KEGG   Bombus affinis (rusty patched bumble bee): 126916232
Entry
126916232         CDS       T09368                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
baff  Bombus affinis (rusty patched bumble bee)
Pathway
baff03030  DNA replication
baff03410  Base excision repair
baff03420  Nucleotide excision repair
baff03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:baff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126916232
   03410 Base excision repair
    126916232
   03420 Nucleotide excision repair
    126916232
   03430 Mismatch repair
    126916232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:baff03032]
    126916232
   03036 Chromosome and associated proteins [BR:baff03036]
    126916232
   03400 DNA repair and recombination proteins [BR:baff03400]
    126916232
DNA replication proteins [BR:baff03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126916232
  DNA Replication Termination Factors
   ELG1-RFC complex
    126916232
Chromosome and associated proteins [BR:baff03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126916232
DNA repair and recombination proteins [BR:baff03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126916232
  Check point factors
   HRAD17(Rad24)-RFC complex
    126916232
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 Rad17 AAA_16 AAA_24 Mg_chelatase Viral_helicase1 AAA_11 RuvB_N AAA_assoc_2 AAA_19 nSTAND3 AAA_18 AAA_28 AAA_5 DEAD NTPase_1 ABC_tran DNAX_ATPase_lid MeaB MCM AAA_23 AAA_2 RNA_helicase cpSF2-GREB1 AAA_25 AAA_3 AAA_30
Other DBs
NCBI-GeneID: 126916232
NCBI-ProteinID: XP_050577743
LinkDB
Position
5:complement(1060571..1062327)
AA seq 351 aa
MGVENTVDEPMNVEAVPSTSGYNIKNKEKDKKSSNLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPVFKEAVLELNASNERGIDVVRNKI
KMFAQKRVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCQKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSENVFKVCDEPHPLLVKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLVSNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQKSMQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggagttgagaatactgtcgatgaacctatgaatgttgaagctgtgccatcgacgagc
ggttataatataaaaaataaagaaaaagataagaaatcaagcaatttgccatggattgaa
aagtatcgaccacaaatattttctgacattgttggtaatgaagacacagtatccagatta
tcggtatttgctgaacatgggaactgtcctaatattatcattgctggtccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagtgtttaaggaa
gcagtattagaattaaatgcgtcaaatgagagaggaatagatgttgtcagaaataaaatt
aaaatgtttgcccaaaagagggtaaatttggcaaaaggtaagcacaaaataataattttg
gatgaagctgatagcatgactgatggtgcacaacaagcattacgtaggacaatggaaata
tatagcaatacaactaggtttgcactagcttgtaatacaagtgaaaaaattatcgagccg
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcgcaaattttagca
aagattattgaagtttgtcagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgagaatgtttttaaagtctgtgacgaaccacatcca
ttacttgttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggagcatttatggaaaatgggatattctgcagaagatttggtcagtaatatattc
agagtttgtacaaatctatccatcgaagaaccattaaaattagattttataaaagagatt
ggaataactcatttaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaaaaagtatgcagaaataa

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