Bombus affinis (rusty patched bumble bee): 126915712
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Entry
126915712 CDS
T09368
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126915712
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
126915712
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
INTS5_N
Motif
Other DBs
NCBI-GeneID:
126915712
NCBI-ProteinID:
XP_050576615
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All DBs
Position
1:2224110..2231507
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AA seq
1365 aa
AA seq
DB search
MEAIRFFNQKMTSEIQITTIVNDILKVEAIEEAFSCVLVHHPNSESEKIATWQTELSSAM
SNLSKEQQENAVRQFLSMAAAMTNHRRLQLLLSLLENLVASSVLPARLVCECILNCDKLQ
YQLEDFWVECFVLIRHIIGGVDYKGVREIMKGCKEKAQTIPSRLDASIQPQLKALENVIE
YIFDRNACLLPGYFIVTEIQKAYPDGKNWPHWKLAKLLSNFVESFRNTAQMVSIVGHSKM
LPVVEHTGYADLINPWVLDTTTLKFSLKGNLPYDEDLLKPQTELLRYVLEQPYSRDMVCS
MLGLQKQQKQRCIALEEQLVELVILAMERAENETLPAEGTDGTVANHYVWLHLSSQLIYF
VLFSYACFPSIVMAIHDKLAGRDLRKGRDHLMWVLLQFISGSIQRNPLSNFLPVLKLYDL
LYPEKEPLPVPDYTQALCTHQMAITCIWIHLLKKAQSEHSNIHRPIPHTLKLHHEFLQHL
VMPNTSLCMGSDYRIALLCNAYSTNQEYFGRPMAALVDTILGTQKGQQQQPMQTLQNNAA
LASGPTTPLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYT
EIESLGIKGFISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVP
QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARS
MHVTGTGSDSHSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFFQQNSVPKENKQQI
KKAVEEEYRNWASMSNENDIIAHFSVPGTPPLFLCLLWKIIFETDRISPIAYKILERIGA
RALSAHLRKFCDYLVFEFANSVGGQHVNKCVDTVNDMIWKYNIVTIDRLVLCLVLRTHEG
SDAQVCFFIIQLLLLKAIELRNRTQEFVKENSPEHWKQSNWHEKHLAFHRKFPEKFAPEG
IMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLEIPAVSKSLETLLEHLGCLYKF
HDRPVTYLYNTLHYYERKLRDRPGMKRRLVTAVFGSLKEIRAPGWALSEAYQMYMTRSID
EVIAWMPELDYYIRLVRRIVETMSGTAHFPATDWRFNEFPNPAAHALYVTCVELMAVPVA
ANIVANSLLDVVAKGYTVIPSDEIHLWINCVGLLLAALPECYWSALHDRLVATISSPGLA
NWNYSNLTPFQMFNFNNTHNSLLENKFSYMLALAHSVWHHAGVGQITTMPQFIKEKLQPV
VNSEEQLIYACHLIGPTLARFNAERPNCVVELTVRLYEMLEQVDRVQTHLKYMDPVCDLL
YHIKYMFVGDMMKNEVECIIRRLRPALQMRLRFIAHINIDEIQSS
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggaggccataagattttttaaccaaaagatgacgagtgaaattcaaatcactaccatt
gttaatgatattttaaaagtggaagctatagaagaagcttttagttgtgttctggtgcat
cacccaaacagtgaaagcgaaaaaatagcaacatggcaaacagaattatcatctgctatg
tcaaatttatccaaagaacaacaagagaacgcagtaagacaatttttatctatggcagca
gctatgactaatcataggagattgcaattattattgtcactacttgaaaacttagttgca
tctagtgttttgccagcaagacttgtttgtgaatgtatattaaattgtgataaacttcaa
tatcagttagaagatttttgggttgaatgttttgttcttattcgacacattattggagga
gttgattacaagggtgtcagagaaataatgaagggatgcaaagagaaagcacaaacaatt
ccatcgagattagatgcatctattcagcctcaattgaaagctttagaaaatgtaattgaa
tatatttttgatagaaatgcttgtttgttgccaggatattttattgtaactgaaattcaa
aaggcttatcctgatggtaaaaactggccacactggaaattagcaaaattgctttcaaac
tttgttgaaagttttcgcaatactgcgcaaatggtatctatagttgggcattcaaaaatg
ttaccagtagtggaacatactggatatgctgatttaatcaatccttgggtacttgatacc
acaacattaaaattttcattaaaaggaaatttgccttatgatgaagatttactcaaacca
caaactgaattactgagatatgtattagaacaaccttatagtagggatatggtgtgttcg
atgcttggtttacaaaaacagcaaaaacaacgatgtatagctttggaagagcaattggta
gaacttgtaattcttgctatggaacgtgcagaaaatgaaacgttaccggcagaaggaact
gatggaactgttgcaaatcattatgtatggttacatctctcatcacagcttatatacttt
