Bombus affinis (rusty patched bumble bee): 126916389
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Entry
126916389 CDS
T09368
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126916389
Membrane trafficking [BR:
baff04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126916389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
126916389
NCBI-ProteinID:
XP_050578116
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All DBs
Position
5:11190877..11198592
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AA seq
1557 aa
AA seq
DB search
MSSANSVESLGTLQWDIIELANHLRQERLFVTSEQQNLQILNEKVLYASSNLAQQAWITA
QQRVNLNQLIMSKPYCTPASCCQRANTLENSNFVDVYKYLRYQTCLSYGEFLGALRKSPK
LIASCLVEGDKLLPDSVQTIVQSLAAGLYGSCLLPEDKILVLKLLKHLMLLQIVPSDNPR
RLLRHSTCAFSRFYSVFHESLFSAKFFLTAALHNPIVQLLMEDEMFLDIDPDKAPIRFPP
SERLKKFGKEGTAEYETKLQRYRLWTINSLFHITQRFIISIRENMHCFPSSVCWLVRQMA
GLLGKSGNVDSKEVHAMCTDLVFTYFICPAIVNPEPYGITDAPISYIARFNLMQVGQILQ
MLSLMKYQAVDSKTFDLYKKFDKDSVSSIIDAMVDGAEELEDEPNIIDNNKLRGLSRSAA
LLTETELNTLITFLQTIAKETTVENASRSAAFEKKQLIDMLSQLPSGSLTTNKLANNASV
ETTNKKGGLLGKGKGRGIRVSSSSSYSSNTTNDGVDELNGTSTPEEESVDKNPQDVLVIP
FGPNTGEFVGLLSEQKVLCTELQSNIDNGSVNLNLSDDISNVHDRQNNCGVERTESQEKK
TRFSLSHDEVLFEGFIGNTSDNLEAVSEAASNHSVASSLELETEDQNDNLSDMVSASVSG
RGTPNISGRDTPSSQITEGDEGRTVGETRQLDLPPSNIPTKQSRCEIDDKFCKFEIKKLI
EGDETVSMVSDTWSTDVLASDSEIIEQQEKVLYPHSSEQAPPVLPTTSEPVPQAVLDVSE
TASEAWSTDVLASDSERLTEVDTDDTASVARSDDTARSEIEVEPRSEAEITEKTMIQAIP
RKNKNVTTTECVSTTNLRSISINQENMQFPTTVVLSPTNSLSASSLNVTGQNASRSDYQS
SVTEYVDKNPNSIDGSSTNYDKSLCEDRLVHLIDKLHIENGKSQMEQTSSAHNRISVAAV
APALLLANHISPPTLSSTEKSHNTNIKLESQELESSLVSSVDETVNENGPDGVVGLSTGS
LASSSSSGSDTRRKTTSSELPLSMGAMNESCNDCPKPTVSSGAIPKSISFDMTAERGDKE
LLDDDQKNKRSFFGKLKMSLRNRRGKAIRGTDDIGRCYDREAIGDNIDIGRHRLRRIMSE
DVSSAGNPSGDSTDDILAKYRRKPSAASDTEVSVESNQSRTKELTEDERLLIDPNNIELS
YAFADAKRKLRMVLSTADLQHIPWSAASERNYWSQKENELVAFLQLQLAEAINLQDRALI
AHLHETLRCVRLFNDDGCRKLFKSLREDYQKRSPYIAYLIRCRQGLLSTLAHLDRLCIRV
KCDRDAVNNHLVSACVKVFLEKKESLLLRFCDEFKKLTLADEKQDLVDSFLSKLNAKIDN
DSIWQCACENQLNLARVVVERTVMARVYHNALYPNGDGDVYRDQLLHDHIKKLANVVTPN
HKDLRIPKIYHYECPWPWAQAELAVISAYKTPRDKLQCVFRCATTIMNLLSMATERGVPA
ADDLIPVLVYVIIKTNPPSLLSTVQYVDSFYGNRLGGEEQYWWTQFCSAIEFIKTMD
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggcaaatagtgtagaatccctgggaacactacaatgggatataatcgaatta
gccaatcatttgcgtcaagaacgcctgtttgttacttcggaacaacaaaatttacaaata
