Bombus affinis (rusty patched bumble bee): 126915263
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Entry
126915263 CDS
T09368
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03030
DNA replication
baff03410
Base excision repair
baff03420
Nucleotide excision repair
baff03430
Mismatch repair
baff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126915263
03410 Base excision repair
126915263
03420 Nucleotide excision repair
126915263
03430 Mismatch repair
126915263
03440 Homologous recombination
126915263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baff03032
]
126915263
03400 DNA repair and recombination proteins [BR:
baff03400
]
126915263
Enzymes [BR:
baff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
126915263
DNA replication proteins [BR:
baff03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
126915263
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
126915263
MMR (mismatch excision repair)
DNA polymerase delta complex
126915263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
126915263
NCBI-ProteinID:
XP_050575733
LinkDB
All DBs
Position
4:10720034..10726809
Genome browser
AA seq
1102 aa
AA seq
DB search
MNKKQFPTPSAVKRAKYRDDDEDDYPGSFEAELATMDEMEDEFGDMSQVIEEPPDVQLSK
AGKGGPAQENTYLKWSRPPPPELNPQKDALIFQQIEIDHYSGTPLPGMPGSNIPPVPIMR
MFGVTELGNSVCCHVHGFNPYLYVTAPQNFNEHHCKLFKEALNKAMLKDMRSNPENIQEA
VLAVERLYKQNMYGYTGNEKSLFLKITVALPRLVARCKKVVEEETILSEFNHCYSAFESN
IDFDIRFMVDTSVVGCSWIELPPKTWKLRQHNGHNLPFTSRCQLEVDIAWDAFIAHAPQG
EWSKIAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEAEPFLRNIFTLDTCAP
IVGCQVLSFEKEQKMLEKWADFVRQLDPDIFTGYNINNFDFPYLINRAKHLNVRDFYFLG
RIKNIKSVIKTQVLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFL
QEQKEDVHHSIITDLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIFIYMEMARVTGVS
ICSLLTRGQQIKVVSQLLRKTREKDYLIPVHRGQASDEQFEGATVIEPKRGYYSDPIATL
DFSSLYPSIIMAHNLCYTTLLKRNTQIKLKIDSDDITVTPSDSQFVKATLRKGILPEILE
SLLTARKAAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLDISASVT
AYGRTMIERTKQEVEGQYCISKGYKNDAVVVYGDTDSVMIKFGVKTVEEAMELGREAAEY
VSSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNCPLVAN
MMNACLQKLLIDRNPNDALNYAKQIISDLLCNRIDISQLVVTKELTKTDYAAKQAHVELA
AKMKKRDAGNAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNVPIDTNYYLENQLAK
PLVRIFEPILGEKAESLLLKGDHTRTKSVVTSKVGALSAFTRKKEICLGCKAVLTPEREK
MALCKYCEPKEAELYQTELYLGRKLEEKFCRLWTECQRCQGSLHQEVLCTNRDCPIFYMR
KKVQMELDTQMIRIERFGIPTW
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagcaatttccgacaccttccgctgtaaaaagagcaaaatatcgagatgat
gatgaagatgattatcctggttcgtttgaagccgaactggctactatggatgaaatggaa
gatgaatttggagatatgtctcaggttattgaagagccacctgatgtacaactaagtaaa
gcaggaaagggaggtcctgcacaagaaaatacatatttgaaatggagtagacctccacct
ccagagttaaatccacaaaaagatgcattaatctttcagcaaatagaaatagaccattat
agcggtacaccattgcctggaatgcctggcagtaacatacctcctgtaccaataatgagg
atgtttggtgttacagaattaggaaactcagtttgttgtcatgtacatggatttaatcct
tatttatatgtcacagcaccacaaaattttaatgaacatcattgtaaattatttaaggaa
