Bombus affinis (rusty patched bumble bee): 126916479
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Entry
126916479 CDS
T09368
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126916479
Membrane trafficking [BR:
baff04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126916479
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
126916479
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
126916479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
Sec3_CC
PTB
Motif
Other DBs
NCBI-GeneID:
126916479
NCBI-ProteinID:
XP_050578266
LinkDB
All DBs
Position
5:8404703..8442290
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AA seq
1279 aa
AA seq
DB search
MITVPISASSPYMKVTSYSDASAIGKKPTVQQFLRNMKESRDVPQRSQSSAASLTSLGAD
ISPSSSHFFEVLYVGKIRVSHPKVSEGFIDDALVRFRVHGLEKSRPSVTNFLSESQRQSL
LTSSNNRRNSTESSASETGSIENVSGNGVISPVNPLGVPSALTGSVETFPKTQNPNLAEK
DEREENRDVTNNNSMQVPEVMRNRASSTGSVLNARRDSIARGSDEHNRTMLFQVGRYDLR
LISPDRKLVLLHKQLRDVASCVQGIKNPEHFGFICKENNVDFFVGYVFKCQSESVADDLV
AAISQAFVGTCEVSRKDRYSVFSCEHCPMYWYNKLCQEIEGQNDRRTQNIIFSRMEMLPE
DEQEIVVSKYKNAEAAGGTGTSLREQNQFLIRLLRAHCETKQARHVHDTAENRSEFLNQY
LGVGVGSTIFMKAKRSLTNSFDNLIKRKGSRDDLGLGHLKDMSHLNTVIQKSGSQSPDMS
RQPSMADISPDSSRPKSLRVSPEQQLTVNTGPKSSMMDIFLKVGNSPKMSPTETDGNNSV
QSNGSWRQAILNRVVTPNKDHEKESDKTGNIGIIKSPQATPTRRTKQELRDLWKKAINQQ
VILIRMEKENARLRVRQEEATVKRIKLEYDELSTCGRELMEVWDLLVSKESRISTKCDNQ
MLLHAIKQGVPKGKRGEVWQFLAEQFCLKQPPIDTRDFPNYNTPYDLLLKQLTSQQHAIL
IDLGRTFPNHPYFSSPLGPGQLALFNLLKAYSLLDHEVGYCQGLSFVAGILLLHMSEDIA
FFLLRHLMFRRGLRKLYLPDMAALQLYLYQLSRLLHDRLPAIYNHFDKHEVSPTLYAAPW
LLTLFASQFPLGFVTRVFDLLFLESTEVLFRVAMALLEEHQDQLLMCDSFEEIMEYLKTR
VPAVDKEILDRVMKRVFYPDQEITKQLNEYRVEYQVLQEEMISMKPQMENLEKLKVLNKQ
LTQEVGQLSGQLEITMNDLHRLETARSMQQSTLHKLESQNRSLEVTVATLGAFIQQLSET
RPDIEFPGEIRRIIAQLSIAEKRRSTANRLYSLKVLEDNNKMGMTKSNSAGRESQNLLKN
NSVMGTPYPLKSTLSQPNLATKLERVSSFFSNSHNHIQKQRAQLAALRNEYANEQGVRND
ENDPKTVNIDIRITDTVNSTEEQNMMQDDNHLKIQQVNLEKSSSLPLNSKMKLKSSKSAY
ELGSVQKVPITKLEVTNDDNVTNLTGTMHPLDTCSDVNFRYGGTTKLKSIKSTRLSSPSG
QDEGMSKNAQNQNIETLNR
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgattaccgtgccgatatccgcttccagtccttacatgaaggttacatcctacagcgat
gcaagcgctattggcaaaaagcctacagttcaacaattcctcagaaatatgaaggaaagt
cgggatgtccctcaaagatcgcaaagtagcgcggccagcctaacgtccctaggtgctgac
atatctccaagttcttcccatttctttgaggtgctctatgtggggaaaatcagagtgtcg
catccaaaggtatcggagggcttcatagacgatgcgttagtaagatttcgcgttcacggt
cttgaaaaatcgagaccgtcggtgactaactttctttccgagagtcagcgccaatcactt
ttaacgtcttccaataacaggagaaatagcacggaatctagtgctagtgagaccggaagt
atagaaaatgtctccggaaatggggtcatatcgccggttaacccgctgggtgtaccgtca
gcactcaccggttcggtggaaacgtttccaaagacgcagaaccccaatctcgccgagaaa
gacgagcgcgaggaaaatcgagatgttacaaacaataattcaatgcaagtaccggaagtt
atgcgaaaccgggcttcctctaccggtagcgtgttgaacgccaggagggattctatagcg
agagggagtgacgaacataatcgcacgatgctcttccaggtaggccgatatgatttgaga
ttaatcagcccggataggaagctggtattgcttcacaagcaactcagagacgtggcgagt
tgcgtgcaaggcatcaagaaccccgagcacttcggttttatttgcaaagagaataacgtg
gatttttttgttggctacgtattcaagtgccaatcggaatccgttgcagatgatcttgtc
gctgctatttcacaggcgtttgttggaacgtgcgaagtttcaagaaaagaccgatattcc
