Bombus affinis (rusty patched bumble bee): 126915057
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Entry
126915057 CDS
T09368
Name
(RefSeq) recQ-like DNA helicase Blm isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03440
Homologous recombination
baff03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126915057
03460 Fanconi anemia pathway
126915057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baff03032
]
126915057
03400 DNA repair and recombination proteins [BR:
baff03400
]
126915057
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126915057
DNA replication proteins [BR:
baff03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
126915057
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
126915057
Bloom's syndrome complex (BTR)
126915057
FA (Fanconi anemia) pathway
126915057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ_Zn_bind
Helicase_C
HRDC
Motif
Other DBs
NCBI-GeneID:
126915057
NCBI-ProteinID:
XP_050575338
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All DBs
Position
4:12544736..12553136
Genome browser
AA seq
1353 aa
AA seq
DB search
MNVILYSKMSRKVPLSQNEIQPTFKGFLARMKSKRDVQSSTPKSSNTNVKPGDLDTSMDF
KLINTEKLETNDKMSIISLNSSEDSMYYNVTKSTTKANDSNLKDNYEESSKGENSCRNVQ
KSQIRHSYLSDSDDDIVIKSTLSLNRKKKVLNSSNEEQISNKSLLSTKGDKPLDNIFLHT
TTESNNMQTETQEKYLIGSNSPRTPKKCSNFKKKENIIISDSDSSPNFKQSLKRTPTKGW
IGPDFKLDLKPLGLGKQLDSWIQSTKGKPIMASIPITKDELENRHKHLKDFQIEILSKFY
TALDQIPLPVLEKFPQFNARSFQELKILYQHVKAKIRLVETKLAHIKIDENKKVADNELS
DVTNNFPLFKTSETLNQQSVISISDNDSFSVSNTNLLDAESSCTAKTQTILSTVKEFPNF
LQKEAESQIKDQKNGIDLQSSVKIKSDDSPVQGKKSTFELKRPIKATGSELSKQIGEIWK
KEEGSKVTNTKTIVSNLNANTSFDNTYNIEKVQISESACPEWKERENFQISEKLGCENEP
DDWNVTDVPYMKDKISFSEEIVDCLTQEFNQFPTLSKDCNIKLNLSAGATQNNDNESKKE
QKKDKINSAIGIFTGSYKNDGVSGEFDGLTYPHSREMLKVFRQKFGLYSFRPNQLQAINA
AILGFDCFVLMPTGGGKSLCYQLPALLLPGVTIVISPLKSLILDQVQKLTSLDIPAAHMS
GGITDSQASGIYRELSKKEPSLKLLYVTPEKISASQKFCNLLTTLYERGLLARFVIDEAH
CVSQWGHDFRPDYKKLNRLRENYPKVPVIALTATATPRVRTDILHQLGLSVPKWFMSSFN
RPNLRYSIIAKKGKNCSDEVIAMLKMKYKNECGIVYCLSRKDCDDYAMQMRKNGIKALSY
HAGHTDSSRTDIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGR
AGRDGENADCILFYNYADMHRIRKMIELDNPNPTVTKTHIDNLYKMVSFCENKTDCRRAQ
QLHYFGEMFDRQQCIANKATSCDNCRCKDDFTMLDTTDEAKHILRAVRDINQSRNSNLTL
VLLTDIFKGSDLKKLRESGLTKNPLYGRGRSWNRHDIERLLHYMVLKEYLQEQMYINNEI
ACAYLKIGPNASELMTKKDIKVMLPMKSSNNSTTAVATVSTVTKKIDKVLLELQQRCYQE
LMEIIKGIAGALDISASSVMNMIAIRAMSQNLPDSEEAMLRIPHVTKANFEKYGKALLDI
TQKYAAEKYVLMNEEKEDSNNDADDDTWYNDTTTFTAKSNTVRGRKRKCKNSYRNTNKKY
KRTSSNSRRGKATTKVKNTTTYSNKGPGLVSFS
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttattttgtatagtaaaatgtcaagaaaggttccacttagtcagaatgaaata
caacctacattcaaaggatttcttgcacgtatgaaaagtaaacgtgatgtacaatccagc
actcctaagtcatcaaatacaaatgtaaaaccaggtgatttagatacatctatggacttt
aaactcatcaatactgagaaattagaaacaaatgataaaatgtctatcatatctcttaat
agctctgaggactcaatgtattacaatgttactaaaagtaccacaaaagcaaatgatagc
aatttgaaagataattatgaagaaagttctaaaggagagaattcatgtagaaatgtacaa
aaatcacaaattagacatagttacttatcagacagtgatgacgacatagtgataaaatca
actttaagtttaaatagaaaaaaaaaagttcttaatagtagcaatgaagaacaaatatca
aataaaagtttattatctacaaaaggggataaaccacttgataatatatttttgcataca
actaccgagagcaataatatgcaaacagaaacacaagaaaaatatttgattggaagtaat
agtccaagaacaccaaaaaaatgttcaaacttcaagaaaaaagaaaatattataatatca
gattcagatagcagcccaaattttaaacaaagtttaaaaagaacccctacaaaaggatgg
atagggccagatttcaaattagatttaaaacctttaggcttaggaaaacagttggattca
tggatacaatctacaaaaggaaaaccaataatggcttcaataccgattacaaaagatgaa
