Bombus affinis (rusty patched bumble bee): 126916111
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Entry
126916111 CDS
T09368
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126916111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
baff02000
]
126916111
Transporters [BR:
baff02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
126916111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
SMC_N
RsgA_GTPase
AAA_30
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
126916111
NCBI-ProteinID:
XP_050577471
LinkDB
All DBs
Position
5:9114813..9150204
Genome browser
AA seq
1718 aa
AA seq
DB search
MDMCGVYLSQLRAMLVRNILLKKREKRKTTAEIFLPLCTLGVLIVVKVLPPNPNYPAMTT
QRQEGGIFETFNGYRNNTIAVVPNSTETLTFLNSMNALWASMWDYPGKLPLNFMVFDTKD
DLQAAYWRDPYSVPLAVIFEDSQPISQRLSYEIRTNPSYTNPPSPTELYSAPVTCRKDTS
HWLGGVLSMETGGSCPANNYLHSGFLALQMIMDITKIRLDTGNTDVTVPDVKLEMFPKEA
FTANWMLALRVVIPLFMVLSLSQFVTYLLILIVGEKEKKIKEGMKIMGLKDSIFWLSWFI
IYSVFVLLLSAVAVILLFTLQMFQHTHFLPIFLLVVLYSFSIIMFAFMITPFFDTSRTAG
VLGNFAVTIMSLMYFIQVFVNDSSSVPFWLVSLLSPTGVALAMDKALVLDLQGEGVNFDN
LWSGPGIPFGGSLIMMTLDIILYACLAYYFDCVIPSEYGTKRTPWFCFTPEFWCQRKAPR
SYLQVPSSNGESNSFIPGEETNRDVEPVVREMKGREAIRIVDLYKSYQKCRKPEIKAVNG
INLTIYEGQITAILGHNGAGKTSLFNILTGLTAPTAGTALIFGYDVRDSNDMQMIRSMTG
VCPQHDILFDLLTPREHLEFFAAVRGIPKSMIEHEVKKTLKDIDLTEKANTFAKYLSGGQ
KRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSFLQSRRHGKVILLTTHFMDEADIL
ADRKAVISKGKLRCCGSSLFLKNKFGIGYHLTLVLEGNAREHAITRLVTCHVSKAEKARR
HGRELSFILPHNSVENFAPLFSAIEHEIKTRSSRLGISSYGVSMTTLEEVFLHLEKDEGP
EYTMDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQNDGQAKEAGDLPDGVHSDR
NPPVLGLGLDPIKVRPNFLQTLYAMLRLRILRLFRNIQLLYFTIFAPLLLVVVGLHLNSI
ETVEIKMQSLTLNTDTYGNETKLLYANNTDHDITNLIDGINQDVKYIEEYYGNFANLLKI
APHMSAFNINEYSLSRINLTVAYNDTMQHSLPILINLLSNTYYRLLSNENNLKPIEVKTH
PFQQTSQPQGFNIGTASTALFIGMNFVLLPITLVVDVVYDREIKAKNQLRVNGLSFSMYF
LTYFIVLVGLMSFICLCILGIIFLFDVPSLQEVPALITLAGLFMLYCPSSILFSTCLSYI
FDKMDSAQSILPNIATFIGLIPFILVTILDMLGLSGTAAFVLHVIFSLLNTLYVPYAAVY
YVERVHLMCSINAACHHLTMSDYLTTEIILMAFGVLLHCPVWFFVLLLLDIKKSGGNVSD
VLKYFLRNGGSIGEEIMENSDIGEHEDADVKAEKQKVFNLITSSAVQEPPVVLVQNLRKE
YRQQDTGSCSCCSKQDEEASQIQRKVAVRNLSLAVEPGEVFGLLGHNGAGKTTTMKIIIA
EEAATRGRVQIGGHNINSSMTEAFKQMGYCPQHDAQWKNITVREHLESYAAIRGVPWSDI
GRIVDLYLTGLQIHEHADKQAHECSGGTRRKLSFAMAMIGGPKVVLMDEPSAGMDPRSKR
FLWDTILASFQGGRGAILTTHSMEEADALCSRVGIMVKGELRCIGSTQHLKNLYGAGYTL
EMKLLGGDCTPTTPSGDRITILKEFVSSLFPDATLEESFADRLVFAVPQHAVTSLAECFT
QLEKAKLELDIEEYSFSQTTLEQVFLKFSHYDESNSGE
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtgcggggtctacttgtctcagctgcgagcgatgctcgtgaggaatatcctg
ttgaagaagcgcgaaaagcggaagactacagcggagattttcctccccctttgcacctta
