Bombus affinis (rusty patched bumble bee): 126915344
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Entry
126915344 CDS
T09368
Name
(RefSeq) ecdysone-induced protein 78C isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126915344
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
baff03310
]
126915344
Transcription factors [BR:
baff03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
126915344
Nuclear receptors [BR:
baff03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
126915344
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ZFYVE21_C
Motif
Other DBs
NCBI-GeneID:
126915344
NCBI-ProteinID:
XP_050575895
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Position
4:16333828..16474395
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AA seq
545 aa
AA seq
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MDVFKIDQSLSAGLGSAPAPDTLTPEVSFDAGSEFNLSFFDGPEENSTQGFSDPGSVGSA
SASPPPGTPASIPVNPPNAALPIVQVPPGIVIKQEQHYAAADSNSSTPAKSFVACRVCGD
KASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLKDGNCLVIRISRNRCQYCRFKKCLAVGM
SRDSVRYGRVPKRSRERGPEDTVPTTTSTTTTTGVQQLTSPAGTNNNNNNTNNNNNNTSS
QNNNNNSQAQNAIPCVPPAAVVEADQSDADVKQLAVYDVILQVSQAHHAHCGFTEESTRG
IVRKPMIIPASTSSQPASPEDPEAASSTAETVESQRIWLWQQFATRITPSVQRVVEFAKR
VPGFCDLSQDDQLILIKVGFFEVWLSHISKMTTDSSMTFEDGTYITRQQMELMYEPDFVS
ALMQFTSALNAHQLSDTELGLFSGAVLLGERPGLNDVKTVQRLQDRLLEALKVQALRNHT
VSGEATSAGGCSGVSSVSQRIPELRTLGARHANLLDWFRRNWTKLKLPPLFAEIFDIPKC
EEDLQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttcaaaatcgatcagtcgctgagcgcgggtctgggtagcgccccggcgcca
gacacccttacaccggaagtgtcgttcgacgctggtagtgaattcaatctgagcttcttc
gacggaccggaggagaacagcacccaaggcttcagcgatcccggttccgttggtagcgcc
agcgcatcgcctccacctggaacaccagccagcatccctgtaaatcctccgaacgccgcc
ctaccgattgtccaagtgccccctggcatcgtcattaagcaagagcaacattacgcggct
gccgattcgaacagttcgacgcccgcgaagagtttcgtggcctgtagagtttgcggtgac
aaagcgagcggttatcattacggcgtaaccagctgcgagggctgcaaaggcttctttaga
agaagcattcaaaagcaaatagaatacaggtgtctgaaggacggcaattgtttggtcatc
agaataagtcggaatcgctgccaatactgcagattcaagaagtgcctagctgtcggcatg
tccagggattccgttagatacggcagggtgccgaaacgttcgagggaacgcggccccgaa
gacacagtaccgaccaccacgtcaacgaccactaccaccggagtacaacaactcacgtcc
cctgctggtactaacaataacaataataacaccaacaacaataacaacaacaccagcagc
caaaacaataacaacaacagccaagcacagaacgctataccgtgtgtgccgccagctgct
gtggtagaggcagatcagtcagacgcggacgtgaaacagttggcggtttacgacgtgata
cttcaagtttctcaggcgcatcacgctcactgtggcttcaccgaggaatcaacgaggggc
atcgtccggaaaccgatgataataccggcgagtacttcttcgcagcccgccagtccagag
gacccagaggcggcatcctcgacagcagaaacagttgaatcgcaaaggatctggctttgg
caacaattcgccactaggataacgccatcggtacaaagggtggtggagtttgccaaaagg
gtgccaggattttgtgatctttcgcaggacgatcaattaattctgattaaggtcggtttc
tttgaagtctggctaagccatatctcaaagatgaccactgacagttcgatgacattcgag
gatggtacttatatcactaggcaacaaatggaattgatgtacgagccagacttcgtgtct
gctttgatgcaattcacttcggccttaaacgcccatcaactatcggacaccgaattgggc
cttttctccggcgccgtgcttctgggtgaaagaccaggtctgaacgacgtgaaaacagtg
cagaggcttcaggatcgtcttttggaggcgctgaaagttcaagcgttacggaatcacacg
gtttccggcgaggctacttccgcgggaggttgttccggtgtctcgagcgtctcacaaagg
ataccagaattaagaactctgggtgccagacatgcgaatctgctcgactggttcaggagg
aactggaccaagctcaaattgccacccctgtttgccgagatattcgacattcctaagtgt
gaagaagatcttcagtga
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