ttggaaaatagacataagcatttaaaagattttcaaatagaaattcttagtaaattttac
actgcattagaccaaataccactaccagtactagaaaaatttccacagtttaatgcacgt
tcatttcaagaattaaaaattttatatcaacacgttaaagcaaaaattcgtttagttgag
acaaagttagcacatattaaaattgatgaaaacaaaaaagttgctgacaacgaattatct
gatgttacgaataattttccattatttaaaacatctgaaactttaaatcagcagtcagtt
ataagtatttcagataatgatagttttagtgtatctaatactaatttattagatgcagaa
tcaagttgtactgcgaagacacaaacgatcttgtcaacagtaaaagaattccccaatttc
ttacaaaaagaagctgaatcacaaataaaggatcaaaagaacggtattgatttacagagt
tctgtaaaaattaaatcagatgattctccagttcaaggaaaaaaaagtacatttgaattg
aaaaggcccattaaagcaactggttctgaactttctaaacaaataggagaaatatggaaa
aaggaagaagggtccaaagttactaatactaaaactatagtttctaacttaaatgcaaat
accagttttgacaatacatataatatagaaaaagtacaaattagtgaaagtgcatgtcct
gaatggaaagaaagagaaaattttcaaatttctgaaaaactaggatgtgaaaatgaacca
gatgattggaatgtaacggatgtgccatatatgaaagacaaaatttcattttctgaagag
atagttgattgtttaactcaagaatttaatcaatttcccacattgagtaaagattgcaat
ataaagctgaatttatcagcaggtgctacacaaaataatgataatgaaagtaaaaaagaa
cagaaaaaagataaaataaattcagcaataggtatctttactggaagttataagaatgat
ggtgttagtggtgaatttgatggactaacatatccgcattcacgagaaatgttaaaggtt
tttcgacaaaaatttggattatattcatttagaccaaaccaattgcaagcaattaatgct
gcaattttagggtttgactgttttgtgttaatgccaactggaggaggaaagtcactatgc
tatcaactcccagcacttttattacctggagtaacaattgtaatttcaccattgaaaagt
ctcattcttgatcaagttcaaaaacttacttctcttgatattccagccgcacatatgtct
ggtggaataacagatagtcaagcaagcggaatatatagagaactttcaaagaaagaacca
tctcttaaattattatatgtaacaccagaaaaaatttctgcgtctcaaaaattttgcaat
cttttgactacattatatgaaaggggattattagcaagatttgttattgatgaagcacat
tgcgttagtcagtggggtcatgattttcgccctgattataaaaaattaaatcgtctcaga
gaaaattatcctaaagtaccagtgattgcactaactgcaactgctacaccaagagttaga
actgatatattacatcaattaggtctcagtgtacctaaatggtttatgtcaagttttaat
aggcctaatttaagatatagtataattgcaaaaaaaggaaaaaattgttcagatgaagta
atagctatgctaaaaatgaagtacaagaatgagtgtggtattgtttactgtttatctcgc
aaagattgtgatgattatgcgatgcaaatgagaaaaaatggcattaaggcactgagttat
catgctggtcatacagatagtagtaggactgatattcaaggccgatggatttcagaagaa
atcaaagttgtttgtgcaacaatagcatttggaatggggattgataaacccaatgtacga
tttgtaattcatgcagctcttccaaaatctattgaaggttactatcaagaaagtggacgc
gctggacgcgatggagaaaatgcagactgtatattattttataattatgctgatatgcac
agaattagaaaaatgatcgagctagacaacccaaaccctaccgtaacaaagactcatata
gataacttatataagatggtatcattttgtgaaaataagacagattgtcgcagagcacaa
caacttcattactttggagaaatgtttgaccgacaacaatgcattgcaaacaaagctaca
tcatgtgacaattgtagatgtaaagatgatttcactatgttagacacaacagatgaagca
aaacatattttgagagctgtacgtgacattaatcaatcaagaaattctaatcttacatta
gtacttcttacagacatatttaaaggaagtgacctcaaaaaactaagggaatcaggtctt
actaagaatcctttatacggccgtggaagatcatggaataggcacgatatagaacgttta
cttcattatatggtactcaaagaatatttacaggagcagatgtatataaacaatgaaatt
gcttgtgcgtatctaaaaattggaccgaatgccagtgaactcatgacaaaaaaagatata
aaggtaatgcttcctatgaaatcgtccaataatagtactactgctgtagcaacagtatct
acagttacgaaaaagattgacaaagtacttctggaactacaacaacgatgttaccaagaa
ttgatggaaataataaaaggaattgctggagcgctcgatatttcagcatcttcggttatg
aatatgattgcaattagggcaatgagtcaaaatctcccagatagtgaagaagctatgtta
cgaattccacatgtaactaaagcaaatttcgaaaaatatggaaaagcactattagatatt
acacaaaaatatgctgcagagaaatatgtattaatgaatgaagagaaagaagacagtaat
aacgacgctgatgatgatacatggtataacgatactactacttttaccgctaaatccaac
acagtccgtggtagaaaacgtaaatgtaaaaatagttaccgaaatacaaacaaaaagtac
aagcggacatcgtcaaattcgcgaagaggaaaagcaacaacaaaagtaaaaaatacaacc
acatactcaaataaaggcccaggacttgtgagtttcagttaa
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