KEGG   Bombus affinis (rusty patched bumble bee): 126916491
Entry
126916491         CDS       T09368                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
baff  Bombus affinis (rusty patched bumble bee)
Pathway
baff03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:baff00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126916491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:baff03041]
    126916491
   03036 Chromosome and associated proteins [BR:baff03036]
    126916491
Spliceosome [BR:baff03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126916491
 Complex B
    126916491
 Complex C
   U2 SnRNP specific factors
    126916491
Chromosome and associated proteins [BR:baff03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    126916491
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 126916491
NCBI-ProteinID: XP_050578288
LinkDB
Position
5:complement(6934812..6942734)
AA seq 1316 aa
MDSIPRTHEDIEAQIREIQSKKKEIQNASTEKDQVGLGKTGFYDQDIYDGSNNKYEGYVT
SIAANDEIEDEDYEPTTFSTNKRPGYTAPAALLNDVAQSEKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDIGSRTYTVIMREQLLKGEETELRKKLAEKAKEGT
LKANGEPKPAPKKRGRWDQTDDAPTPKKPSGTTATPTSWDNADVTPAAIRWDETPGHGKG
GETPGATPGVSTRMWDATPGHATPGAATPGRETPSHEKTVSSRRNRWDETPKTERETPGH
SSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQT
SILTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALFP
PGYKVLQPPAGYIPIRTPARKLTATPTPIAGTPQGFFIQTEDKTAKFVDNQPKGNLPFMK
PEDAQYFDKLLVDVDEETLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALA
IAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRR
NYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRL
EEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVR
QQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKA
HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTA
CAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQ
YTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3951 nt   +upstreamnt  +downstreamnt
atggattccattcccagaacgcatgaagatattgaagcacaaatacgagaaatacagtca
aagaaaaaagaaattcaaaatgcatctactgaaaaggaccaagtggggttaggaaagact
gggttttatgatcaagatatttacgatgggagtaataataaatatgaaggctatgttaca
tctattgcagctaatgatgagattgaggatgaggactatgaaccaacaacttttagtact
aataaaagaccaggctatactgcaccagcagcattactcaacgatgttgcacagagtgaa
aaggattacgatccttttgcggacaggcgacgacccaccatagctgacagagaagatgaa
tataggcaaaaaagacgaagaatgattatatctcctgagcgtgtcgatccttttgcagaa
ggtggtaagacgccagacatcggttctaggacatataccgtgattatgcgggaacagtta
ttgaaaggagaagaaactgagttaagaaaaaaattagcagaaaaagccaaagagggaaca
ttgaaagcaaatggtgaacctaaacctgcacctaagaaaagaggtcgttgggaccaaaca
gatgatgctccaacacctaagaaaccatctggtacaactgcaacaccaacatcatgggac
aatgcagatgtaacacctgctgcaattaggtgggatgaaacgcctggccatggtaaaggt
ggagaaactcctggtgcaacaccaggcgtaagtacaagaatgtgggatgctactccagga
catgcaacgcctggtgcagctactcctggtagagaaactccttctcatgaaaaaactgtt
tcaagtcgtagaaatcgttgggatgagacgccaaaaactgaacgcgaaacacctggtcat
agcagtggttgggcagagactccaagaacagatcgagttgcaggagatttaattcaggag
acaccaacaccttctgctagcaaacgtcgaagtcgatgggatgaaacaccttcgaatcag