gtacttttttcgtacgcttgtttcccgagtatcgtaatggcaatacacgataaattagca
ggaagagacttaaggaaagggagagatcacttaatgtgggtcttgctgcaattcatttct
ggaagtattcagagaaacccactatcaaactttttaccagtattaaaactatacgacctt
ctatatccagaaaaggaaccgttaccggtaccggattatactcaagcattatgcacacat
caaatggctattacgtgtatatggatacatttgctaaaaaaagctcagtcagaacactcc
aatattcacagaccaataccacacacattgaaacttcaccatgaatttttacaacattta
gttatgcctaacacttctctttgtatgggatctgattaccgcattgctttgctatgtaat
gcatattctacaaatcaagagtattttggtagaccaatggcagctttagtagatactata
cttggtactcaaaaaggtcagcaacagcagccgatgcagaccttacaaaataacgcagcc
ctcgcaagtggaccaacgacgccattatccatgtcaattttggattcattgactgttcac
tctaaaatgagcctaatacatagcatcgttactcacgttatcaaatcggcacaatccaaa
agcaatatggcattggcaccagcattggttgaaacttatagtagattactagtatacact
gagattgaaagtcttggcatcaaaggtttcatcagccaattgcttccaacagttttcaag
tctcatgcatggggaacattatatactcttttggaaatgtttagttataggatgcatcat
atacaaccgcattatagagtgcaacttttgtctcatttacatagccttgcagctgtgcca
caaactaatcaaacacaacttcatctatgtgtggaaagcactgctcttcgtttaattact
ggattgggatcagctgaagtgcaaccgcaattatctcgatttttatcagaacctaaaact
cttgtgtcagcagaatctgaggagttgaatagagctttagtattaacgctggcacgttct
atgcacgtaacaggaactggatcagacagtcacagtggaacatggtgcaaggaattgttg
aacacaattatgcagaataccccacactcgtgggctaatcacactcttcaatgttttcct
ccggtgttaagcgaattttttcagcaaaatagcgtaccaaaagaaaacaaacaacagatt
aagaaagcggtggaagaagaatatcgaaattgggcttctatgagtaatgaaaatgatata
atagcacacttttcagtacctggtacaccacctctatttttatgccttttgtggaagatt
attttcgaaactgatcgaattagtccgatcgcgtataaaatcttagaacggattggagcc
cgagctttgtcggcacatctccgaaaattctgtgattatctcgtatttgaatttgctaat
agcgtgggtggacaacatgtaaataaatgtgtagatacagttaacgatatgatatggaaa
tacaatattgtaactattgatagattagttctttgtctggtactaaggactcacgaaggc
agtgacgcgcaagtatgcttttttataattcaattattgttattaaaagctattgaattg
agaaacagaacccaagagttcgtgaaagaaaattctccggagcattggaaacaatcgaac
tggcatgaaaaacatcttgcatttcatagaaaattcccagagaaatttgctccagaaggt
attatggaacaaactagcggaggacctagtcaatatcaaagtttgccagtttattttgga
aatgtatgcttacgatttttgcctgttttcgatatcgttgtacataggtatttggaaata
ccagctgtgtcgaaaagtttagaaacattgctagaacatttaggatgcttatataaattc
catgatcggcctgttacgtacctttataatactttacattattatgaacgtaaattaaga
gacagaccaggtatgaaacgacgattagtgacagctgtttttggttccttaaaagaaatt
agggcaccaggatgggcactctcagaagcttatcaaatgtacatgactcgatctattgat
gaagttatcgcatggatgccagaattagattattatatccgcttagtacgaagaattgtg
gaaacaatgtcaggtacagctcattttcctgctactgattggagatttaatgaatttccc
aatcctgctgcacatgcattgtatgttacatgcgtcgaacttatggctgtccctgttgct
gcaaatatagttgccaattcattattagatgtagttgcaaaagggtacacagtgataccg
tcagatgaaattcatttatggataaattgtgtgggtttgttattggctgctttaccagag
tgttattggtcagcccttcatgaccgattagttgcaactattagcagtccaggtctagct
aattggaattacagtaatttaactccatttcaaatgtttaattttaataacacgcataat
agtttattagaaaataaattcagttatatgctggcattggcacattctgtgtggcatcat
gccggtgttggacaaataactactatgcctcaatttattaaagagaaacttcaaccagtt
gtaaatagcgaagaacaattgatatatgcgtgtcatttaattggacctactttagcaaga
tttaatgctgaaaggccgaattgtgtcgtagaattaacagttcgtctatatgaaatgctt
gaacaagtcgatcgagttcaaactcatctaaaatacatggacccagtttgtgatttacta
tatcatataaagtacatgtttgtcggggatatgatgaagaacgaagtggaatgtattata
cgaagactaagacctgctttgcaaatgaggctacgatttattgctcacataaatatagac
gaaattcagtcttcctga
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