ggtgtattgatagtggtaaaagttttgccaccgaatccaaactatcccgcaatgacgacg
cagaggcaggagggtggtatattcgagacgttcaatggctacaggaacaacacaatagcc
gttgttccaaactcaacagaaactttgacttttttaaattcaatgaatgccctgtgggca
tcaatgtgggattaccctggcaaacttcccttaaatttcatggtgttcgatacaaaggat
gatctgcaagcagcgtattggagagacccatatagcgtacctttagcagtaatcttcgag
gattctcaacccatatctcagcgtctctcgtacgagataagaactaacccctcatatacg
aatccaccttcgccaactgaattgtattccgccccagttacttgccgaaaggatacgagc
cattggctgggaggtgtattgtcgatggagactggtggatcatgtcctgcgaataactat
ttgcactcaggtttcctagcattacaaatgataatggatatcacaaagataagactagac
acagggaatacagatgtaactgtaccggatgttaagctagaaatgttccctaaagaagct
ttcaccgcaaactggatgctggccttgagagttgttatacctctttttatggtcctctct
ctttcacaattcgtcacttatcttctgatcctaatagtcggcgaaaaggagaaaaagatc
aaggaaggaatgaagataatgggcctaaaggattcgattttctggttatcatggttcatt
atctacagcgtttttgtcttattactctctgccgtcgcagtaatactacttttcacatta
caaatgtttcaacacacacactttttaccgatattccttttagtagtgctctacagtttc
tccataatcatgttcgcttttatgataacacctttcttcgacacgtcacgaactgccggt
gtactaggcaattttgcagtcacgataatgagtttgatgtattttatccaagtctttgtg
aatgactccagttcagttccgttttggttagtctctcttcttagtccaacaggcgttgct
ttggctatggataaggctcttgtattagatctacaaggagaaggagttaactttgacaat
ctttggtcaggtcctggtataccatttgggggaagtcttattatgatgactttagacata
attctctatgcttgcttagcttattattttgactgcgtcattccaagtgaatacgggacg
aagagaactccttggttttgcttcacgcctgagttttggtgtcaaagaaaagctccacgg
tcgtatttgcaggtaccatcatcgaatggtgaatcaaattcttttattcctggtgaagag
actaatcgtgacgttgaacctgtggtgcgcgagatgaagggtcgtgaagcgattagaata
gtcgatctttacaagtcctaccaaaaatgtcgtaagccagaaattaaagccgtaaatggc
atcaatttaacgatttacgagggacaaatcacggcgatacttggacacaacggagctgga
aaaacaagtctcttcaatattttaactggcctgaccgcacctactgctggcactgccttg
atatttggttatgatgttcgagattccaatgatatgcagatgattagaagcatgactggc
gtctgtccacaacatgatatcctttttgatcttctcacacctcgcgaacaccttgaattt
ttcgctgctgtacgtggtatcccaaaatcgatgattgaacatgaggtgaagaaaacttta
aaagacatcgatttaactgagaaagcaaatacttttgcgaaatacttgagtggaggacaa
aaaaggaaattgtctgtaggtatcgccattatcggtgatccgaagattattatcctcgat
gaacctacagctggggttgatccctactctaggagacagatgtggtctttcttacaatct
agacgtcatggaaaagtgattctattgactactcattttatggatgaggcggatatatta
gcagataggaaagcagttattagtaaaggaaagctgagatgctgtggcagttctttgttc
ttaaaaaataaatttggtattggatatcacttaacgttagtacttgaaggaaatgcaaga
gaacacgccattaccagattagtaacgtgtcatgtctcaaaagcagaaaaagcaagacgt
catgggcgtgaactgagctttattttacctcataattcagtagaaaacttcgcaccactt
ttctcagctatagagcacgaaattaaaacccgatcgagtagattaggtattagcagctat
ggagtatcaatgaccactttagaagaagtatttctgcatttagaaaaggatgaaggtcct
gaatacacaatggataatttatcaaaaaagatggtgcgcaatcgtgcattaagcagatct
ttatcgttgcaatctaagagtacttcttatcagagtttgcagaacgaaggtgtcactgtt