ctcaatgaaaaggtgttatatgcatcatccaatttagcacaacaagcatggattacagcg
cagcaaagagttaatcttaatcagttgataatgtctaaaccatactgtacaccagcatct
tgttgtcaaagagcaaatacattggaaaattcaaattttgtcgatgtgtacaagtattta
cgttatcagacatgtttgtcatatggggaattcttaggtgctcttcgaaagtctccaaag
ctaattgcatcatgtttagttgagggggacaaattattaccagactctgtgcaaactata
gttcaatcattagcagctggtttatatggtagttgtttattaccagaggataaaattttg
gttttaaagttattgaaacatctaatgctgctacaaattgtaccatctgataatcctcgg
agattactcagacacagcacatgtgctttctctaggttttattcagtttttcatgagagt
ctattttcagcaaagtttttcttaactgctgctttacataaccctattgtacagttatta
atggaagatgaaatgtttcttgatattgacccagataaagcacccataagatttcctcca
tctgaaagattaaagaaatttggcaaggaaggtactgcagagtatgaaacaaagctacaa
cgttataggctctggacaattaattctctattccacattacacaaagatttataatcagt
atacgagaaaatatgcattgttttccaagtagtgtatgttggttggttagacagatggca
ggacttttgggaaaaagtgggaatgttgattcaaaagaggtacatgcaatgtgcactgat
ttggtttttacatattttatatgtcctgcaatagtaaatccagagccatatggtatcact
gatgcacctattagctacattgcccgattcaatctcatgcaagttggacaaattttgcaa
atgctttccttaatgaaataccaggctgttgacagcaaaacatttgatctatacaagaag
ttcgataaggattccgtttcttctataatagatgcgatggtggacggtgcagaagaactc
gaggatgagcctaatatcatcgataataataaacttcgaggtctttctcgctccgctgct
ttacttacagaaacggaattgaatacattaattacgtttctgcaaactatagctaaagaa
actacggtagaaaatgcttcacggtccgctgcgtttgaaaagaaacaattgattgatatg
ctctctcagttaccttccggttctttaactactaataaattggctaacaatgcttctgtt
gaaactaccaacaagaagggaggtttattaggaaaaggaaagggtcgaggaattcgagta
tcatcatcgtcatcatactcgtctaatacgactaatgacggggtagatgaattgaatggc
acttcaacccctgaagaagaatctgttgacaaaaatcctcaagatgttcttgtaattcca
tttggaccaaatacaggagaattcgtaggacttcttagtgaacaaaaggtgttatgcaca
gaacttcaatccaatatagataatggttcggttaatctaaatctttctgatgacatatcc
aatgtgcatgacagacaaaacaattgtggtgttgaacgtacagaaagtcaagaaaaaaag
acaagattttcgctatctcatgatgaagttttattcgaaggttttataggaaatacttcg
gataatttagaagctgtatcagaagctgcatcaaaccatagtgtcgcttcctcgcttgag
ttggaaacggaagatcaaaatgataatctctcagatatggtatctgccagtgtatcagga
cgaggaacgcctaatatatcaggtcgtgacaccccgtcatctcaaattaccgaaggagat
gaaggacggacagtgggtgaaactcgacaattagatttacctccgtcgaatataccgacc
aaacaaagtcgatgcgaaatagatgacaagttctgtaaatttgaaattaaaaaattgatt
gaaggagatgaaactgtttcgatggtatctgatacctggtcaactgatgttctggcttcc
gatagcgaaataatcgagcaacaagagaaagtattgtatccccattcgtctgagcaagct
cctccagttttaccaacaacgtcagagccagtaccacaagctgtactagatgttagcgaa
actgcatcggaagcatggagtaccgatgtattagctagtgattctgaaagattgacagag
