KEGG   Bombus affinis (rusty patched bumble bee): 126916480
Entry
126916480         CDS       T09368                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
baff  Bombus affinis (rusty patched bumble bee)
Pathway
baff03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:baff00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126916480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:baff03041]
    126916480
   04121 Ubiquitin system [BR:baff04121]
    126916480
Spliceosome [BR:baff03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    126916480
Ubiquitin system [BR:baff04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126916480
SSDB
Motif
Pfam: SART-1 HIND Spe-44 COG6_N
Other DBs
NCBI-GeneID: 126916480
NCBI-ProteinID: XP_050578270
LinkDB
Position
5
AA seq 744 aa
MGSNKRHKTEKSRDAKKKRHRSRSRSYTPEREKSEKHRHHKKHRRKERKDYDSDVEIVNA
PPPPKISKSSHPSTPPPPEISKQHSPSPSKGGGTQTSLSIEETNKLRAKLGLKPLEVDSG
PKDDPNKIKDDLGEFYHKPAPDVNEKLKTQKLKEKIGTQKQKRLIEANLAKVKSLGECES
DDDTRNWIDKTRRLEEEKKKAEERAKMLDQLDEEFGIGNLVKEEIHAARNTAYTEKNLKG
LKVEHNIEKFEEGKTLVLTLKDQQVLEEGEDVLVNVNITDEERYQRNIFNKTKKPGYDAY
DDDNFDEFGFPKKTILEKYDEEIGGTKKDTFTLGINNIKDVKQNKLDYVKQRLANKKLES
LQLAEPKLASEYYNEEELAKFKKPKKKIRKIRKKLKAEDLIPEDNDYLRDLGSRRAKKTE
DVKENDVLDVDDLGAPTEDLSGIKLEEDDKELELQLALKKAQKLKESQLSNIEKVVETIK
QESMGSEESQSGNIVLNATAEFCRTLGDIPTYGLAGNREENGQELMDFEMDGVKEEPPVN
EDEDDGRGAWNTVHLDESTSEPVAMEAAILDAEPSLGHGVGGALKLAMSKGYLQKEDSSR
PSASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSEFKEKDGFKPNVKLEYIDDDGH
VLSAKEAFRYLSHKFHGKGPGKNKVEKRMKKAEQEVLMKRMSSTDTPLGTLNLLQAKQKE
TQSPYIVLSGSKQMQTTSISKSKH
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgggctcgaataaacgacataagaccgagaagagtcgggacgctaagaagaagcgtcac
cgtagccgttcacgaagctacacgcctgagcgcgagaaatcggaaaagcacaggcatcac
aaaaagcatagaagaaaagaacgcaaggattatgatagtgatgttgaaatagttaatgca
cctccacccccaaaaatttctaagtcttcacatccgtcaacgcctccacctcctgaaatt
tctaagcagcacagcccttcgccaagcaaaggcggtggaacacaaacctctctatcgatt
gaagaaactaacaagttaagagcaaagttaggtttaaaaccattagaagttgatagtgga
ccaaaagatgatcctaataagattaaggatgacttgggagaattttatcacaagcctgct
cctgatgttaacgaaaagttaaagacccaaaaattaaaggaaaagattggcactcagaaa
cagaagagactaattgaggctaatttagctaaagtaaaaagtttaggtgaatgcgagtct
gatgatgataccagaaattggattgataagaccagacgtttagaggaagagaagaaaaaa
gcagaagaaagggcaaaaatgttagatcagttagatgaagaatttggaattggaaatttg
gttaaagaagaaattcatgctgcacgtaatacggcttatactgaaaaaaatttaaagggc
ctcaaagtggagcacaatattgagaaatttgaagaaggcaaaacacttgtcttaacgcta
aaagatcaacaagtgctagaagaaggcgaagatgtgcttgttaacgtaaatataactgac
gaggaacgttatcaacgtaatattttcaataaaacgaagaaacctggttacgatgcatac
gatgacgataacttcgatgaattcggtttcccaaagaaaacaattctggaaaaatatgac
gaagagattggaggaacgaaaaaagacactttcacattgggaattaataacatcaaagac
gtgaagcagaacaaactcgactacgttaaacaacgtttagccaataaaaaattagaatcg
ttacaattagcagagccaaaactagctagtgaatattataatgaagaagaacttgcgaaa
tttaagaagccaaagaaaaagattcgaaagattagaaagaaattaaaagcagaagattta
attcctgaagacaatgattatcttcgagatcttggaagtaggagagccaaaaaaaccgag
gacgtaaaagaaaacgatgttttggacgtagatgatttgggagctcccactgaagatctc
agtggaataaaattggaagaagatgacaaagagctggaattacaattagcattgaagaag
gctcaaaaactaaaagaatcccaattatcaaatatcgaaaaggttgttgaaactataaaa
caagagtctatgggttctgaagagagtcaatctggaaatattgttcttaacgccactgca
gaattttgtagaacactaggagacattcctacttatggtcttgctggaaatagagaagaa
aatggacaggagttgatggactttgaaatggacggagtcaaagaggaacctcctgttaac
gaggatgaagatgatggccgtggcgcatggaataccgtgcacctagatgaaagtacatca
gaaccagtagcaatggaagccgcgattttagatgcagaaccttcgctcggacatggcgta
ggtggagcgttaaaacttgctatgagcaaaggttatttgcaaaaagaagatagtagtaga
ccatctgcgtctcgtttcgcacatctacaagctcagaattactcgatagaggacaagact
tacggagatgatgataaatttggtagaagggatcgtttcaatggtccaacatcagaattc
aaagagaaggatggtttcaaaccaaatgtgaagctggaatacatcgatgacgatggtcat
gttttaagtgcaaaggaagcttttcgatatctttcacataaatttcatgggaaaggtcca
ggaaaaaataaggttgagaaacgaatgaagaaagcagaacaagaagttttaatgaaacga
atgtcatctacggatacccctctaggaacgcttaatttattacaagcaaaacaaaaagaa
actcaatcgccatatatagtactcagtggaagcaaacaaatgcaaacgactagcatatca
aagtcaaagcattaa

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