Bombus affinis (rusty patched bumble bee): 126915939
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Entry
126915939 CDS
T09368
Name
(RefSeq) helicase domino isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126915939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
baff03036
]
126915939
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
126915939
SWR1 complex
126915939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
DEAD
Motif
Other DBs
NCBI-GeneID:
126915939
NCBI-ProteinID:
XP_050577095
LinkDB
All DBs
Position
5:complement(15385925..15407741)
Genome browser
AA seq
3151 aa
AA seq
DB search
MSDKQTAPILPPLNGGGGNNGGSNGGAPQQTVNLQQVLATAQGLNVLTTGAGQQFVITSQ
VPGLTQVIPSNPTTNTNIQQVGVTRIVNISGTPPRAGTVGVAGASSSPLTSPTRQGSPKV
VLATSPKLVRTSIGNMFVAPTSQASMHSPPARKKLKLTDSTEKHTMLADDAMGYRRRIME
HKMKKMRAIRERYAENASELFFLHAGGNMMDFQTWRKKPPTPQYLHFLRQHRLDPDDDDE
DLTAPLPAISEIPLTPTATTVSTIVPVNQCTEVKISGMNVAPVAVSTTLPAAVAQLNQQG
HVPGRPQGGRHGMVLAFRAAIQSSPVTAHLPPTSSTLAPTLIIGNAPIVPGSPKPVATTV
TSPVIDKSTIATSITTTITTMTTPTLTFTGTTTTTATVTTVTKTSSAPTIPTQPVVKLVK
LPASNAATSCDITNNQEQIVEKAKQEAYVMQRIAELQREGLWSERRLPKVQEPPRTKAHW
DYLLEEMVWLAADFAQERKWKKAAAKKCARMVQKYFQEKAIQAQKAEKSQELRLKKIASF
IAKEIKTFWTNVEKLVEYKQQTRLEEKRKQALDQHLNFIVGQTEKYSTWLTEGLNKTDGP
QSVPASMNSSRISSPIPPGKSHSDEDFQPNQSSDDDEETIAKAEEELKSVTNHKEEVELL
KKESELPLEDLLKELPPDYLENRNKSLSPASKGVEEESEKTTDGDMDFVAASDESSDEEE
TIMEQEKLEENADYKQELDDLKAENEMSIDELMAKYGNMSDVPIDVEQEPIQESDKESIK
EEAQENDEESTSNESESEESDNEVDEEESQTQTDNEADIGLKSLLEDVSMEKSSNDKTAE
MDHSNARDEMDNVAALAESIQPKGNTLLTTSVVTKIPFLLKHPLREYQHIGLDWLVTMYD
RKLNGILADEMGLGKTIQTIALLAHLACEKGNWGPHLIIVPTSVMLNWEMECKKWCPGFK
ILTYYGTQKERKQKRTGWTKPNAFHICITSYKLVIQDHQSFRRKKWKYLILDEAQNIKNF
KSQRWQLLLNFQTQRRLLLTGTPLQNNLMELWSLMHFLMPNVFQSHREFKEWFSNPVTGM
IEGNSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVVMCRLSKRQRYLYDDFMS
RAKTKETLASGNLLSVINVLMQLRKVCNHPNLFEVRPTVSPFQMEAIEYVTASLVWSALD
YDPFKHIDLSSINLLLCDLELSLTAFVAHRVRRLQTPRKLIEEIDTQPDPSPRCPPGKIK
INVRLSNQVKPSSVPRQTQTKLKNLTGILPTPKVGTSPLIKTANNQSTPGQGVTLKVAGG
QQLQGYSVQLVQHQGSVKAIPVGTLAHNPQSTTVTPTTAATSAQRITVGNANIIDGLQRL
ATQTVAVKQGDSVQRIAMPNLAQVVQTSIGRHIILTSNQQNTNTVSFPVMTPCVPRLKVL
PKSLMGLSTSATTVNKVIGGVVTTTSGTSGRPVMRVPPLNVTASPNVTAQSPAGNGQSQQ
QSNRCGIITRHAQKESEKAQVKERPKSEFYLPQLEEERKQRRQAKLRLLANTNERRCAAC
PLYGEDLFMALRIGKPSTACRWHNGWVHCATAKDNARTRRQFFSRTEALAEAIKSTEQIV
