Bombus affinis (rusty patched bumble bee): 126915053
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Entry
126915053 CDS
T09368
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126915053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126915053
03021 Transcription machinery [BR:
baff03021
]
126915053
03036 Chromosome and associated proteins [BR:
baff03036
]
126915053
Transcription factors [BR:
baff03000
]
Eukaryotic type
Helix-turn-helix
ARID
126915053
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126915053
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
126915053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
BAF250_C
DUF2196
Motif
Other DBs
NCBI-GeneID:
126915053
NCBI-ProteinID:
XP_050575323
LinkDB
All DBs
Position
4:11506686..11563580
Genome browser
AA seq
1839 aa
AA seq
DB search
MAKILNKDPVTYERERDNFLKDLRHFHETRGTPFKKNPKINGKDIDLYLLYVVVTAHGGW
IKVNTRNEWASLCEQFHLPNGCVNSGVGLKQIYLRYLDRYEKVHFLGEDGQQADDDDEDS
RHRKWSARALHSVPLTYNHHQHNVAESLRDYNGLSSDLYKPSNYDKLALSLLSPLPNEQD
FAINVCTLLSNEGKHILRLDKYPRLVNILLAHAGIFDSPGTRQLFIEVYSRVRNYSINSF
WSDVLDSQDVIDLTNERTFMKKPTASPQTFSRRKILEREKQNRNAASTENDEASTSMEVD
GVIPDCPRLDPTGSHQDDILKDQNQNSIKFEEEDKDLFCVGRTLGTQDPYGQRVLQIASI
LRNLSFTPENAAVLGRNRCFLRFVLLCVRARWSNLHQLGFDILGNIANEIILKEAGERIT
DVVLSCVAKGIESQDRFIVISCLEVLNKISQQDSNEEIIRFGLEDNVYELICRFLALNDI
ALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVIETVS
TVAPPPNATQNTPVTATAPATTVSSSVPTTPVTVTATPAPVSPAPSRPTTPAATATKSTT
HKAVETSNSLQQQHAHQQIIQENEQFALSWLRATFEPALGIRIEQEELYKKYLGCCTKIG
RRGVIAPLHFPRCVRSVFGGSVGPNPLKGETSGTQYYEGIRVRATPPQVTYPSQTAVGTN
TAPIPAVNTTPVKVLPVQQRTIKSISPAPDSTALDNPASGPPRTPAPASPILKAQLSAPP
KPPSSISNTATQSQNPVTKVDSKSQVSVSHPHLSQALLSSGSQTQPQPQVQQVQQQCQTV
QVVAKEDNRSGTTSSSIIKSLLATKVTVSSDCMPSTAATCVTTPTACVTNTTASIASSIS
ANQLITSNQVAQRQQQQRLLQQQLTNISQPPTTTTSVTTILPKTPVNSKQKPAITPIPAK
KIQRLNGAKFIITNNCDKTEVNDNENVNQIVTSTTSSTVVLNSTENHISSTIKVCRPPAI
TVTTANKAIQRSTCTSIAEDSDSTNNSLASSSGIGGSRDCSGVGIEEDNSLTSFEGILLN
GAPSNMDIDAQEDGSSKDSSSVTSKEKPLQSMMLADLLERKVDKEPILNGVLGKNSINDK
GMDLVENHIKKVLKESPTDIKIKAEVEETEVSEDTLIEAPRGIKRSASELDEVDVKKVKY
SNGTMSPDLAVDSTTAESTVSSIKSEEQDDDKDNEKVTVSSTAANLYAALAADCIEDETD
LDENVNVSVKEESISIKEPITIKEEPVNTMKEDPITIKEEPHVFVNQINQQPPQQQQPSQ
QQPQQQPQQPPPQSQHPQPQVQQQQQQQQQQQQQQQQQQPQLQPQQLIVTAPRQIVVQQT
IQPNNQVIIPTGPVKGRQAQPQPQVLLQQGAGGQLQYVVSGGVPGQNYVLAQPQTTLVQG
QAQTVLVAQTTQQQGTGAKTIIILQSQAAAQPTQQKMVAVTPQGQQVVVTQVSRPILQSP
ALGNIPPPLVPTSGTIPQTSIIVNSSVAQTNPNTVTVTIPAMAQQTPVSTSVPSRVVTPT
PASTPPPTRPTTPHQAAATHGLPAKQPAKVMKTVSSSTSTEPESKPSTSQNQPEKTITIK
IDPNAYLCEWRGCLRQFKTPHEVYLHVCEAHCPTGGEEILCLWASCDALKRRRFSLMTHL
YDRHCNAETMSIRRKQLTVTGKTEVSTSTPSAPHHPGYAPNAAFHAIKRHALEFVNPKEL
MQRPTKPAAATSSSSSPRPGQNPPPEQDDNEGPVTKSIRLTAALILRNLVIYSTHGRRHL
RAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSNHSVK
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcctcaacaaggaccccgtcacctacgagagggagagggacaacttcctt
