Bombus affinis (rusty patched bumble bee): 126916509
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Entry
126916509 CDS
T09368
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126916509
Membrane trafficking [BR:
baff04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126916509
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
126916509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Lgl_C
Synaptobrevin
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
KNTC1_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
126916509
NCBI-ProteinID:
XP_050578311
LinkDB
All DBs
Position
5:complement(3067104..3141967)
Genome browser
AA seq
1347 aa
AA seq
DB search
MKKFTIKGVLDGFRSSVPQPVKPDQEIVENLRPEHFQVKKTFRHGFPHQPTAVAFDPVQR
LLAIGTKSGSLRILGRPGVDAHVRHEGCTAVVQLQFLINEGALVSATADDTLHLWNFRQK
IPQVVQSLKFQRERITCIHLPLQSKWLYVGTERGNIHVLHIETFVLSGYVINWNKAIEVS
RKTHPGAVVHLSDNPLDLSKMLIGYESGQMVFWDLKTKNAEYRCHSDVPLKSISWHHEGK
QFMCSHTDGSLATWTVRQVKPTNITHPHAKTTKDGEPEPCKPIQKVEWKLSRSGEAYVIF
SGGLAYDTTGRTPSITVIHGKTTTVLEMEHNVIDFITLCENPWTSDYQDPYAVVVLLQND
LVVIDLLTPGFPCFENPYPMDIHESPVTCCAYFADCPSDLVPAFYSVGSKSQKKTGFSEK
DWPISGGEWSSSSSGYNEIILTGHADGSIKFWDASAGTLQVLYKLKTAKLFEKGRTRSID
SEEDPLAIQLIFLCPESRKLAIAGSGRHVVLFKFKKVESMSEVVTLEISLTADPAKEIES
SSDHDSPAGNTSGSSETKNNESNQPLKVKTGLQKRAAGFQATLVCLTIANSGEQAENITA
LSLNSSYGLMAYGNESGVVIIDIVQKISLIVLNTADIGGNTDPCQRVLRSPKRQDELKRE
NEDKARSPSTDQTHGDSTVESEGLLAILADNVQHSQPRGEFHTGSKNEKGTVEESVNETN
KSGGSVNEEDCTKNHGWKGFSLKRQLSKVDLKIKSTFTPTLVTSQNGVGTDSSSQKSSVF
YCNIPENASSLSPVESTVSESSLSSEGSIPGRESPLNDDKKRNNQEAKSPVTEGDKNKSI
LRFSTDNENVIEKSDAVRPVNLTLAESCEMKPPRLMKIVKMKQAKREGRLLSVPNLKFAK
NDPAICDLRCEETNTASESFTCNLIRRFSRVDKYDSSFQRSRSSSMSSLENITTETISCL
TFADSYTKKSDTSPVPTLWIGTSLGSIQTVIFNTPARGERHAHPVVVSTCNGSTFKLKGC
ILSMFFLDCNGALIPYSYESWKDDSMESKERNRSQGKCNSRTSSPSTNTQVATGEGFEDR
QFVVLASEKQARVVALPSQNCQYRQQLAESHIVIKAEITSLKDNVCLVCYISNGHIATYS
LPSLRPLIDVDFLPLIDLSFQTTKHGIVDPMLSIWGHQLFVNGDTDQIAKTLCFSNRGHG
LYLSSPTEIQKFSVSSQFCGELTEMMGDLFTGHDMPEPPKESFFKGLFGGGSRSLDREEL
FGESSGRASRTVAKHIPGPNAATENMRERVTTATGEVNVAHQMVLERGEKLSQLEERTGR
MMSEAEGFSQSAHGLMLKYKDKKWYQL
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttacaattaaaggcgtgctcgacgggttccgatcatcggtaccgcaaccc
gtcaaacctgatcaggaaatcgtcgaaaatttgcggccagaacattttcaagtaaagaag
acattcagacatggctttccacatcagccgacagcagtggcattcgatccagttcaaaga
cttcttgctattggcactaaatctggatctcttaggattttgggtcgaccaggtgtagat
gcacatgtaagacacgaaggatgtacagcagtggtgcaattacagtttttaatcaacgag
ggagcattggtttccgctaccgcagatgacactttgcatctatggaatttccgacagaaa
ataccacaggttgtgcagagtctcaaatttcaaagagaaagaataacatgcatccactta
ccgctacaaagcaaatggttatatgtcggtacggaacgagggaatattcatgtacttcat
atcgagacgtttgttctttctggatatgtaattaattggaacaaggctatcgaagtatct
agaaagacccatcctggtgctgtagtacacttgagtgataatcctttagatttgagcaag
atgctgataggatatgagtcgggacaaatggttttttgggatttaaaaacaaaaaatgca
gaatacagatgccacagtgacgtacctttgaaatcgatatcttggcatcacgagggtaaa
cagtttatgtgtagtcatactgatggttctttggcaacatggacggtgcgtcaagtaaag
ccaacgaatataacgcacccacatgcgaaaactactaaagatggcgagccagaaccttgc
aaaccaatacaaaaagttgaatggaagctgtcaagatcaggggaagcatacgttatattt
tccggtggtttagcgtatgacacaactggccgaactccaagtataacggtgatacatggg
aaaactaccaccgtactagaaatggaacacaatgtgatagacttcataacactgtgcgaa