EELKEVFERFVVHVPAVCAPTPRFHVSHPPPHKLFAQRRIQMELQRQLSPKLALFHPVAS
AMMTQFPDPRLIQYDCGKLQSLHQLLRKLKSENHRVLIFTQMTRMLDVLEAFLNFHGHIY
LRLDGTTKVDQRQVLMERFNGDKRIFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDA
QAQDRCHRIGQTRDVHIYRLVSEKTVEENILKKANQKRLLGDLAIEGGNFTTAYFKSSTI
QDLFNIDQSENDATTRMAEVLEQNRDREKFLQKDNQGQTLEDKVAMGALESALAAAEEDL
DVQAAKTAKAEAVADLAEFDENIPLDDADRDDMQVSKAELEVQNLVSQLTPIERYAMKFV
EESEGAFSAAQLAAAERELEEQKKEWELDRLRALREEEERRMRLADDDEKPLTFGREDAQ
NQVNSASNSKKLVNKKLPPNRRRNSRKNISKSAQESESETETTTESESESQEDVVEDSLD
EESSHTESQSQGDEDEEEEEAHDQNDSEKGGYPKRKNRSNKSFSQNHFDLNSPRTRSRGN
VKINLWTLDVSPILPGIKPKCRGRASNLRKQRELEMRMKAEESFILPLPPVSSPKKLNNT
NISNKPNEGDNIVNEKEVVRADLKDTDAEKSTILPADEKRSESIENCKAIVNHCTIATSS
PKSNCDETVIDESNATIALDSLEIETCSQSGNSSGTSEQSKDLEEGIIDNKDAGEAAQQL
TENTTSSIYITKSMSVAMAQSSNLEGAASCNDDSKYFNVDLISQNSSPRSVVMESNVVKR
ISDSKCLKSSMTLEIDEEINISEDSLIAPLKNKIVVQDADENVECTTKKLVSDTVSKSKI
TSSTIDESDTELKGELLISNAESEVLKNKALDELQDINISNDEYSVKNDARTQSPIETKE
DMDMKETSINNKQYDESTSNSDTTNKSVNDNESISVIESSSSQEPSSSKQEENYTKVDEC
VRDEDDTKVQSTSSTQNSDNTFSFDTLGSNESSGSESNTENKIKFRKPDTISYGVTTRSA
KVNISVENTENKNLILCSDTCESQGSETSNSNSNTHRKETSKVTQIRRPDTPRPTTEHSR
ITRSSAIRSLTPPPNSNSTKSLQKRRPDTPLPECFRSSPRLATRSMSNLSSSLRNEEQNT
ASYEKPTTRRSKTLDNGVLNPTVFRRSSSIPPMKPTSDSKDCTSSISTRCKRNSESTSTN
TSTSRRRPDTPVPTFEQGSRVTRSGLNFTLNSAKGPNHVSNKGNKHIRKVDSSSDSKSQE
EESSAVSPLSGKTETLNTDSNGNAVVSETFPKQDDSTLSSFNEINEKPQRTAKVVAILTL
DTRSNHTSKASSSVHAKTSNCNSSDTKNNKKNADSNSNSASDSSGKNCVLRISDVTPNCK
VDGWCDSGLDTGSRDRVSSNVFSNVASTYTSSNKAGKSPTLNKNTSLNSKLKTDKVPIQS
TVIALVDLDNDSNYDSSDGSKKLRRKIKRTRLSTFAKPLISGKTNESQIADALNDEEQIP
PMKKSIRTQLTPPPPSSQTTQLEKISSGTIS
NT seq
9456 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataagcagactgcacctattttaccacccctcaatgggggtggaggaaataat
gggggtagcaatggaggtgcaccgcaacagactgttaatttacaacaagttcttgctact
gcccaaggacttaatgtccttactacaggcgctggccagcaatttgttattacttcacag
gtccctggtcttacacaggttataccaagtaatccaacaacaaatacaaacattcaacaa
gttggtgttacaagaattgttaatatcagtggtacaccaccacgtgcaggtactgtggga
gttgcaggtgcaagtagttcacctcttacatctcctactcgtcagggttcacctaaagtt
gttttagcaacatctccaaaacttgttcgaacttctattggaaatatgtttgttgcacca
acgtcgcaagcttctatgcattcaccacctgcaagaaaaaagttgaaattaacagattct
accgaaaaacatactatgcttgctgatgatgcaatgggttacagaaggagaattatggaa
cataaaatgaaaaaaatgcgtgcaataagagagagatatgcagagaatgcatcagaatta