gctctaaacaaggctatgttaaaagatatgagatcaaatccagagaatattcaagaggct
gtattagctgttgagcgattgtataaacaaaatatgtatggctacacaggaaacgaaaaa
tccttgtttttaaaaattacagtggcacttccaagactagtagcacgttgtaagaaagtg
gtagaagaagagaccattttatctgaatttaatcactgctatagtgctttcgaaagtaac
attgattttgatattagatttatggttgacacatcagtagttggatgttcatggattgaa
ttaccaccaaaaacttggaaacttcgacagcataatggacataatttaccctttacttca
aggtgtcagttggaagtagatattgcatgggatgctttcattgctcatgctcctcaagga
gaatggtcgaaaattgcaccatttagaattcttagttttgatattgaatgcgcaggtcgc
aaaggtatttttcctgagccaaatcatgatcccgttatacaaattgcaaatatggtgata
agacaaggagaagcagaaccttttttgcgaaatatttttaccctcgatacatgtgcaccg
attgttggttgccaagttttaagttttgagaaagaacaaaaaatgttagagaaatgggcg
gatttcgtgagacagttagatcccgatatttttacaggatataacataaataattttgac
tttccttatctgattaatcgtgcaaaacatctcaacgtgagagacttttactttcttggt
cgaataaaaaatataaaatcagtaattaaaactcaagtacttcaaagcaaacagatgggt
cgacgtgaaaataaatccattaattttgaaggaagagttccatttgatctattactggta
ttggttagagattataaattaagatcttatactcttaatgccgtttcatatcattttcta
caagagcaaaaagaagatgtccatcatagtattatcacggatttgcaaaatggtaatgcg
caaacacgtcgaagacttgccgtttactgtttgaaagatgcatatttaccgcttagattg
ttggataaattaatgtgtattttcatctacatggaaatggcaagagtcactggagtttcc
atatgtagtttactaactcgggggcaacaaataaaagttgtgtcgcaattattacgaaag
actcgagaaaaagactacttaatcccagtccatcggggtcaagctagcgacgaacagttc
gaaggcgcaacagttatagaaccaaaacgcggatattatagcgatcctattgcaactttg
gatttcagttctctgtatcccagtattatcatggcgcataatctatgttacactacatta
ttaaaacgcaatacgcaaattaaacttaaaattgattcagatgacattactgtaactcca
agtgactcacaatttgttaaagctactcttagaaaaggaattcttccagaaatcctagaa
agtcttttgacagctagaaaagcagcaaaagctgaactgaagaaagaaaccgatccattg
aaacaaaaggttttggatggtagacaatatgctttgaaagtatctgctaattctgtgtat
ggtttcactggtgcgcaaatggggaaattaccctgtttagacatttctgctagtgttacc
gcatatggacgtactatgatagaacgaacgaagcaagaagtagaaggacaatactgcatt
tcgaaaggatataaaaatgacgcagtagtcgtatacggagatactgactcggttatgata
aagtttggtgtgaaaacagtcgaagaagcaatggaacttggccgtgaagcagcggaatat
gtgtcctcaaagtttttgaaaccgataaaactggaatttgaaaaagtatactttccatac
ctgttaattaacaagaaacgatacgctggtctatattttactcgtccagacaaatacgat
aaaatggattgtaaaggtttagaaactgtacgaagagataattgtccattagtagcaaac
atgatgaatgcttgtttacaaaaattactgattgatagaaatcccaatgatgcgctgaat
tatgcgaaacagattataagcgatcttttatgtaatcgtatagatatctctcaattagta
gttacaaaagaattaactaagactgattatgcggctaagcaagcgcatgttgaattagca
gccaaaatgaaaaaacgagatgctggaaatgcgccaaagcttggtgacagagttccatat
gttttcatacgagcagctaaaggcacaccggcttatcaaaaggctgaagatcccatctat
gtcttagaaaataatgttcctatagatacaaattattacttggaaaatcaattagccaaa
ccattagtacgtatttttgaaccaattctgggcgaaaaggctgaatcacttttgttgaaa
ggagatcatacgcgtacaaaatccgttgttacgtcgaaagtcggtgctctatctgcattt
acacgtaaaaaagaaatatgcttgggttgcaaagcagttttaacaccggaaagagaaaag
atggcattatgtaaatattgtgaaccaaaagaagcagaattatatcaaaccgaattgtat
cttggtagaaaattagaagaaaaattctgtagattatggacggaatgtcaaagatgtcag
ggaagtcttcatcaggaagtcctatgcacaaaccgtgattgtccaatattctacatgaga
aagaaagttcaaatggaattagatacacaaatgatacgaattgaaaggtttggaattcca
acatggtaa
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