gtgttttcatgcgaacactgccccatgtattggtataacaagttgtgccaggaaatcgaa
ggacagaatgacaggaggacccagaatataattttttcgcggatggaaatgctgccggag
gacgagcaggaaatcgtcgttagtaaatacaaaaatgctgaggccgccggcggtacaggg
acatctttacgcgagcaaaatcaatttttaataagactgttgcgtgctcattgcgagacg
aaacaggctaggcacgttcatgacacagccgagaataggagtgaatttcttaatcaatac
ctaggcgtaggtgttggaagcacaatattcatgaaagcgaaacgctcgcttacaaatagt
tttgataaccttataaagagaaagggttcgcgggatgaccttggacttggacatttaaaa
gatatgagccacctcaacactgtgatacaaaaaagcggtagccaaagccccgatatgtcg
cgacagccgtccatggcagatatttcgccggattctagtagacccaaatctttaagggtt
tcacctgaacaacaattgactgtaaatactggaccaaagagttctatgatggatatattc
ctgaaggtaggaaattcaccaaaaatgtctccaactgagacagatggaaacaattcggta
cagtcaaatggctcatggagacaagctatattgaatcgagttgtaactcccaataaagat
cacgaaaaagaaagcgataaaacaggaaatattggcatcatcaaatcgccgcaggcgacg
ccgacgcgcagaacgaaacaagaattaagggatctgtggaagaaagctatcaatcagcag
gtgatacttatacgaatggagaaggagaacgcaaggcttagagttcgtcaagaagaggcg
actgttaagagaataaaattggagtatgatgaacttagcacttgtggtcgcgagttaatg
gaggtatgggaccttttagtaagcaaagagtcgaggatctctacaaaatgtgataatcaa
atgcttttacatgctattaaacaaggtgtaccaaaaggcaaaagaggagaagtatggcaa
tttttggccgaacaattttgcttgaagcaacctccaatagacacgcgcgatttccctaat
tacaatacaccatacgatttgcttttgaaacagcttacgtcccagcaacatgcaatttta
atagatttaggacgaacatttccaaaccatccatatttcagttcacctctaggacctgga
caattagctttgttcaatttactgaaagcttactcgcttctggaccatgaagttggttat
tgtcaaggtctcagttttgtagctggcattcttcttttacacatgtcagaagatatagcg
tttttcctcctgcggcacttaatgtttcgaagaggcctgaggaaattgtatcttcctgat
atggcagctttacaattgtacctgtatcaattatccaggttgttgcacgatagattgcct
gcgatttataatcattttgacaaacatgaggtttcccccacattatacgctgcaccatgg
ttgctaactttatttgccagtcaatttccacttggttttgttactagagtttttgattta
cttttcttggaaagtactgaggtacttttcagggtagctatggcattgttagaagagcac
caagatcaattattaatgtgtgacagttttgaagaaattatggaatatctcaaaacgcgc
gtaccagctgtagataaagaaattctggaccgagttatgaaacgcgtgttttatccggat
caagagattacgaagcaattgaacgaatatagagtggaataccaggtgttacaggaagaa
atgatatcaatgaaaccgcaaatggaaaatctggagaagttaaaagtacttaacaagcaa
cttacgcaagaagtcggtcagcttagtggacaacttgaaattactatgaacgacttgcac
cgtttggagacagcaagatctatgcagcaatcgactctgcacaaacttgaatctcagaat
cgcagtctagaagtgactgtcgccacattgggcgcatttatacaacaactatctgaaact
cgcccagacatcgaatttcctggtgaaattcgacgaataatcgctcagttaagcatcgct
gagaaacgaagaagcacagccaatagattgtactccctaaaagtgctggaggataataat
aaaatgggaatgaccaagagtaactccgcaggaagagaatctcaaaatttgttaaaaaat
aatagtgtaatgggtactccgtatcctttaaaatccacgttgagccaaccaaatttggct
acaaaactggagagagtctcgtcgttcttctcaaactcgcataatcatattcagaagcaa
cgagcacaattggccgctcttaggaatgagtatgcgaatgagcaaggtgttagaaatgat
gaaaacgatccaaaaaccgtcaatatagatattcggatcactgatacggtaaattcaacc
gaagagcagaacatgatgcaggacgataatcacttgaagatccaacaagtcaatttggag
aaatcgagttcgctgccattaaattcaaaaatgaagttgaaatcgtcgaaatcagcttat
gagttagggtctgttcaaaaagtaccaattacgaagttggaagttacaaacgatgataac
gtgacgaatttaactggaacgatgcatcctctggatacctgcagtgatgtgaattttaga
tatggaggaacgacgaaattgaagtcgataaaatcaacaaggttatcgagcccaagcggc
caagatgaaggtatgagcaaaaacgctcagaaccagaacatagagacgttgaacagataa
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