KEGG   Bombus affinis (rusty patched bumble bee): 126916036
Entry
126916036         CDS       T09368                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
baff  Bombus affinis (rusty patched bumble bee)
Pathway
baff03020  RNA polymerase
baff03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:baff00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    126916036
  09124 Replication and repair
   03420 Nucleotide excision repair
    126916036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:baff03021]
    126916036
   03400 DNA repair and recombination proteins [BR:baff03400]
    126916036
Transcription machinery [BR:baff03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     126916036
DNA repair and recombination proteins [BR:baff03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      126916036
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 126916036
NCBI-ProteinID: XP_050577348
LinkDB
Position
5:13301701..13302594
AA seq 117 aa
MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPQVLFAG
YKVPHPLEHKFVIRIQTTSDYTPHDAFMHAITDLIAELSLFEERFKEAIKEKKEGLD
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaatgcgcctccgaccttcgaatcgttccttttatacgaaggagaaaaaaaaataatc
aaagaacaagacactaaagttcccaatgccgcgattttcactgtgaataaggaggatcat
acccttggaaacatgatccgcaatcagctactgaaagatcctcaagtcttgtttgctgga
tacaaagttccacatccattagaacacaaatttgtaattagaatccaaactacatcggac
tatacgccacatgatgcttttatgcatgctattacagatctcatagcagaactctcacta
tttgaagaacgttttaaggaagctattaaggaaaaaaaggaaggactagattaa

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