ttctttcttcatgctggaggcaatatgatggattttcaaacatggaggaagaaacctcca
acaccccaatatttgcattttttacggcaacatagattagatccagatgatgatgatgaa
gatttaacagctccactgccagcaatatcagaaattccattaacaccaactgcaacaact
gtttctacaatagttcctgtgaatcagtgtacagaagtaaaaatttctggaatgaatgtt
gctccagttgcggtgtccacaacattgcctgctgcagtagctcaacttaatcaacaagga
catgtaccaggtaggcctcaagggggccgccatggcatggtgcttgccttcagagcagca
attcagtcttcaccagtcaccgctcaccttccacctacttcttctactctagcacccacg
ctcattataggtaatgcaccaatagttccaggttcgccgaaacctgtcgcaacaactgtt
acaagtccagtgatagataaatctacaatagctacgtctattacaacaactattactaca
atgactactcctacccttacttttactggaactaccaccaccacagctactgttactact
gttacaaaaacatcttctgcgcctactatacctactcagcctgttgttaaacttgttaag
ttacctgcctctaatgcggctacgtcatgtgatatcacaaataaccaagaacaaattgta
gagaaggcaaaacaggaagcatacgttatgcaaaggattgcggaattacagcgggaagga
ttatggtcagaaagaaggttgcctaaagtacaagagccacctcgtacaaaggctcattgg
gactatttgttagaagagatggtttggttagctgctgactttgctcaagaacgaaagtgg
aaaaaagctgcagcaaaaaagtgtgcgcgtatggtacagaaatatttccaagagaaagca
attcaagcacaaaaagctgaaaaatcacaagaacttaggttaaagaaaattgctagtttt
attgctaaagaaatcaaaactttctggacaaatgtggaaaaattagtggaatataaacag
cagacgaggcttgaagagaaaagaaagcaggcactagatcaacacttaaattttattgtg
ggtcaaacagagaaatattcaacatggttaacggaaggacttaataaaactgatggtcct
caaagtgtgccagcttccatgaatagttcgcgtatttcttccccaataccacccggcaaa
tctcattctgatgaggattttcaaccaaaccaaagctcagatgatgatgaagaaaccata
gcaaaagccgaagaagaattgaaatctgtgacaaatcataaagaagaagttgaactgctg
aaaaaagaatcagagttacccctagaagatctccttaaagagctaccacccgattacttg
gaaaatagaaataaaagtttatcacctgcatcaaaaggagtagaggaggagagtgaaaag
acaacagatggcgatatggattttgttgccgcatcggatgaatcctccgatgaggaggag
actattatggaacaagaaaaactggaagaaaatgcggattataaacaagaattagacgat
cttaaagctgaaaatgaaatgtctattgatgaacttatggccaaatatggtaacatgtca
gatgtgccaatagatgttgaacaagaacctattcaagagtcagataaagaaagcataaaa
gaagaagctcaggaaaatgatgaagaatctacgagtaacgaaagtgaaagtgaagagagt
gacaacgaagttgatgaggaagagtctcaaacacaaactgataatgaagccgatattgga
cttaaatctctcttagaagatgtatccatggaaaaatcatcaaatgataagactgcagag
atggatcattcaaatgctcgcgatgaaatggataacgtcgcggcattggcagaaagtatc
caacctaaaggaaatactttacttaccaccagtgttgttacgaaaattccatttcttctg
aaacatccccttcgagaatatcaacatataggcttagactggcttgttacaatgtacgac
aggaaattaaatggtattttagcagatgaaatgggtttgggtaaaaccatacaaacgatt
gctttacttgcgcatttggcatgcgaaaaaggaaattggggtcctcatcttataatagta
