KEGG   Bombus affinis (rusty patched bumble bee): 126915065
Entry
126915065         CDS       T09368                                 
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
baff  Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:baff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:baff03400]
    126915065
Enzymes [BR:baff01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     126915065
DNA repair and recombination proteins [BR:baff03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    126915065
SSDB
Motif
Pfam: POLQ_helical DEAD HTH_61 Helicase_C ResIII HHH_5 AAA Sec7-like_HDS SMMA_C
Other DBs
NCBI-GeneID: 126915065
NCBI-ProteinID: XP_050575370
LinkDB
Position
4:12553999..12559087
AA seq 995 aa
MDDTMLIDIEDDDESKMCALSPNIHEKTLNSLAHEWSSCDIFERNENDIKIQYVVNEEEE
EKEKDLETEIVKQNTSTFSQNETDTHWQDNTFLNAFTQLDSYDVKDNVLECFKQVTQNVE
NCLEETLPTEIISSVHVTNNEQQNIKSLKRNSIDYSNAIPHKICHLNDKMTKQSTNIHRK
SSINNDTFYGLPNKAKELFLRIRGISTLYQWQDDCLNLDAVKNRKNLIYALPTSGGKTLV
AEILMLQELICNKRNAIFILPFVAIVQEKVQAMTPFALELDFLVEEYAASRGTFPPKKRR
KKNSIYMCTIEKALGLINSLIEENRFNEIGIIVIDELHLLGESGGRGATLEVLLTKVLYI
SSNVHIVGMSATIGNLEEIATFLNADLYTANFRPVEIKEYVKCEENIWLLDLKTKDVLTD
MKKINYRYSNDAAMIDPDRIGGLVMDVIPKNSCLIFCSSRKNCENVALLLSKLLFKSLED
YKRDEKQKLLNALESEEGLCPILHKTIKLGVAYHHSGLTSEERRLLEDAFRAETLSVICC
TSTLATGVNLPARRVILRSPYVGNQFLNLSRYKQMTGRAGRAGMGDVGESILICKNNELE
RVTELLKSKMDDSLSTIHIDRDRGINNLILSAILLHIATTRCELHKIAKKTLLNIQQKRL
NVNVKQIVDDALTEFLKASVMKIKEKETNFDIFKPNVSIVFPSQTIPSNDTIVETKRKRI
LKLTNETELELCSLGRAAMKGCIDMQCAYTLYQDLKKAQEHLILIDYLHLLYLVTPYNLI
SQIKPTGTIYYDVVTGLSETQMKTARLLGINEVNIGKIRDGLMPKNVEPRVIHRFYITLI
LYDLWCQHAVYDIAEKYEINRGIIQNLLTAVSSFAFSVIRFCQELDEFWAFKDLLNVFSK
RLSYCCPLELEALMELPLVKIGRARQLYNAGFKTMQCIAKAQPMDLQEKIPYLSKKTARR
IIEAAKLRIMEKIEDLKEEREDILDGIHMNVLKGF
NT seq 2988 nt   +upstreamnt  +downstreamnt
atggatgatacaatgttaatagatattgaagatgacgatgaaagcaagatgtgtgctctt
agtcctaatatacatgaaaagaccttaaatagtcttgcacatgaatggagttcctgtgat
atatttgaaagaaatgaaaatgatattaaaatacaatatgttgttaatgaagaagaagaa
gaaaaagaaaaagatttagaaacagaaattgtcaaacaaaatacttcaactttttctcag
aatgaaacagatactcattggcaggacaatacatttttaaatgcattcacacaattggat
tcttacgatgtaaaagataatgttttggagtgctttaagcaggtaactcaaaatgttgag
aattgtttggaagaaacacttcccacagaaattataagttcagtacatgtaacaaataat
gaacaacaaaatatcaaatcattaaaaagaaattcaattgattatagtaatgcaatccca
cataaaatatgtcatttaaatgataaaatgaccaaacaaagtacaaacattcatcgtaaa
agttcaataaacaatgatacattttatggtctaccaaataaagcaaaggaacttttctta
cgaataaggggtattagtacattatatcaatggcaagacgattgtttgaatttagatgca
