Bombus affinis (rusty patched bumble bee): 126916431
Help
Entry
126916431 CDS
T09368
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126916431
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
126916431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf_CCCH_4
RuvA_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
126916431
NCBI-ProteinID:
XP_050578211
LinkDB
All DBs
Position
5:complement(11096631..11106587)
Genome browser
AA seq
675 aa
AA seq
DB search
MICIHNSICTDSRRSLDAKGYDRLQFVEGDMTVAGKKYVDCIVLETESIADAEDSSYDSD
YEAEDSVGSTNIHSQVELQVSTSGHSDVSRTASDTLAAEFAEYVTVQGSPPVQSPGYTAR
VEFALKLGYTERLVQTALEKLGPDPEQNELLAELIKLGASCSQKSVDTPEELDNVADTDL
MSNENSGCSSSLRSVVIDGSNVAMSHGNKEIFSCRGIKICVDWFKARGHKEITVFVPKWR
KETSRIDNPIADQEILGELERDRLLVFTPSRLVGGKRMVCYDDRYILKLAVEIDGIVVSN
DNYRDLAQENPEFRKVVEERILMYTFVNDRFMPPDDPLGRSGPTLDNFLRTFPKRSDPAP
PCPYAKKCTYGNKCKFRHPERGLHPQKSVTEKLVEHVQKQLQVRGSNPNVFLSSNISTNA
FQHQPLCKTKSTVTTSIQPLPSVTKSRSAENVTLDQPMNSTIHGLQVPPTTSSQGYRSSC
RSTGRLNKPEAEPPNIHKKLQRQLTLNPVYDPRLHQLRQYQQASQTSSLSQQTAITSSTA
QHRALSRHSSNESAYRAGMNWDRSEGGQCHQHVTRIASAPDSYQAWLSNNSNLAVPSGSS
QRLGASDSQLNVPTSPLYSAMSTDMLRDFFDTRTKIHYHLANIFPEEHVRTAMLIHPFET
DPIEICVAILKMYPQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtatacataatagtatttgtacggattcgagaaggtctttggacgcgaaagga
tacgatcgattacaattcgtggaaggagatatgaccgtcgccggaaagaaatacgtagat
tgtatcgtcctggaaactgaaagtattgctgacgcagaagattcttcttacgatagcgac
tacgaagctgaagattcagtgggatctacgaatattcattcccaagtggaattgcaggta
tctacgtcaggtcattcagatgtgtcccggaccgcctcagacacgttggctgctgaattt
gcagaatatgtcacagtgcaaggaagtccaccggttcagagtccagggtacactgcccga
gtagaattcgcccttaagcttggctacacggaacgtttagttcaaacagcgctggaaaaa
ttgggtccagatccggagcaaaacgaacttttggctgagttgataaaactcggtgctagc
tgttctcaaaaatcagttgatacaccagaggagcttgataacgtcgcggacactgattta
atgtccaatgaaaacagcggatgctccagtagtctcagatctgttgtaattgatggaagc
aatgtggcgatgagtcatggaaacaaggaaatattttcttgtagaggaattaaaatttgc
gtggattggtttaaagctcgaggacacaaagaaattaccgtatttgtgccgaagtggaga
aaggaaacttccaggattgataatccgatcgccgaccaagaaattttgggagaattggaa
agggaccgtttgttggtttttactccatccagattagttggtgggaaaagaatggtttgt
tacgatgatcgctatattttgaaactggcggtggaaatcgatggtattgttgtcagcaat
gataattacagagatttggcacaggaaaatccggaatttcgaaaagttgtggaagaaaga
attttgatgtatactttcgtaaacgatcgctttatgccaccagacgatccactaggtaga
agcggtcccactttagacaattttttgagaacttttcccaaaagatctgatccagcacca
ccttgtccatacgcgaagaaatgcacttatggaaataagtgtaaatttcgacatccagaa
agaggtcttcatcctcaaaaatcagttacagagaagttagtagaacatgtacaaaagcag
cttcaagtaagaggttcaaatccaaatgtatttttatccagcaatatatcgaccaatgcg
tttcaacatcaaccgctttgtaaaactaaatcaacggtaactaccagtatccaaccatta
ccttcagttacaaaaagcagatctgcagaaaatgtcacgcttgatcaaccaatgaattcc
acgatacatggtttacaagtgccacctaccacaagttctcaaggttatcgttcttcctgt
cgatctacaggaagattgaataaaccagaagcagagccaccaaacatacataagaaactg
cagaggcagttaactttaaatccagtgtacgatcctcgacttcaccagctgagacaatac
cagcaagcatctcaaacaagttcattatcacaacaaactgcaataacatcttccacagca
cagcacagagccttaagtagacattctagtaacgaatcggcctacagagctggcatgaat
tgggatcgttctgaaggagggcagtgtcatcaacacgtaacacgtattgcttcggcgcct
gattcttaccaagcttggttatcaaataattcgaatttggctgtaccatcaggatcgagt
caacggctgggtgcttcagattcgcagttaaatgtccctacatctcccctgtattcggct
atgtcgacggatatgttaagggattttttcgataccagaacaaaaatacattaccatttg
gcaaatatctttcctgaagaacatgtgagaactgctatgctaattcatccatttgaaaca
gatccaatcgaaatctgtgttgctattttgaaaatgtatccccaataa
DBGET
integrated database retrieval system