ccaacatctgtgatgcttaactgggaaatggaatgtaagaaatggtgtccaggatttaag
attttgacttattacggaacgcaaaaagaaaggaaacaaaaaagaacaggttggactaaa
cctaacgcttttcatatttgcataacatcatataaactggttatacaggatcatcaaagc
tttagaaggaaaaagtggaaatatcttatattggatgaagctcaaaatataaaaaatttc
aaatcacagagatggcaattactattgaatttccaaacccaacgacgattattgcttact
ggtacacctctacagaataacttaatggaactgtggtcattgatgcattttttaatgccg
aatgtattccagtcacatagagaatttaaagaatggtttagtaatcctgttactggaatg
atagaaggaaatagcgaatacaatgaaaatattattcgtcgtctgcataaggttttgcgg
ccttttttattacgaagattaaaaacagaggtagaaaaacaattacccaaaaagtatgaa
cacgtcgttatgtgccgtttgtcaaaacgtcagcgatacctatacgatgattttatgtcc
agagcaaaaacaaaggagaccctcgctagtggcaatctgttaagtgtgattaatgtatta
atgcaattacggaaggtgtgcaaccacccaaatttatttgaagttagacctactgtatca
ccatttcaaatggaagctattgaatatgtcacagcttcgttagtatggagtgctcttgat
tatgatccatttaagcatatcgatctatctagtattaatcttttattatgtgatttggag
ttaagtcttactgcgtttgtggcgcatagagtcagacgattgcaaacaccacgcaagctt
atagaagaaatagacacacaaccagatccgtctccgagatgtccacctggaaagattaaa
attaatgttagattatctaatcaagttaaaccgtcatccgtaccgcggcagacgcaaaca
aaattaaagaatttgactggaatattgcctactccaaaagttggaacatctcctttaata
aaaacagcaaataatcaaagcactccagggcaaggtgtcacattaaaagtagcaggtggc
caacagttgcaaggatattccgtacaattagttcaacatcagggtagtgtaaaagcaatt
cctgttggaacactagcacataacccacaaagtacaacagtgacaccaactacagcagcg
acgagtgcacagaggattacagtagggaatgcaaatattatagatggactgcaacggcta
gcaacacaaacagttgcagttaaacaaggtgattccgtccaaagaatagcaatgcctaat
cttgcacaagtggttcaaacatctattggtagacatatcattttgacttcaaatcaacaa
aatactaacacagtttcatttccagtaatgactccatgtgtaccacgtttgaaagtttta
ccaaaatctttaatgggcctatctacctcggcaactacagtaaacaaagttataggagga
gtggtgacaactacaagcggaacaagtggaagacccgttatgagggtgccgcctcttaat
gttactgcctctcctaatgtcactgcccagtctcctgctggcaatggacaatctcaacaa
caatcgaaccgttgtggtattattactagacacgcacaaaaagaatcagaaaaggcacaa
gtcaaagaacgtccaaaatccgaattttatttgccacaattagaagaagaacggaaacaa
agaagacaagctaaacttcgtctacttgcaaatactaatgaaagacgatgtgccgcatgc
cctctctatggagaagatttgtttatggcattaagaattggtaaaccatctacggcatgt
cggtggcataatggttgggttcactgtgcaactgctaaagataatgcacgtacacgaagg
cagtttttttctcgcacagaagcacttgcagaggcgatcaaaagtacagaacaaattgtt
gaggagctgaaggaagtttttgagaggtttgttgtacatgttcctgctgtgtgcgcccct
acgccacgttttcacgtttctcatcctcctccacataaattgttcgctcaacgacgtata
caaatggaattacaacgtcaactatcgccaaaattggcattgttccatccagtagctagt