gtaaagaatagaaaaaatttaatttatgcacttcctactagcgggggtaaaacattggtt
gcagaaatactaatgttgcaagagcttatatgtaataaaagaaatgcaatatttatattg
ccatttgttgctatagtacaagaaaaagttcaagcaatgacaccatttgcacttgaatta
gattttttagttgaagaatatgcagcatcaagaggaacttttcccccaaaaaagcgtcgt
aaaaaaaatagcatatacatgtgtactatagagaaagcattgggtttaataaatagttta
atagaagaaaatcgttttaatgaaattggtattatagttattgatgaattacatcttctt
ggagaatctggaggaagaggagctacattggaagttcttttaacaaaagtattgtatatt
agtagtaatgttcatattgttggaatgagtgcgacaataggtaacttagaggaaatagca
acattcttaaatgcagatttatatactgcaaattttcgtcctgttgaaattaaagaatat
gtgaaatgtgaagaaaatatttggttacttgatttaaaaacaaaagatgtgctgacagat
atgaaaaagatcaattatcgttattcaaatgatgcagcaatgatagatccagatcgaatt
ggaggtttggtaatggatgtaattccaaaaaattcgtgtctcatattttgttcaagtcgt
aaaaattgtgaaaatgttgctctgttgttatctaaacttttattcaaatcattggaagat
tacaaaagagatgaaaaacaaaaattattaaatgcacttgaaagtgaagaaggtctttgt
cctatcttacacaaaaccataaaattgggtgtagcctatcatcactctggccttacatct
gaagaaagacggttattggaagatgcttttagagcagagactctttctgtaatatgctgt
acatcaacactagcaactggagtaaatttaccagcaagaagggtgatattaagaagtcca
tatgttggcaatcagtttctaaatttaagtagatacaaacaaatgacaggaagagctggt
cgtgctggtatgggagatgtaggagaaagtatactaatatgcaaaaataatgaattagaa
agggtaacagaacttttgaaatctaaaatggatgattccttaagcacaatacatatagac
agagacagaggtataaataatttaattttaagtgctatattattacatatagcaacaact
agatgtgaactacacaaaatagcgaaaaaaacattacttaatattcaacaaaaacgttta
aatgtgaatgttaaacaaatcgtggatgatgcactaactgaatttttaaaagctagtgta
atgaaaataaaggaaaaagagacaaattttgatatattcaaaccaaatgtaagcattgtt
tttccatcacaaactataccttctaatgacacaattgtagaaacaaaaagaaaaagaata
ttaaagcttactaatgaaactgaattagagttatgtagtctcggacgtgcagctatgaaa
ggttgcattgatatgcagtgtgcatatacattgtaccaagacttaaaaaaagctcaggaa
catttaattcttattgattatttgcatcttttatatcttgttactccttataatttaata
tctcagataaagccgacaggaacaatttattatgatgtggtaactggtttatcagaaaca
caaatgaaaacagcaagacttctaggaattaatgaagtaaacataggtaaaatacgtgat
ggattaatgcctaagaatgtggaaccgagagtgatacatagattttatataacattaata
ctgtatgatttgtggtgtcaacatgcagtatatgatatagcagaaaaatatgaaataaat
cgaggtattatacaaaatcttttgactgctgtatcatcgtttgcattttctgtaattcga
ttttgtcaggaattggatgaattttgggcatttaaggatttattgaatgtgtttagtaaa
agattgtcgtattgttgccctttagagttagaggcattgatggaattgcctttagtcaaa
attggtagagcgcgtcagttgtacaatgccgggtttaaaacaatgcagtgcatagctaaa
gctcaaccaatggatttacaagaaaaaattccatatttaagtaaaaaaactgccaggcga
attattgaggctgccaaattacgaataatggaaaaaatagaagatttaaaagaagaaaga
gaagatattttagatggtatacatatgaatgtcttaaagggattttaa

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