acacctgggtctatgacgccacaaactccagcaactcctcttactacaccacatcaaact
tcaattttaacacctagtggtgtaacaccaacagggcctaaagctatgggattggcaact
ccaacaccaggacatttaatgtcaatgacaccagaacagcttcaagcatatcgttgggaa
cgagaaatcgatgagagaaatagaccactctcagacgatgaactggatgccctgttccca
cctggatacaaagttttgcaaccacctgcgggatatattccaattcgcacacctgcaagg
aaactcactgctacaccgacgcctattgcgggcacaccacaaggatttttcattcaaact
gaagataaaactgcgaaattcgtagacaatcaaccaaaaggaaatttgccttttatgaaa
ccagaagacgcacaatattttgataagttattggtcgatgttgatgaagaaacgcttagt
cctgaagaacagaaagagagaaagataatgaagctactattaaaaattaaaaatggcaca
ccaccaatgaggaaagctgctttaagacaaattacagataaagcaagagaatttggcgcg
ggtcctttatttaatcagatactccctcttcttatgtctcctacacttgaagatcaagaa
cgtcatcttcttgtgaaggttattgatcgtattctttataaactggatgatttagttaga
ccctacgtacataagattttggtcgttattgaacctttacttattgatgaagattattat
gctcgtgttgaaggtagagaaattatctctaatttagctaaagcagctggtttagcaacg
atgatctcgactatgagaccagatattgacaatattgatgaatacgttcgtaacacgaca
gccagagcattcgctgtggtcgcatcagctctaggaattccttctttgcttccatttctt
aaagccgtgtgtcgcagcaaaaagtcatggcaagctcgtcacacgggtatcaaaattgta
caacagattgctattcttatgggatgtgctatattaccacatttgaagagtttggttgaa
attatagaacatggtctcgttgatgagcaacaaaaagttcgtactatcactgctttagca
attgctgcattggcagaagcagccacaccatatggtatcgagagctttgactctgttcta
aaaccgctttggaaaggtattcgtacacatagaggaaaaggtcttgctgcattcttaaaa
gctattggttatttaattcctcttatggacgccgaatatgccaattattatactcgtgag
gtgatgttaattcttattcgtgaattccagtctcctgatgaagaaatgaaaaagattgtt
ctgaaagtagtgaaacaatgttgtggaacagatggtgtagaagcacaatacattaaagat
gaaatcctcccacatttcttcaaacatttttggaaccatcgaatggctttagatcgtaga
aattacagacagcttgttgacacgactgtagaaattgcaaataaagttggtgcatcagaa
attataaatcgtgtggtagacgatttaaaagatgaaaacgaacagtataggaagatggtt
atggaaaccattgagaaaataatgggaaatttgggagccgcggatgttgattctcgtttg
gaagaacaactcattgacggtattttatatgctttccaggaacaaacaacagaggatgtt
gtaatgttaaatggttttggaactattgtgaatacattaggaaaaagagtgaaagcatac
cttccacaaatttgtggaacaattttgtggagattgaacaataaatctgcaaaagtaaga
caacaagctgccgacttgatatcacgaattgccgttgtcatgaaaacttgtcaagaggaa
aaactaatgggtcatttaggtgtcgttctttatgaatatttaggagaagagtaccctgag
gtattaggaagcattttgggcgcattgaaagctattgtaaatgtcataggaatgacaaaa
atgacaccacctattaaagacttattaccacgtcttactcctattctgaagaacaggcat
gaaaaggtacaagaaaattgtattgatcttgtaggtagaatcgcagacagaggacccgag
tatgtatccgccagagaatggatgagaatatgcttcgaacttttagaattgctcaaagct
cacaagaaagcgattcgaagagctacagtaaatacatttggttatattgccaaagcaata
ggacctcatgatgtattagcaaccctcttgaataacttaaaggtacaggaacgtcaaaat
cgtgtatgcactacagtagccatagctattgtagctgaaacctgtagtccatttacggta
cttcctgctttgatgaatgaatatagagtaccagaactaaacgtacaaaatggtgtatta
aagtctttatcctttttgtttgaatatatcggagaaatgggaaaagattacatttacgct
gttagcccactactagaagatgcgctcatggacagagatttagtgcacaggcaaactgca
tgtgctgctattaaacacatggcactgggtgtttatggatttggttgtgaagacgcatta
atacatttattgaatcacgtatggcccaatgtttttgaaacttcacctcacttggtgcaa
gcatttatggacgctgtagatggtttacgtgttgctcttgggccaattaaaatactacaa
tacactttgcagggattgttccatccagcacgaaaagtacgagatgtatattggaaaatt
tataattctctttatataggtggacaagatgctcttgtagctggttatcctcgaattatg
aatgatccaaagaatcagtatattagatacgaattggactatgttttgtaa

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