gcaatgatgacgcagttcccagatcccagattgatacaatatgactgtggaaaattgcaa
tctttacatcaacttcttagaaagcttaaatctgagaaccatagagttttaatttttaca
caaatgaccagaatgttagatgtattagaagcttttcttaattttcatggacacatatat
ttacgtttggatggtactactaaagtagatcagcggcaggttttgatggaaagatttaat
ggagacaaacgaatattttgtttcattttatcgacgagatctggaggtgtaggtgtgaat
cttacaggagcagacactgttatattttatgatagtgattggaatcctacgatggatgcc
caagcacaagacaggtgtcatagaataggtcaaacacgtgatgtacatatctacaggtta
gtaagtgaaaaaaccgtagaagaaaatattctgaaaaaagccaatcagaagagactactt
ggagatttagctatcgagggtggtaatttcacaactgcttatttcaaaagttctacgatt
caagatctgtttaacatcgatcaatcggagaatgatgcaacgactcgaatggccgaagta
ttggaacaaaatagagatcgagagaaattcttgcaaaaggataaccaaggtcaaacttta
gaggataaagtagcaatgggtgcgcttgaaagcgctcttgccgctgctgaagaggatctt
gatgtccaagccgcaaagaccgctaaagcagaggctgttgctgatttagcagaatttgac
gaaaatatacccttggatgacgcggacagagatgacatgcaagttagcaaggccgagctt
gaagtacaaaatttagtatctcagttaacacctatagaacgttacgcaatgaagtttgtc
gaggaatcagagggtgcattttctgcggcacaacttgcagcagccgaacgtgaactcgaa
gaacagaagaaagaatgggagttggatcggttacgagcgttgcgcgaggaggaagaaagg
agaatgcgattagcagatgacgatgagaagcctttgacgtttggacgcgaggatgcgcaa
aatcaggttaatagtgctagtaattctaagaaattagtcaataagaaactcccaccgaat
aggaggaggaattcgcgtaagaatattagtaaaagtgctcaagaatcggaaagtgaaact
gagactactacagaatcagaatcagagtcacaagaagatgtggtagaagatagccttgac
gaagagtcgagtcatacggaaagtcaaagtcaaggcgacgaggatgaggaggaggaagag
gcacacgatcaaaatgattctgaaaagggcggctatcccaaacgtaagaaccgttctaat
aaatcttttagtcaaaatcatttcgatctgaacagtccacggacgagatcaaggggaaat
gttaaaattaatttgtggacattggacgtaagtcctatcttgcctggtataaaaccgaaa
tgccgaggtagagccagcaatttgcgtaaacaacgtgagctcgaaatgaggatgaaagca
gaagaaagtttcattttacctttgccaccagtctcaagccctaaaaagttaaataatacc
aacatttcgaataaacccaatgaaggagataatattgtgaatgagaaagaggtggtaaga
gctgatttaaaagatacagatgctgaaaaaagtacaattctgcctgctgatgaaaagcga
tctgagagcatcgaaaattgtaaagcgattgtaaatcattgcaccattgcaacttcttcg
ccaaaatcgaactgcgatgaaactgtcatagacgaatctaatgccaccatagctttagat
tcgttagaaatagaaacatgttctcaatcaggtaattcatcaggcacgtcagaacagagt
aaagatttagaagaaggtataattgataacaaagacgctggtgaagcagcacaacagtta
acagagaataccacatcttcaatatatattacaaagtcaatgtccgtagcaatggcgcaa
tctagtaatttagaaggtgctgcaagttgtaatgacgattctaaatacttcaacgttgat
ttgatctcacagaatagtagtcctcgttcagttgtaatggaatcgaatgtggtaaaaaga
atttctgattcgaaatgcttgaaaagttcaatgactttggagatagatgaagaaattaat
