Bombus affinis (rusty patched bumble bee): 126915228
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Entry
126915228 CDS
T09368
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126915228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baff03009
]
126915228
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
Pre-60S particles
RNases
126915228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
126915228
NCBI-ProteinID:
XP_050575654
LinkDB
All DBs
Position
1:complement(4942378..4946484)
Genome browser
AA seq
689 aa
AA seq
DB search
MKNLTTKQLQRIEKKKKKMAALLEITKLNDKDREAKMLALKKASTEADQSNANDTDSGEV
SMEDNVTRKRPCNEDLNETLLEDSTKKENVGDTEESDTLANKKPRLSGDEYLKLKQELRE
RKKKLKTIPRFHLKVAGESASLTINVKSENRIPIFLSDIQHLLLYSLHGHHSPYVPARWC
HLEKYNRVTHTVVLVVEGLSLYHFMAYESMFPHITSKLEHRVEVVTPTAYGGSVIEDLAA
VPITGMQSDKLLKQYGSLEAALQSNSDVIKLLLTVFPMHRDPSTNAEKFKTEYGLPKTDK
FPRTLLLLSLCQMVEENYPVPLKGELAKKYGNYIMTKDVYVEANEKSPMFGLDCEMCKTT
IGELELTRISLVDESMNVIYDSLVKPDNRIIDYLTQFSGITKEMLEGVTTTLSDVQQTLR
KLLPADAILVGQSLNSDLHTLKMMHPYIIDTSVIFNITGDRYRKTKLQILAREFLGERIQ
ESSSGHCSTQDSQASMKLVQLKLANSVDYGDAVLLGRCNMEILKMKPENRTDNQQSLKLE
IRKYATSIFKHVTKDQKTAAIVGNGEVMNEYSKYLTSSINIMDDENFDKNDQVRLVVADN
NKQAVLRATQIVMEHAFTLCHVRIGQEKLKSDKIEKTFRTVNKWVHKLWQHMAVNGLACV
IFAGENNAANGACFLNLKREIPEDYTIRT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctaacaacaaaacaattacaaagaatagagaaaaagaaaaagaagatggct
gcacttctggaaataactaaattaaatgataaagatagagaagccaaaatgcttgctctt
aagaaagcttctacagaagcagatcagtcaaatgcaaatgatacagacagcggtgaagtc
tccatggaagataatgtcacacgtaaacgtccatgtaatgaagatttaaatgaaactctt
ttggaagattctactaaaaaagaaaatgtaggagatacagaagaatcagatacacttgct
aacaaaaagcctagattaagtggagacgagtatctaaaattgaaacaggaattaagagaa
cgtaaaaagaaacttaaaacaatacctcgatttcatttaaaagtagctggtgaaagtgct
agtttaactattaatgttaaaagtgaaaacaggattcctatctttcttagtgatatacaa
catttattattgtattcattacatggtcatcactcaccttatgtgccagcaagatggtgt
caccttgaaaaatataatagggtcacacacactgtggttcttgttgttgaagggctttcg
ctgtatcattttatggcttatgaaagtatgtttccacatataacatcaaagttggaacat
agggtagaagttgtaacacctacagcatatggagggtctgtaatagaggatcttgcagct
gtacccataaccggaatgcaaagcgataaattacttaaacaatatggatcattagaggct
gcattacaaagtaacagcgatgtaataaaattattactaactgttttcccaatgcataga
gatccatcaacaaatgcagaaaagtttaaaacagaatatggcctcccaaagactgataaa
ttcccccgtacactattacttctatctttatgtcaaatggtagaagaaaattatcctgtc
ccattaaagggtgaactagcaaaaaaatacggaaattacataatgacaaaggatgtttat
gtagaagctaatgaaaaatctccaatgtttggtctagactgtgaaatgtgtaaaacaact
attggagaattggaattaacgagaatatctctcgtggatgaaagtatgaatgttatttat
gatagtctggtaaaaccagataatcgtatcattgattatcttactcaattcagtggtata
acaaaagaaatgttagaaggtgtcacaactacgttgtctgatgttcaacaaacgttacga
aagttacttcccgcagatgcaattctagtaggacaaagtttaaattctgatcttcataca
ttaaaaatgatgcatccatacattattgatacatctgttattttcaatattactggtgac
agatatcgaaagacaaagttacaaattttagcaagggagtttcttggtgaaagaatacaa
gaaagtagttctggtcattgttcaactcaagattcacaggcttctatgaaattagtgcaa
ttaaaattagcaaatagtgtggattatggagatgctgtgttacttggtcgttgcaacatg
gaaatattgaaaatgaaaccagagaataggacagataatcagcaatcgttaaaacttgaa
atacgaaagtatgctacatcaattttcaaacatgtcacgaaagatcaaaaaactgccgct
attgtgggtaacggagaagttatgaacgaatattctaaatatttaacttcttctatcaac
attatggatgatgaaaatttcgataaaaacgatcaagtacgtcttgtagtggcagacaat
aataaacaagccgtcctgcgagctacacaaatagtcatggaacatgcctttactttatgt
catgttaggataggacaagaaaaattaaaaagtgataaaatagaaaagacgttccgtact
gtaaataaatgggtacataaattatggcagcacatggcagtgaatggtttagcatgtgtt
atatttgcgggagaaaataatgcagcaaatggtgcttgttttttgaatctgaagagagaa
atacctgaagattatacaatacgcacttaa
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