Bombus affinis (rusty patched bumble bee): 126915804
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Entry
126915804 CDS
T09368
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126915804
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126915804
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126915804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
DEAD
OB_NTP_bind
HA2_C
AAA_22
nSTAND3
AAA_19
HA2_N
ATPase
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
126915804
NCBI-ProteinID:
XP_050576769
LinkDB
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Position
4:14861367..14866466
Genome browser
AA seq
1159 aa
AA seq
DB search
MSSRYKSNNKFRHKYQYDDEQKKSKYDSKLPYSTDYDKKGILDQKSDFSQEITNKNTEDF
YFNKYKHELNKIFSGNLNVIQDTDDFWKFVNKYETVQKKLKTPDILPNFSLNTIGVPETY
HKLHCINFKLSYNFNELFARVMPVKALTKERLLKFQNIIILYLDFKQKEKFTKLKKLRKS
QVNLPVYQYKHEIIETIKQEQVVIIAGDTGCGKSTQVPQYLYAAGFQKIACTQPRRIACI
SLAKRVAFETLTENCNDVGYQIRFEKQRNQNTKITFITEGLLLRQLSGEFELLPYDVIVL
DEVHERHLHGDFLLGIMKCIINQRQDLKLVLMSATINIELFNNYFSKENVKVIQVPGRLY
PIQLLYRPVTIEDIRYKNDRFNPSPYIQIMQIIDQKYPAEEKGDLLIFLSGMSEITAVVD
AAKEYSQKKNNWIILALHSTLAISEQDKVFDFAPEGVRKCIVSTNIAETSITIDGIRFVA
DSGKVKEMSYDPSCKMQRLKEFWISKASAEQRKGRAGRTGPGVCYRLYSEEEYMSLEKYS
TPELQRVPLDSLLLQMIAMGLPDARKFPFIEPPSPENIENSILSLKEHGALTDNEKITCI
GKTLARLPVDITIGKMLIMGSIFHQVEPVLSLAAALSIQTPFTNRAYRDSECETSRKKLE
SDHGDPITLLNAFREWLEVKQQSSQESRGSGNSSRKWCKRRGLEEQRFYEMTKLRAQFKE
LLQDCKLLRSLPEPNSSMSSAERAIRHGELKLLKSLKRTYKQSEPRKRKQLKLESFDIQL
EDNDHDDGEIDIKDIEFRMKNDPNQVQNLLTAATACSYKDLTMLKLILCSGLYPQFACAD
EFNYCKTTNEQLFHTKAKPYIALHPMSFFGNHPQVLQLEEADIVSIPGFKSKTAVSPKHT
ILTYLSLLETTKPYLVNTLRMPAAQTLLLFTREIDTNSTFSIIVCDSWLELKFPIPDSGQ
ILLMKATKLRHKWDFLLNQQLQDSSTSNDENQDFSEFEYTLTRDLIEYMHTTVPYTLKRL
LPADLKTIYVGCGENNILIDPNPFQSDFVVIPNSIKGGVHVTNTITYNCVKETEWSDQLS
TEILVTQWHCSNCNMQAILTSIEKLQHQQSCVKADIKDVEKHDNIKRKPNAQAYECPDCA
QILYLTPIEILKHKKSHVK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgatacaaatctaataataaatttaggcataaatatcaatatgatgatgaa
caaaagaaaagtaaatacgattcaaaattgccatacagtacagattatgataaaaaaggg
attttggaccaaaaaagtgatttttctcaagaaatcactaataagaataccgaagacttc
tattttaataaatataagcatgaattgaataaaatattctctggaaatttaaatgtaatc
caggatactgatgatttttggaaatttgttaataaatatgaaactgtacagaaaaaacta
aaaactccagatattttacctaatttttcactaaatactatcggtgtgccagaaacatac
cacaaattacattgcataaatttcaaattaagttataattttaatgaattatttgcacgt
gtaatgccagttaaagcattaacaaaagaacgcttattaaagtttcagaacataattatt
ttatatttagactttaagcaaaaagaaaaatttaccaagctaaaaaaactcaggaaatca
caagtaaatctaccagtttatcaatataaacatgaaattattgaaacaataaaacaggaa
caggtagttataatagctggtgatactggttgtggaaaatccactcaagtgcctcaatac
ttatacgcagcaggttttcaaaaaattgcttgtacccaaccaagaagaatagcttgtata
tctttagcaaaacgtgttgcttttgaaacattaacagaaaactgcaatgatgttggttac
caaattcgttttgaaaagcaaaggaatcaaaataccaaaattacatttataacagaaggt