aatccatggaccagtgattatcaagatccgtatgctgttgtagttctactacaaaacgac
ttggttgtgatagatttattaactcctggatttccgtgttttgaaaatccatatccgatg
gacatacacgagtcacctgtgacgtgctgtgcgtattttgctgattgtccttcggattta
gtaccagctttttattcagttggatcaaagtctcaaaaaaagacagggtttagcgaaaag
gattggccaatatccggtggggaatggagctcaagctcaagcggatacaatgaaattatt
ttaactggacacgctgatggcagcataaagttttgggatgcatcggcaggcacattacaa
gtgctttataaactgaagacagcgaaactttttgaaaaaggtagaacacgtagtatagac
tcggaagaagatcctttagcgatacaactcatcttcctttgtcccgaaagtcgaaaatta
gcgattgcgggtagcggaagacacgttgttttatttaaattcaaaaaagtcgagagtatg
tcggaagtcgtgactttggagatatcactaacagctgatccagctaaggaaatcgaaagt
tcatccgaccatgattctccagctggtaatacttcgggaagtagcgagacaaaaaataat
gaatcgaatcagccacttaaagttaagactggtttacagaagagggctgcaggctttcag
gcaaccctggtttgcttaacgattgccaatagcggagaacaagctgaaaatataacagct
ctcagtttgaattcttcctatggtttaatggcttatgggaacgagtctggtgtagtgata
atagacattgttcagaagatttctttgattgtgttgaacaccgcggatatcggtggtaac
acggacccgtgtcagcgagtactacgcagtccgaaacgtcaggatgaattgaaacgagag
aacgaagacaaagcgagaagtcctagcacagaccagactcatggagactctaccgtggaa
tctgaaggcttattagcaatcctagctgacaatgttcaacattcgcaacctcgcggtgaa
tttcatactggaagcaagaatgagaaagggacagtagaggaatctgtaaatgaaaccaat
aaatctggaggctcagtgaacgaagaagactgtactaaaaatcacggttggaagggattc
agtctgaagaggcaactcagcaaggttgatctgaaaataaaaagtactttcacgccgact
ttggtgacgtctcagaatggggtaggcactgatagtagcagtcagaaatcttccgttttt
tactgtaacatacccgaaaacgcgagttcgctgtctccagttgaaagtaccgtgtccgaa
tcttcattgtcatcagaaggctcgatacctggacgtgaaagtccattaaacgatgataaa
aagaggaacaatcaagaagcgaaaagtccggtgaccgaaggagataaaaataaatcgatt
ttacgattttccactgacaatgaaaacgttattgagaaatcggatgccgtacggccggtt
aatttaacgttagccgagagctgtgaaatgaaaccaccgagactgatgaaaatcgtgaag
atgaagcaagcgaaaagggaaggtcgtttattgtctgtaccgaatttaaaatttgcgaaa
aacgatccagcaatttgtgacctaagatgcgaggaaacaaacaccgcctccgaatctttc
acctgcaatctaataagaagattcagtcgggtagacaaatatgacagttcgtttcaacga
tcaagaagctcgagcatgtcgtcgctcgagaatatcaccacagaaaccatcagctgcctt
acattcgcagattcctacacgaaaaagagcgataccagtcctgtgccaacactttggatc
ggtacatctttaggatctatacaaacggtgatatttaatacacctgctcgtggagaacga
cacgctcatccagtcgttgtttctacctgcaatggatctacgtttaagttaaagggatgt
attctatcaatgttcttcttagattgtaatggtgccctgattccatactcttacgagtcc
tggaaagacgacagtatggagagtaaagaacgcaatagaagtcaaggcaaatgtaatagt
cgaacgtcttctccatcgacgaacactcaagtagctaccggagagggcttcgaagaccgc
caattcgtcgtattagcgtcagaaaaacaagcgagagttgtagcattaccctcgcaaaat
tgtcagtacagacaacaactggctgaaagtcatattgtgattaaagcagaaattacgtct
ttgaaagacaatgtctgtcttgtatgttacatttcaaatggtcacatagctacttatagt
ttgccaagtctgaggccgcttatagacgtcgattttctaccgcttatagatttgagtttt
cagactacaaaacatggcattgtagaccccatgttgtccatatggggtcatcaactcttt
gttaatggcgataccgatcaaattgcaaagacactttgcttcagcaataggggccatggc
ttatatctctcgtcgcccactgagatccaaaagttttctgtatccagtcaattttgtggt
gaattaactgaaatgatgggagacttgtttaccggtcacgatatgcctgagccacctaaa
gaaagtttcttcaaaggcctcttcggcggaggatcacgaagccttgatagagaagagcta
tttggtgaatcaagcggtcgagcttcccgtacggttgcaaaacatataccaggaccgaac
gcagcaacggaaaatatgcgagaacgtgtgacaacagcgacgggagaagtaaacgtggct
catcaaatggttctcgagcgaggtgaaaagttgtcgcaactggaggagcgaacaggacgc
atgatgtccgaagctgagggtttctcgcaatctgctcacggattgatgctcaagtacaaa
gacaagaaatggtatcagctatga
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integrated database retrieval system
