Bombus affinis (rusty patched bumble bee): 126915141
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Entry
126915141 CDS
T09368
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126915141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126915141
Membrane trafficking [BR:
baff04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126915141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR5
zf_RING_Vps8
zf_RING_Vps8_fungal
WDR55
Beta-prop_THOC3
Beta-prop_EML_2
TPR_Vps41
zf-RING_Vps41
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
Clathrin
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
VPS18_RING_C
PQQ_2
Beta-prop_IP5PC_F
WD40_WDHD1_1st
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-RING_2
WD40
Motif
Other DBs
NCBI-GeneID:
126915141
NCBI-ProteinID:
XP_050575537
LinkDB
All DBs
Position
1:5266354..5272166
Genome browser
AA seq
1300 aa
AA seq
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MAENGLGSDAGSQEYLATEVINLDIEELDNTEYAIPAVEELPSLESILTEPDCASLSGTD
DDFGLTSGEKLGSSETTSVGSHLSLNSLNKSNKASQPTSSGAILRHVILKGISSQIISAS
EKVNAGLASAVAAGGNMLVVGTSHGLVLGFDSSQTLRWCDQEARHQGSVSALCFNHDGSR
ILAGFARGHILMIDSSNGKVLRTLTDVHPLDTAVLHVKFTDSPKVALCSDSGGSVFELNF
TRVMGVRGCDSRCLFSGSRGEVCTLEPLLLNHLPSHALKNYTLVAMATLSKVIVVCIRPR
MRVVLTHPLSGAPIAPPQLSWQLVVIQAADASRVIDPVLALARDDVVHFYQVCTEAGSRV
KLSPLRRMTLPYTISNLRWLNPRSLAVLDTQERLHLLDVRAQDNLETLDMSRVGISYASS
HFKGLSTGGNVSKAMALAGERACYNTVVTFGTQLLLLGTKSLHVVCIRTWTERLRHLTMQ
RRYPEALALGLSFYQDKGKAVVGLRGSKQRRKQIARDKVCQVLIQYMEELNHCLADENAE
FEIVTTCVDYCIQLENTDLLFGKLWDLVSESEGLKASYLHALENPLLDGSLRPRLPPLIA
QQLVTLYDQEEKVDSLQAIIVLLDVDCLDIHQVTTLCRQRGLWEALIHLQTTALGDFTAS
IHQLVPILQNMLTNSKDSLTRDSIQLGNALLVYASCCLAGRGFPRDELPEGMSQRAKTDV
LRALLSQHSSLANDTERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFTSEMGLRQRQRLID
ILLNIVMPSTPLSPRNPDYITDEQRNLVLIFIANEVAENTVNLEPSMLNKMIEILCTDSS
MGSSNELKTDKESAILGLLRSKKLRNISDNTLLNLAERANFMRVAELLYSARENWIAVCK
CMILHPSRHHDIWLWLKHLSPNSLQLVIMANATALVGINANQFAMLIATHLQNNVSEILQ
ILENTPILQYTLLEALYQIVQYKEEDIMLELTTEMLEKYLELMCKLQPDHVVEHIQGFHG
CRLNEALQIVQKANHKDAEAVMLEKLGNYQDAFDILLKEFQNNLELYCQNKVSENASIHS
AIQLAGICRRSAGNLDWMPLVETILQTHSNSTNKEVEKLSGKLLRIALEFLSGTTALSTV
LEQILKHPLATSGTIGDIRKLLSGVLTHSRYEQTLVETTARLVSLELHKALKKSLRDAGR
ACASVSVICSICRHLLSQCTEYIIVFSCGHGFHSECLGEPKSCYKCLKSKGWAPIVTNIT
HTTKSFHEHKQILPPEFMRNKDLSLRLAPPTSLPDLEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgggttggggtcggatgctgggtctcaagaatacctcgcaacagaggtt
attaatttagatatcgaagagttggataacacagaatatgctataccagctgtggaagaa
ttaccctccttagaaagtatattgaccgaacctgattgtgcatcgttatctggaacagat
gatgactttggtttaacatcaggtgaaaagctagggagtagtgaaacaacaagtgttggg
agccatttatccttaaactctttaaataaatcaaacaaagcttcacaaccaacgtcctct
ggtgctattttgagacatgttatattaaaaggaatatcatcacaaattatatcagctagt
gagaaggttaatgctgggttagcaagtgcggttgctgctggagggaatatgttagtagtt
ggaactagtcatggtctggtattaggttttgattcttcacagacattaagatggtgtgat
caggaagcaaggcatcaaggatctgtatctgcattatgtttcaatcatgatggaagcagg
atattagctggatttgctagaggacatatattaatgatagatagttctaatggaaaagta
ttaaggacacttactgatgtacatcctcttgatacagctgtgttacatgttaaatttaca
gattcaccaaaggtagcattatgtagtgatagtggtggatccgtttttgaattaaatttt
acaagggttatgggtgtaagaggctgtgatagcaggtgtttatttagtggatctagaggt
gaagtgtgtacattagaaccattgttattgaatcatctgccgtcacatgctctgaaaaat