aaggacctccgtcatttccatgagactagagggactccgttcaagaaaaatccgaaaatc
aatggaaaagatatagatctgtacttgttgtacgttgtcgttactgcccatggcggatgg
ataaaggtgaataccagaaacgaatgggcatcgttatgcgaacaattccatctacccaat
ggctgcgtgaacagcggggttggccttaaacaaatttacctcaggtatctggacaggtat
gagaaggtacattttctaggagaggatggccaacaagctgacgacgacgacgaggattct
agacacagaaagtggtctgccagggcattacactccgttcctcttacttataatcatcat
caacacaatgtcgcagaatctcttcgtgattacaatggcctttcgtcggacctctacaag
ccatccaactacgataaactcgcgctatcgcttctctcgcctcttcccaacgaacaagac
ttcgccatcaacgtgtgcacgttgctgtcgaacgaaggcaagcacatcctacgtctcgac
aagtatccccgtctcgtcaacatactcctggcgcacgccggtatcttcgactcacccggc
acacggcagctcttcatcgaggtctattcccgcgtgaggaattactcgatcaactcgttc
tggtcggacgttctcgactcccaggacgtgatagatcttacgaacgagaggacgtttatg
aagaaaccaaccgccagtccgcagaccttctccagacggaaaatcttggagagagagaag
cagaacagaaacgcagcgtcaacggagaacgacgaggcttccacgtcgatggaagtcgac
ggggtgataccagactgtccaaggctggatccaactggctcgcatcaagatgacattctg
aaagatcaaaatcaaaactccataaagttcgaagaggaggacaaagatttgttttgtgtc
ggacgaactctcggaacgcaggatccttatggccaacgtgtgctacaaatagcgtctatc
ttacggaatctaagtttcactccagagaacgccgctgtattaggaagaaatcgatgtttc
ttgagatttgtattgctctgtgtgcgagcaaggtggagtaatttgcaccaacttggtttc
gatatactaggcaacatagcgaatgaaataatcttgaaagaagctggtgaaaggataacc
gatgttgtattgtcgtgtgtagcaaagggaatcgaatcccaagacaggtttatcgttatt
tcctgcttggaggtgcttaacaaaattagccaacaagacagcaacgaagaaatcattagg
tttggattagaagacaatgtatatgaacttatatgcaggtttttggctctgaacgacata
gctcttctggtatataccttggaatgtttgtacgcgttgacttcgttaggtgaaaggcca
tgtaccagtgttgcgcgcgtacgcggagctatcgacacattggtcgctcttgttaccgta
gaagcgcaaagttacggtccaaaagcatgtattctgatgagggtgatcgagacagtgtcc
acggtagcaccgccaccaaacgctactcagaacactccggttaccgctactgccccagct
acaacagtgtcctcctctgtaccaaccacaccggttacagtcaccgcgacaccagctcct
gttagtccagcgccgtcgcgaccaacgacaccagccgccactgcgacaaaatctaccacg
cacaaagcagtggagacgagtaattcgcttcaacagcagcacgcgcatcaacaaatcata
caggaaaacgagcagttcgctctgagttggttaagagctaccttcgaacctgcgcttggc
atacgtatagaacaggaagagttatacaaaaagtatctcggttgctgcacaaagatcggt
agaagaggcgttatcgctccgcttcactttccaagatgtgttagatctgtatttggtgga
agcgtcggaccaaatccgttgaaaggtgaaacgagcggtactcagtattacgaaggaatc
cgagtacgggccacacctccccaagtaacttatccgagccaaactgcggttgggactaac
acagctccaattccagcagtcaacacaacgccagtaaaggtgcttcccgtacaacagcgt
acaatcaagagtataagtcctgctcctgatagcacggccctagacaatcctgcatctggg
cctccaagaacccctgccccagcgtcacctatcctaaaagcccaattgtctgctccaccg
aaaccaccatccagtatctcgaacactgcaactcaatcccaaaatccagtcaccaaggtt
gattctaaaagtcaggtgtcggtgtcgcatcctcacctgagtcaagcgttgctgtcaagt
ggttcccaaacacagcctcaaccacaagtccagcaagtacagcaacagtgtcaaacggtc
caggtagttgcaaaggaagataatcgaagtggtactacatccagttccataataaaaagc
cttctggctactaaggtaacggtcagcagcgactgcatgcccagtactgctgcgacttgt
gtgactacccctactgcctgtgtaacaaacactactgctagcatcgcatccagcatcagt
gccaaccagctaataaccagcaaccaggttgcacaacgtcaacaacaacaaaggttactg
caacaacagttaaccaatatatcgcaaccacctacaactacaactagcgtaaccacaata
