Bombus affinis (rusty patched bumble bee): 126915378
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Entry
126915378 CDS
T09368
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126915378
03036 Chromosome and associated proteins [BR:
baff03036
]
126915378
Spliceosome [BR:
baff03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126915378
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
126915378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
RRM_1
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
Lsm_interact
RRM_3
Motif
Other DBs
NCBI-GeneID:
126915378
NCBI-ProteinID:
XP_050575937
LinkDB
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Position
4:complement(2594488..2599472)
Genome browser
AA seq
906 aa
AA seq
DB search
MEEMDIGNEENNDKSSPEESVDNEKNKSIEIKDEPEEDMDNEVDDDQESEEDDEEDADEA
EVKALETSLAQNPYDYTSHVALINKLQKMGELERLRAARKNMSTKYPLSSELWLSWMRDE
IKLATIPEQKAEVVKLCERAVKDYLCVEVWLEYLQFSIGNMGTEKDAAKNVRQLFERALT
DVGLHTIKGAIIWEAFREFEAVLYALIDPSNQTERKEQLERIGNLFKRQLACPLLDMEKT
YEEYEAWRYGDGAEAVIDDKIVSGGYERALSKLNLRLPYEEKIVSAQTEEELLDSYKMYL
SYEQQNGDPGRITVLYERAITDLSLEMSIWLDYLKYLEENIKIESVLDQVYQRATRNVPW
CAKIWQKWIKSYEKWDKSILEVQTLLENALTTGFSTAEEYRNLWMTYLEYLRRRLDRCSS
DEKKQLDILRYAFNRACEHLAKSFGLDGDPNCIILQYWARTEAIHANNMEKARSLWADIL
SQGHSTTASYWLEYISLERCYGDTKHLRKLFQKALSSVKDWPESIANSWIDFERDEGTLE
QMELCEIRTKEKLDKVAEERQKTQQISNLELSPSQNKKAYKRKQKDTGKWKNLGAYPIKI
MKVETQLKPKIRESHLNFEKKDDVDIEEKEIAEVSKTKLNIPPPPGFKAPESEQMEIDYV
HEVDDKISVFISNLDYSVTEEEVRNALNPAGPITMLKMIRSYNGRSKGYCYVQLNSKEAV
DKALELDRIPIRGRPMFVSRCDPNKTTRESVFKYSCSLEKNKLFVKGLPVTTTKEDLEEI
FKVHGSLKEVRIVTYRNGHSKGLAYVEFVDENSAGKALLAIDGMKIGDKIISVAISQPPE
RKKDPIKSLGGSTVSRTTFGTPKTLLSMVPRTVKTAATNGSAIATGNGAVPKMSNQDFRN
MLLNKK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggatatagggaacgaagaaaataatgataagagttcacctgaggaatca
gtggacaacgaaaagaacaaatcaatagagattaaagatgaacccgaagaagacatggac
aatgaggttgatgatgatcaggagtctgaagaggacgacgaagaggatgctgacgaagca
gaggttaaagctttggaaacttctctcgctcagaatccgtatgattacacgagtcatgta
gcccttatcaacaaattgcaaaaaatgggcgaactagaacgattacgtgctgctagaaaa
aatatgagcaccaaatatccattgagttctgagctctggttgtcttggatgcgcgacgaa
attaaattagctaccataccagagcaaaaagctgaagtagtcaaactatgtgaaagagca
gtcaaggattatctctgtgtggaagtatggttagaatatttgcaatttagtattggtaat
atgggtactgaaaaagatgcagcaaagaatgttcggcagttatttgaacgagcattaaca
gatgttgggctacatactattaaaggtgcaataatatgggaagcgtttcgtgagttcgaa
gctgttttatatgcattgattgatccttcaaatcaaaccgaaagaaaagaacaattggaa
cgtattggtaacctattcaaaagacaattagcttgtcctcttttagatatggaaaaaacg
tatgaagaatatgaagcatggcgttatggagatggcgcagaagctgttattgatgataag
attgttagtggaggatatgaaagagcgctatcaaagcttaatctgcgtttaccatatgag
gagaaaattgtttccgcccaaactgaagaagaacttctagattcatataaaatgtattta
tcatatgagcaacaaaatggagatcctggacgaataactgttttgtatgaaagagcaatt
actgatctcagtttagagatgtcaatttggcttgattatctcaagtatttagaagaaaat
ataaaaattgaatctgtcttggatcaagtgtaccaaagagctacaagaaacgttccatgg
tgtgcaaagatatggcaaaaatggataaaatcatatgaaaaatgggacaaatcaatatta
gaagttcaaacattgttagaaaatgctttaacgactggattttctactgcagaagagtat
cgaaatttgtggatgacatatttagaatatttgcggcgaagacttgatcgatgctcttct
gatgaaaaaaagcagttagatatattacgttatgcttttaatagagcttgtgaacatttg
gctaaatcatttggtttagatggagatcccaattgtattatattacaatattgggcaaga
actgaagccatacatgctaataacatggaaaaggctaggtcattatgggccgacatttta
tcacaaggacattccacaacagcatcttactggttagagtatatttcattagaaagatgt
tacggagatacaaaacatttaagaaaattatttcaaaaagccttgtcgtcggtaaaagat
tggccagaaagtatagcgaattcttggatagattttgaacgagacgaaggaacactagaa
caaatggaactatgtgaaatacgaacaaaagaaaaattagataaagttgctgaagaaaga
cagaaaacacaacaaatttctaatcttgaattatcaccatcacaaaacaagaaagcgtat
aaaagaaaacaaaaagatactggtaaatggaagaatttaggagcttatccgataaaaatt
atgaaagttgaaacacagttaaaaccgaaaataagagaaagccatctgaatttcgaaaag
aaagacgacgttgatattgaagaaaaagaaattgctgaagtatccaaaacgaaactaaac
attcctccaccacctggttttaaagcaccagaaagtgaacaaatggaaatagattacgta
catgaagtggacgacaaaatctcagttttcataagtaatttagattatagtgtgactgaa
gaagaagtcagaaatgctttaaatccggctggaccaattacaatgcttaagatgatcaga
agctataatggacgtagtaaaggatattgctatgtgcaactcaattccaaggaagcagtt
gataaagctttggagttagatagaattcctataagaggacggccaatgtttgtttcaaga
tgcgacccaaacaaaacaacacgagaatctgtttttaaatatagttgttccctggaaaaa
aataagcttttcgtcaaaggacttccggtaacaacgacaaaagaagatcttgaagaaatt
ttcaaggttcacggatcattgaaggaagtccgtatagtcacttaccgtaatggccattct
aaaggactggcttacgttgaatttgtggacgaaaacagtgctgggaaggcacttctggcc
attgatggaatgaagatcggtgacaaaataattagtgtagccataagccaaccgcctgaa
cgcaaaaaggatcccattaagtctctaggtggttctacagtaagcagaactacatttggt
acgcctaaaacattattatctatggtacctcgtactgtaaaaactgctgctactaacggt
agtgcaattgcaactggaaatggtgccgttccaaaaatgagcaatcaagattttaggaat
atgttattgaataaaaaataa
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