cagaatgatggtcaagcgaaagaggcaggagatttgccggatggcgtccatagtgataga
aatcctcctgttcttggccttggactagaccccataaaagttcggcctaatttcctccaa
accttgtacgctatgcttcgcctaaggatacttagactcttcaggaacattcagttattg
tacttcactatcttcgcgcctcttcttctagtagtcgttggcctccatttaaatagcatt
gaaacagttgaaatcaaaatgcaatctcttacattgaatactgatacttatggaaatgag
actaaacttttgtacgcgaataataccgatcatgatatcacaaatttaatcgatggaata
aatcaagatgtgaagtacattgaagagtattacgggaattttgcaaatttgttaaaaatc
gcaccgcatatgtctgctttcaatatcaatgaatatagtctgtccaggatcaatttgact
gtcgcatataatgataccatgcaacattccctaccaattttaataaacttgttatcaaac
acttattacagattactctcaaatgaaaacaatttaaaaccgattgaagttaagacacat
cctttccaacaaacttctcagccacagggattcaatattggcacagcgagtaccgcactg
tttattggaatgaattttgtattgttgccaataactttagttgtggacgtggtctatgat
cgtgaaataaaagcgaagaatcagcttcgtgtgaatggtctgtcattttcgatgtacttt
ctgacgtactttattgtacttgtcggcctgatgtctttcatctgtttatgtattcttggc
atcatatttctctttgacgtgccttcgcttcaagaagtaccagcactcatcactctagcc
ggtcttttcatgctttattgcccatcatccattctattctctacgtgtttgagttacatc
tttgacaagatggattccgctcaaagcattttgcccaatattgcaactttcattggactt
ataccgtttatactagtcacaattcttgacatgctgggtcttagtggaacagcagcgttt
gttttacacgtaattttttctctactgaacacattgtacgtaccatatgctgcagtgtat
tacgtagaaagagtacatctaatgtgctctatcaacgctgcttgccatcatctgactatg
tctgattatttaaccacggagatcattctaatggcctttggcgtgcttctgcattgtccg
gtgtggttcttcgtgcttttactattggacattaaaaagagtggtggcaatgttagtgat
gtattgaagtatttcctgcgcaatggcggttcgattggtgaagaaataatggagaactct
gacattggagaacatgaagatgcagacgttaaagcagaaaaacaaaaagtttttaatctc
attacttcatctgccgttcaagagccacctgtagttctagtacagaacttgagaaaggag
tatcgacagcaggatacaggttcatgtagttgctgttcgaaacaagatgaagaagctagc
caaatacaacgaaaagttgctgtaagaaatctttcgttagcggttgagccaggagaagtg
tttggtttgctgggccacaatggtgctggaaaaacgacgacaatgaagattatcatagct
gaagaagcggccactcgaggcagagtacagatcggtggtcataatattaattcaagtatg
acagaagctttcaaacaaatggggtactgtcctcaacatgatgctcaatggaagaatatt
accgttagggaacatttagaatcttacgccgcgattcgtggtgtaccatggagtgatatt
ggcagaatcgtagatttatacctcaccggtttgcaaattcatgaacacgccgataaacaa
gctcatgagtgttcgggtggaactagaagaaaacttagttttgccatggcaatgatcgga
ggtccgaaagttgttctaatggacgaacctagtgcaggaatggatcctaggtcaaagaga
tttttatgggatacaatccttgctagtttccagggtggtagaggagcaattcttaccact
cattcaatggaggaagctgatgctctttgttctagagtgggtataatggtaaaaggagag
ttaagatgtattggttctactcaacatctgaagaatttatatggtgcaggctataccctc
gaaatgaaacttttaggcggtgattgtacaccaacgacaccgtccggtgataggattacg
attctgaaagaatttgtttccagtctttttccagatgcaactctcgaagaaagttttgcc
gacagattagtttttgctgttccccaacatgcagttacctcgctggccgagtgttttacg
cagttggagaaagccaagctcgagctggatatcgaagagtatagcttcagtcaaaccact
ttggaacaagttttccttaaattttcccactatgatgaatctaactcaggagaatga
DBGET
integrated database retrieval system