tataccttagtggcaatggcaacattatcaaaggtaatagtagtttgcataagaccacga
atgcgtgttgtgttaactcatcctttatctggtgcacctatagcaccaccacaactatct
tggcagcttgttgtcatacaagcagcagatgcttctcgtgtaattgatcctgttctggct
cttgcaagagatgatgtggttcatttttatcaagtatgtactgaagctggttcaagagta
aaattatctcccttaagaagaatgactcttccatatacaataagtaacttacgatggtta
aatccgaggtcattagcagtattggatactcaagaaagattacatttattagatgtaaga
gcacaggataacttggaaactttagatatgagtcgcgttggtatttcatatgcatctagc
catttcaaaggtctgtccactggtggaaatgtttcaaaggcaatggcattggctggtgaa
agagcatgttataatactgttgtaacatttggtactcaacttttactattgggtaccaaa
agtttacatgtagtctgtatacggacatggactgaacgattgcgacatttaacgatgcag
agaagatatccagaagcattagctttaggactttctttttatcaagataaagggaaagca
gttgttggtctacgtggttcgaaacaacgtcgtaaacaaatagctcgcgataaagtatgt
caagttttgattcaatatatggaagaattgaatcactgtcttgcagacgaaaatgcagaa
tttgaaatagtcacaacttgtgtagattattgtatacaactagaaaatacagatttatta
tttgggaaattatgggacttagtttcggagtccgaaggattaaaagcgagttatttacat
gccctcgaaaatcctttattggatgggagtttacgaccgcgactaccaccattaatagct
caacagctagttaccctttacgatcaagaagaaaaagtagattcgcttcaagcaattata
gtgttattagatgttgattgtttagatatccatcaagtaacaacactttgtcggcaacga
ggtctctgggaagctttaatacatcttcaaacgacggcattaggtgactttactgcttca
attcatcaattagtaccaatattacaaaatatgttaacgaattcaaaggattcgttaact
cgagatagtatacaacttggcaatgcacttttggtctatgctagttgctgtcttgccggt
cgtggttttcccagagatgaacttcccgagggtatgtcccaaagagcaaaaacagatgta
ttaagagcattgctttcacagcattcgagtttggctaatgatacagaaagacaatatccg
tatctaagaactttgctacagtttgacgcaaaaggattcctcgacgtgatagcaattgcc
ttccaagagccggaatttacgtctgagatgggtctcagacaacggcaaagacttatagat
atattattaaatatcgttatgcctagcacaccattaagtccaaggaatcctgactatatt
actgacgaacaaagaaatttagttcttatatttatagctaatgaagttgcagaaaatact
gttaatttagaacctagtatgttaaataaaatgatagaaatattatgtactgactcaagt
atgggatcatcaaacgagcttaagactgataaagaaagcgcaatactgggattattgcgt
tcaaaaaaattgcgtaatatatcggataatactttacttaatttagcagaaagagccaat
tttatgcgtgttgcggagttgctgtatagcgccagagaaaattggattgcagtttgtaaa
tgtatgatattgcatccatctagacatcatgatatttggctctggttaaaacatctttct
ccaaattcgttgcaattagtcataatggcaaatgccacagctctagtgggaattaatgca
aatcaatttgctatgttgatagcaacacatttgcaaaacaacgtttctgaaattttacaa
atactagaaaatactccaatcttacaatatactttactagaagctttatatcaaatagta
caatacaaagaagaagatattatgttagagcttacgactgaaatgttagaaaaatatttg
gaattaatgtgtaaattacaaccagatcatgttgttgaacatattcaaggatttcatggt
tgtagattaaacgaagcattgcaaatagttcagaaagcgaatcacaaagatgctgaagca
gtaatgttagaaaaattgggaaattatcaggatgcgtttgatattcttttgaaagaattt
caaaataatttagaattgtattgtcagaacaaagtatcagaaaatgcatcaattcacagt
gcaatacaattagcaggaatatgcagacgatctgcaggaaatttagattggatgccactt
gtggaaactatacttcaaacacattcaaatagtactaacaaagaagttgaaaaattaagc
ggaaagttattaagaattgcactagaatttcttagtggaacaacagcattatcgaccgta
ttagagcaaatattgaaacatccattggcgacaagtggaacaataggtgacataagaaaa
ttattatctggagtacttacacattcccgatatgaacaaactttagttgaaactactgca
cgtttggtcagtttggagcttcacaaggcactgaaaaagtcgcttagggatgcaggaaga
gcttgtgcaagcgtatcagtaatctgctcaatatgtagacatttgttatcacaatgtacg
gaatatataatagttttcagttgtgggcatggttttcattcggaatgtttaggagaacct
aaatcttgttataaatgtttaaagtctaagggatgggcacctattgttactaatatcaca
catactactaaatcattccatgaacataaacaaattctaccaccagaatttatgcgtaat
aaagatctttctctaagacttgcaccacctacttccttaccggatcttgagggtattttt
taa
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