gttgataccgatgatactgctagcgttgcaagatctgatgataccgcaagatccgaaatc
gaagttgaacctcgtagcgaagctgaaataaccgaaaaaaccatgatacaagcgattcct
cgtaagaacaaaaatgttacaacaaccgaatgtgtgtcaacaacgaatcttcgatcgata
tcgataaaccaggaaaatatgcaatttcctacaactgttgttctttcaccaacaaactct
ctctcggcatcgtccttaaatgtaactggacaaaatgcaagcaggtctgattatcaatca
agcgtgacagaatatgtcgacaaaaatcccaacagcattgacggtagctcaacaaattat
gataaatccctttgcgaagacagattagtccatctcatagacaaacttcacattgagaat
ggaaaaagtcaaatggaacaaacttcttcggctcataatcgtatcagtgtagcagcagtt
gcgccagctttattattagccaatcatatatcaccacccacattgtcgagcacagaaaaa
tcgcacaataccaacataaaattagagtcgcaggaattagaaagtagcttagtcagttca
gttgacgaaactgttaacgaaaatggcccggacggtgttgttggattaagtaccgggagt
ttggcatccagcagtagttctggttctgacacacgaagaaaaactacaagttcggagtta
ccactatcaatgggagcaatgaatgagagttgcaatgactgcccgaaaccaaccgtatcc
agtggagccataccaaaaagtattagcttcgatatgactgcggaacgcggagacaaggaa
ttgttggacgatgatcagaagaataaaagaagtttttttggaaaactgaaaatgtctctg
cgaaatcggcggggtaaggcgattcgtggtacagacgatatcggcagatgttacgatcga
gaagccatcggcgataatattgacataggacgacatagattacgtagaataatgtcagaa
gatgtgtcatcagccggtaacccgagcggtgatagcacggacgatatcttagctaaatac
aggaggaaaccgagtgcagcaagcgatacggaagtatctgtagaaagtaatcagtctcgt
acgaaagaacttaccgaggatgaaaggcttcttatagatccaaataacattgagctttcc
tacgcatttgctgatgcaaaaagaaaattgcgaatggtacttagtaccgctgatctccaa
catattccttggagtgctgcatccgagcggaattattggtcgcaaaaagaaaatgaatta
gtcgccttcctgcagttgcagttggcagaagcaatcaatttacaagacagagcgttgata
gcgcatttacacgaaacactacgttgcgttagattatttaacgacgacggctgcagaaaa
ttatttaaatcgttgcgcgaagattaccaaaaacgatctccttatattgcgtatttgatt
agatgtcgtcaaggattactttctacattggctcacttggatagattatgtattagagtg
aaatgtgatcgagatgctgtcaataatcatcttgtatctgcttgcgtgaaagttttttta
gaaaaaaaagaatcccttttactacgtttttgtgatgaatttaaaaagttaacattagca
gatgaaaaacaagacttggtcgatagctttctaagcaaacttaatgcgaaaatagacaat
gattcaatttggcagtgtgcttgtgaaaatcaactaaatttggcaagagttgtagttgaa
aggactgtaatggcacgtgtttaccacaacgcgctttatccaaatggagacggtgacgtt
tatagggaccaattacttcatgatcatattaaaaaactggccaatgttgtaacaccaaac
cacaaggatttacgaattcctaaaatataccattacgaatgtccctggccatgggctcaa
gcagaattagctgtgatatcagcatataagacacctagagataagttgcagtgtgtcttt
cgttgtgctaccaccatcatgaacttgctttcgatggcaaccgagaggggagtacccgca
gctgatgatctaattcctgtattagtctacgttatcattaaaactaacccaccgtcctta
ctttccactgtacaatatgtggatagtttctatgggaatcgattaggaggagaagaacaa
tattggtggacgcaattttgttccgcgattgaatttataaagactatggattaa
DBGET
integrated database retrieval system