ctcccaaagactcctgtcaactcgaagcaaaagccagctatcacacccattcctgccaag
aagatacaaaggctcaacggggccaaatttattatcactaataattgtgacaagactgaa
gtaaatgataatgagaatgtcaaccaaatcgtaacatcgacaacttcttccacggtggtt
ttgaactcaaccgaaaatcacatatcgtcaaccattaaagtatgtcggcctccagctata
actgtaactacagcgaacaaagcgatccaacgttcgacttgtacatcgatcgccgaagat
tcggactcgaccaataattctttggcatccagtagtggtatcggtggtagtagggattgt
tctggtgtcggtatagaggaggacaattctttgacgagtttcgagggaattctgttaaac
ggtgcacctagtaatatggacatcgacgcgcaggaagatggatcttcgaaagattcgtct
agtgtaacgtctaaagaaaaacccctgcaaagtatgatgcttgcagatttgttagaaagg
aaagttgacaaggagccgattttaaacggcgtgttagggaaaaattcaatcaatgacaag
ggaatggacttagtagaaaatcatattaagaaagtactaaaagaatctcctactgacatt
aaaataaaagctgaggtagaagagacggaggtctccgaggatactttgatcgaagcaccc
agagggataaaacgatctgccagcgaattagatgaagtagatgtaaagaaagtaaaatat
tccaatggtacgatgtcgccggatcttgctgttgattcgactaccgccgaatctactgtc
tcgagtataaagtctgaagaacaggacgatgataaagataacgagaaagtgaccgtgtct
tctacagccgcgaatctttatgctgctctggcagcggattgtatagaagacgaaacggat
cttgacgagaacgttaatgtaagcgttaaggaagaatctattagtataaaagaacctatc
acgataaaggaggaacctgtcaacacgatgaaagaggatcctatcacgataaaagaggaa
cctcacgtattcgtcaatcaaattaatcaacaaccacctcaacagcagcagccatcgcaa
cagcaaccacagcagcaaccacaacagccaccaccacaatcacaacacccgcaaccacaa
gtgcaacaacaacaacaacaacagcagcaacaacaacaacaacagcagcagcagcagcca
caattacagccacaacaacttatcgttacagcacctaggcaaatagtagtacaacaaaca
attcaaccaaataatcaagttattataccaactggtccagtaaaaggaaggcaggcccaa
ccgcaaccgcaagttttattgcaacaaggagcaggaggtcaattacagtatgttgtttct
ggtggcgtgcctggtcaaaattacgtcctagctcaaccacaaacgacattggttcaaggt
caagcgcagactgtgttagtagctcagacgacacagcagcaaggaactggtgcaaaaacg
ataattattctacaatctcaagcagctgctcagccaacccaacaaaaaatggtggccgtc
acacctcagggacaacaggttgttgttacacaagtttcacgtcctatcttgcaaagtccg
gcactcggtaatatacccccgcctttggttccaacgtcaggcacaattccacaaacttct
ataatagtgaacagttccgtggcacaaacaaatcccaacacagtgactgtcacgattcct
gcaatggcccaacaaacaccagtgtcaactagtgtaccatcgagagtggtgacaccaaca
ccggcttctactccaccccctaccagacctaccacgcctcatcaagcagctgcaacgcat
ggattgccggcgaaacaacctgctaaagtaatgaagactgtcagttcctcgacctccaca
gaaccggaatccaagccgtctacgagccagaatcaaccagaaaagaccatcaccatcaaa
atcgatcctaatgcttatttgtgcgaatggcggggttgtttaaggcaatttaaaacacca
cacgaagtttatcttcatgtctgcgaagcacattgtccaactggtggagaggaaatatta
tgtctttgggcgagttgcgatgccttaaaaagacgtagattttcgttaatgacacattta
tacgataggcattgtaacgcggagacaatgtcgataagaaggaaacagttgacggtaaca
ggcaaaaccgaagtttccacgtcgacaccgtcagctcctcatcatcctgggtatgcaccg
aatgcagcattccatgctattaaacggcacgccttggaatttgtaaatccaaaggagtta
atgcaaaggccgaccaagcccgctgcagccacttcaagctcttcttcccccagacctggg
caaaatcctccaccagaacaggatgacaacgaaggtccagtgaccaaaagtattcgcttg
acagcagctctcattctcagaaacctagtcatatattcaacacatggcagaaggcatctt
agagcgtacgaaccacatttggcaggtgtcgcattaagtaatgtcgaatcatcgagaaca
atcgcacaagttttgtacgatatgaacgatcaaagcagcagtaaccatagtgtaaagtga
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integrated database retrieval system