cttttgttaagacagttatctggagaatttgaattattaccttatgatgtaattgttttg
gatgaagtgcatgaacgtcacctacatggagattttcttcttggtattatgaaatgtatt
attaatcaaaggcaagatctaaaattagtacttatgtctgctacaattaatattgaactt
tttaataattatttttcaaaagaaaatgttaaagtaatacaggttcctggaaggttgtat
cctattcagttattgtacaggcctgttactatagaagatattcgatataaaaatgataga
ttcaatccaagtccttatatacaaataatgcaaataattgatcaaaaatatccagctgaa
gaaaaaggcgatttattaatatttttaagtggaatgagtgaaattactgcagttgtagat
gcagcaaaagaatatagtcaaaaaaagaataattggattatcttagcacttcacagcact
ctagctattagtgagcaagataaagtatttgattttgctcctgaaggagtgagaaagtgt
attgtatctactaacattgctgaaacttctattactatagatggaataagatttgttgct
gacagtgggaaagtaaaagaaatgagttatgacccatcatgcaaaatgcaacgactcaaa
gaattttggattagtaaagctagtgcagaacaacggaaaggaagagctggtagaactgga
cctggagtatgttatagattatactctgaagaagaatatatgtctttggaaaaatactca
actcctgaattacaacgtgtacctttagattccttacttctacaaatgattgcaatggga
cttccagatgcgcgaaaatttccattcatagaaccaccttcaccagaaaacattgaaaat
tctatattatctttgaaagaacatggtgcgctaacggataatgaaaaaataacatgtatt
ggaaaaacacttgcacgcttacctgttgatataacaatagggaaaatgttaataatgggt
tctatttttcaccaagtagaaccagtcttgtcattagctgctgccttaagcatacaaaca
ccatttacaaatagagcatatagggattcagaatgcgagacatctaggaaaaaattggaa
tctgatcatggtgatccaataacattactaaatgcatttagagaatggttagaagtaaaa
caacaaagttcgcaagaatccagaggtagtggtaacagtagtagaaaatggtgtaaaaga
agaggtttagaggaacagagattttatgaaatgacaaaattgagagcacagtttaaggaa
ttacttcaggattgcaaattactgagaagtctcccagaaccaaattcttctatgtccagt
gcagaacgcgctataagacatggagagcttaaacttttaaaatcattaaaaagaacctac
aaacaaagtgaacctagaaagcgaaaacaattaaaactagaatcatttgatattcaatta
gaagataatgatcatgatgatggtgaaattgacataaaagatatcgaatttcgaatgaaa
aatgatccaaatcaagtgcaaaatctattaacagcagccactgcatgtagctataaagat
ttaacaatgttaaaattaatactctgcagtggtttatatccacaatttgcatgtgctgat
gaatttaattattgtaagacaacaaacgagcaactgtttcatacaaaagcaaaaccatat
attgctttacacccaatgagtttctttggaaatcatccccaagtattgcaattggaggaa
gctgatattgtatcaataccaggctttaaaagtaaaactgccgttagtccaaaacataca
atattaacatatttatctcttttggagacaacaaagccttatctagtgaatacacttaga
atgcctgctgcacaaacattacttttatttacacgtgaaatcgacacaaatagtacattt
tcaataatagtatgtgattcctggttagaattaaaatttcctatacctgatagtggtcag
attttactgatgaaagctaccaaattacgacataaatgggatttcttattaaatcaacaa
ttacaagattcaagtaccagcaatgatgaaaatcaggatttcagtgaatttgagtataca
cttactcgagatttaattgaatatatgcatactactgttccatatacactaaaacggctt
ttaccggctgatcttaaaacaatatatgtgggatgtggtgaaaacaatatattgatagat
ccaaatccttttcaatcagattttgtagtaatacccaactcaattaaagggggagttcac
gtaacaaacactattacatataattgtgtgaaagaaactgaatggagtgatcaactttct
acagaaattttagtaacacaatggcattgttcaaattgtaatatgcaagcaattctaaca
agcatagaaaaattacaacaccaacaatcctgtgttaaagcagatataaaagatgttgaa
aaacatgacaatattaaacgtaaacctaatgcacaagcatatgaatgtcctgattgtgca
caaatattatacttgacaccaattgaaattcttaaacataaaaaatctcatgttaaataa
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