atatcggaagattcattgattgctcccttaaagaataaaatagtcgttcaagatgcagat
gagaatgttgaatgtacaacaaagaaattagtaagtgatactgtttctaagagtaagata
acttcatctaccattgatgagtcagatacggaattaaaaggagaactacttatctctaac
gcggaatcggaggtattaaaaaataaagctctagacgaactccaagatataaatatttct
aatgacgagtatagtgtaaaaaatgacgcaagaacgcagagtcctatcgaaacgaaagaa
gacatggatatgaaagaaacttcaataaataataaacaatacgatgaaagtacttcaaat
tcagatacaacaaataagtctgtcaatgataatgaatccatttctgtgatagaatcaagc
tctagtcaagaacctagtagcagcaaacaagaagaaaactatactaaagtagatgaatgt
gtgcgcgacgaagatgatacaaaagttcagtcgacctcatcgacacaaaacagtgacaat
accttttcctttgatactttaggctcgaatgaatcaagtggatctgaatctaatacagaa
aataagattaaatttcgtaaaccagatacaatatcttacggagtgactacaagaagcgcg
aaagtaaacattagcgtagaaaatactgaaaataaaaatttgatattatgtagtgataca
tgtgaaagtcaaggtagcgaaacttcaaattcaaattcgaatactcatcgaaaagaaact
agcaaagtaacacagattcgaaggcccgacacacctcgaccgacgacagaacattctagg
attacaaggtcaagtgcaattcgttctttaacacctccaccgaattcaaattccacaaaa
tcattacaaaaaagacgaccagatactcctttgcctgaatgctttagatcttccccacga
ttagcgacgaggtctatgtcaaatttgagttcatcactaagaaacgaagaacaaaataca
gcgtcatatgaaaaacccacgacacgtaggtcaaagactttggataatggtgttttgaat
ccaactgtgtttcgaagaagcagttcaataccacctatgaaaccaacatctgattcaaaa
gattgcactagttctatttcaactagatgtaaaagaaatagtgaatctacaagtacgaat
acaagtacatcgagacgacgaccggatacacctgttcctacttttgaacaaggatcgagg
gttactcgatccggattgaattttacgctaaattcggcaaagggtcctaatcatgtgtca
aacaaagggaataagcacattcggaaggtagattcgtcttccgattcaaaatcacaggaa
gaggagtcttctgccgtttcaccattgtctggaaaaacagaaacgttgaacacagattca
aatggtaacgcggttgtatcagaaacctttcccaaacaagatgattcaaccctatcctcc
tttaatgaaattaacgagaaaccacaaagaactgctaaagtcgttgctattcttactttg
gatacacgaagtaatcataccagtaaagcttctagttccgttcatgcaaaaacatctaat
tgcaattcttctgatacgaaaaataataaaaaaaacgccgattctaattccaattccgca
tctgattcgtcagggaaaaattgcgttcttaggatttcagatgttactccgaattgtaag
gtagatgggtggtgtgattctggattggataccggttctcgagatcgcgtttcctctaat
gtattttccaatgtagcaagtacttataccagttccaataaggcaggaaaatcaccgacg
ttgaacaaaaatacgtcattgaattctaaacttaaaactgataaggttccgatacaatca
acggtgatagcattggtcgatttggataacgactctaattacgattcatcagatggatca
aagaaattaagaaggaaaattaaacgaacacgactgtcaacgtttgcaaagccactgata
agtggaaaaacgaatgaatcacaaatagctgacgcgctaaatgacgaagagcagataccg
ccaatgaaaaagtcgattcgtactcagcttactcctcctcctccctcttcgcaaacaact
caattggagaaaatcagtagcggtactatatcttga
DBGET
integrated database retrieval system
