCVKQASSTSLEQENVEETTKGLSNKITEKKS
AHIQKKEAEQLEEQNEKVLSIETDVKTKSQEDEEDNNSGSIWKVSRSDASPGEIQRLKLS
RQHNTTEGSSDTSLNRKKSNKWQESGEGVAEEVDSADKQLVSSTRVPSSTEQPNDPSSSY
PGQDSNEEVSDSKEILPETTSANLSDDKPNIDQQGESNEANYSNENADSKPIKSTSTTIS
APSSNGNHSSEETNIMPKEEKSVEDTSEKTVEAFNKETSVENTQRDSSSDEEEDKKEKVR
ELNSSSESNDEIHTKSNRTGGRIQSASRRKHRTKYRDSSNSDTPDSEDEPSIKRDLEIDV
CMQEEKISTEDSHEQKDHTESPKARNNFLLNNMEMEIEHCEANKQKLDNLVDKSEYTASA
TTQLVTYKPVKVNLKRSFSSRMLTEKNDVKKEDTDANANNEASTPNKENHDSTEPDAKCV
PRKRRWGTALSTDTAPSFSISTDSLKALVPGARPLSINEVRLSKDDDEDRDRYRVSEKWH
NSNEGINDNKSGDENIMQKNGATKKGDPKIDNHIVKLWFIAARRKISIVKEVPHVKSPSP
PATKPTNILLIKNLVRPFTLNQIKELLSRTGTIVENGFWMDRIKSKCFVEYANEDQAFET
RQALHGISWPVSNPKRLHVEYATKDDMELARELSKDQSIPRKTEPLVPSDSWQQDWNREE
RTNTKVMVVREWDLGKEDGQQHIKEKEREKKEHDKKRRQRSRSPAVEAHLPAPARKFKKK
EDEPPPAKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHMAEHARRLEEMRRAERN
NRDGRRRRSPRK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaaaagtgaaagaaacaaagcaaaagcagggtctccagagaaagaggttgaa
cgagtaacacgaaaatcaactcgaaaatgtgtaaaacaagcatcttcaacatccttagaa
caagaaaatgttgaggaaacaacaaaaggtttgagcaataaaatcacggaaaagaaatca
gcacacatacagaaaaaggaagcggaacaattagaagaacaaaatgaaaaagttttgtct
attgaaacagatgttaagaccaaatcacaagaagatgaagaagacaacaattctggatca
atctggaaagtgtcaagatccgatgcatcacctggcgagatacagagattaaaattatct
agacagcataacacaacagaagggtcatctgatacttctttaaataggaaaaaatcgaac
aagtggcaggaaagtggtgagggagttgcagaggaggttgactcggcagacaagcaactg
gtttcctctacaagagtacccagtagcactgaacagccgaacgatccctcctcttcatac
ccaggtcaggactccaacgaagaggtaagtgatagcaaggagatcctgcctgaaaccact
tcagccaacttgtctgacgataaaccaaacatagatcagcaaggtgaatcaaatgaggca
aattactccaacgaaaacgctgatagtaaacccattaagtcgactagtacaactatatca
gctcctagttcaaatggtaatcattcatccgaggagacaaacattatgcccaaggaagaa
aaatctgtggaagatactagtgaaaagacagtggaagcatttaataaagaaactagcgtt
gaaaacactcaaagagattcaagcagtgacgaggaagaagataaaaaggaaaaagttcgt
gagctaaattcatcatctgaatcaaatgatgaaattcatactaagagtaatagaactggt
ggcaggatacaaagtgccagtcgcagaaaacatcgaactaaatatcgagattcatctaat
tctgatacaccagattctgaggatgaaccttctattaaaagagatcttgaaattgatgta
tgtatgcaagaagagaaaataagtacagaggattcccacgaacagaaagatcatactgag
tcaccaaaagcaaggaataattttttattaaataacatggaaatggaaatagaacattgt
gaagcaaataaacaaaaattagacaatctagttgataaatcagaatatactgcatcagca
acaactcagttggtgacttacaaacccgtgaaagtaaatttaaaaagatcattttcttcg
agaatgttaacagaaaagaatgatgttaaaaaagaagatactgatgcaaatgcaaataat
gaagcgagtactccaaataaggaaaatcacgacagcaccgaaccagatgccaaatgtgtt
ccgagaaagcgtcgatggggtactgcattatctactgacaccgcaccttcgttttcaatt
tctacggattcacttaaagcgttggtgccaggagcaagaccattgtcgataaatgaggtt
cgtctttcaaaagatgacgatgaagacagggatcgttatcgagttagcgaaaagtggcac
aattctaatgaaggaataaacgacaataaatccggtgacgaaaacatcatgcaaaagaat
ggtgcaacaaaaaaaggagacccaaagatagataatcatatagttaaattgtggtttata
gcagcaaggcgtaagatatcgattgttaaagaagtgccacatgtgaaatctccaagtcca
cctgctacgaagcccacaaatatccttctgatcaaaaacttggttcgtccgttcactttg
aatcaaattaaagaacttctatcgcgtactggcacaattgtcgaaaatggattttggatg
gatcgaattaaatccaagtgttttgtagagtatgctaacgaagaccaggcatttgagacg
aggcaagcgttacatggtatatcctggccagtttcaaacccaaagaggcttcatgttgaa
tatgcaaccaaagatgacatggaattagcacgcgaattatcaaaagatcaatccatccca
agaaaaactgaacctctcgtaccgtctgattcatggcagcaggattggaatcgcgaagaa
agaacgaatacaaaggtgatggtagttcgagaatgggatcttggtaaagaagatggacaa
cagcatataaaagaaaaagaacgtgaaaagaaagaacatgataaaaaaaggcgacagagg
agtcggagtccagcagtggaagcacaccttccagctccagctcgtaaatttaaaaagaaa
gaggatgagccaccaccggctaagcttttagatgatctctttagaaaaacgaaagcaacg
ccatgcatatactggttaccactcacaaatgaacagatagtcgtaaaagaagaaatgaga
aggcaacacatggcagaacatgcacgcagattagaggagatgagacgcgctgaaagaaac
aacagggacggtcgtcgccgtcgcagcccaagaaaatag
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