Bombus affinis (rusty patched bumble bee): 126916227
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Entry
126916227 CDS
T09368
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126916227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126916227
Spliceosome [BR:
baff03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126916227
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
126916227
NCBI-ProteinID:
XP_050577734
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Position
5:complement(942899..945447)
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AA seq
489 aa
AA seq
DB search
MSLADELLADLEENDDNDDIAEEPEPDFIPASVSKTIEEEIKVASVRELAKLRDSEQLQK
VMLQIEKYSKIPRKSADIIGPVESDPEYQLIVEANNMAVDIDDEIATIHRFARDKYSKRF
PELESLVVGPLEYVMTVRELGNDLDRAKNNETLQQFLTQATIMVVSVTASTTQGQLLTEE
EKEAICEACDMAVELNNCKLKIFEYVESRMAFIAPNLSVIVGASTAAKIMGVAGGLTKLS
KMPACNLLVLGSQKTTLSGFSQVTTLPHTGFIYYSDIVQETPPDLRRKAARLVSAKSMLA
ARVDACHESTDGHIGQMFREEIEKKLDKLQEPPPVKFVKPLPKPIDPGRKKRGGKRVRKM
KERYAITEFRKHANRMNFADIENDAYQEDLGYSRGTIGKAGTGRIRLPQIDEKTKVRISK
TLQKNLQKQQQWGGSTTVKKQVSGTASSVAFTPLQGLEIVNPQAAEKKVNEANAKYFSNI
AGFLKVKKT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagccgatgagttattagcagatcttgaagagaatgatgataacgatgatatc
gcagaagaaccggagccggattttattccggcttccgtttcgaaaacaatcgaagaagaa
ataaaagtagcttctgtaagagaattggcaaaacttcgtgattcagaacagttacaaaaa
gtaatgttacaaatagaaaaatatagtaaaattcctagaaagtcggcagatattattggg
cctgttgagtctgatccagaatatcaacttatcgttgaggctaataacatggctgtagat
attgatgatgaaatagctaccatacatcggtttgccagagacaaatattccaaaagattt
ccagaactagaatctttagttgttggtccattagaatatgtgatgacagttagagaatta
ggaaatgatttagatagagcaaaaaacaatgaaacattgcaacaatttcttactcaagca
acaattatggtggtttcagttactgcttcaacaactcaaggacaattattaacagaagaa
gaaaaggaagctatttgcgaggcatgcgatatggcagtagaattgaataactgcaagtta
aaaatatttgaatatgttgaaagtaggatggcatttatcgcgccaaatctttctgtaata
gtgggtgcatctacagcagcaaaaattatgggtgttgctggtggactgacaaaactttcc
aaaatgccagcatgcaatcttttagttttgggatctcaaaaaaccacattatctggattt
tctcaagtaacaactttacctcacactggatttatatattattctgatattgtacaagaa
acaccaccagatttacgaagaaaagcagctaggcttgtgtcagcaaagagtatgttagct
gcccgagttgatgcgtgtcatgaaagtacagatggtcatattggtcaaatgttccgtgaa
gaaattgagaaaaagctcgataagcttcaagaaccacctcctgttaaatttgtgaaacct
ttaccaaaacccattgatccaggacgaaagaaacgtggtggtaaacgtgttagaaaaatg
aaggaacgttatgctatcactgaatttaggaaacacgcaaatagaatgaatttcgcagat
atcgagaatgatgcttatcaagaagatcttggttattcgcgtggaacaattggcaaagca
gggactggtcgtattcgactaccacaaatcgatgaaaaaacaaaagtacgaatatcaaaa
acgctccagaaaaatttacaaaaacaacaacaatggggtggtagtacaacagttaaaaaa
caagtttccggaacagcatctagtgttgcatttactccattacagggtttggaaattgta
aatccgcaagccgcagaaaagaaagtaaacgaagccaatgctaaatatttttcaaatata
gctggatttttaaaagtgaaaaagacataa
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