Bombus affinis (rusty patched bumble bee): 126916780
Help
Entry
126916780 CDS
T09368
Name
(RefSeq) nuclear pore complex protein Nup54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126916780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126916780
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126916780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
126916780
NCBI-ProteinID:
XP_050578889
LinkDB
All DBs
Position
5:16870617..16874382
Genome browser
AA seq
621 aa
AA seq
DB search
MSFGTGFGGTTSTPAPAFSFGATASTTATPVKPAGFGTPSFGFSTPATSAPSLFGSSTTP
ATGGFGSGTTFGTPAATGFGNTATGGFASAPTFAASATSFGTTPVFGTPASSGTAFGTTS
TFGSTPASTTGFGTFGTTTTSSLGFGGFSGFGTTTTTSAPSLFGGFGTTSTAPTFGTSTG
FGAFGTKPTATTTTTGFGGFGTGTGFTGFGSGLAQTQQQFQQQQQQQQPVNTISEALYNA
VFNCQLYNDERDNIIARWNLIQALWGTGKAYYYMNAPPIELNQENPLCRFKAIGYSRMPD
ADNNDGLVVLCFNKKKKDVKEGEAQLIGFMNNILGNKPNLSLTIDNIKATGEDKSQVTIF
ITEKGITGAPRKIPASELVAYLSQPMQKQQLVQNGVEDMLPLVKLDPAQLKEYLDNPPCS
IDPRLWKQAQLDNPNPELYIPVPMIGFQQVKHRLKCQEEETTRHRNFLDMAADEIQRLQR
QHTAIQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFESMHSQVSA
PTQFKGRISEMLSQLRMRNHIDTQNQERYAMDPIAQDDIKAYLTMEQQGMAQLIATINSD
LESLKIIKDGMSELLMSHNIS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtacgggattcggaggaacaacttcgacacccgctcctgcgtttagcttt
ggtgcaacggcttccactacggcgacaccagtaaaaccggcagggtttggaacgccatcc
tttggatttagtacgccagctacctcagcaccgagtctcttcggttcctctacaactcca
gcaacgggaggatttggaagtggtaccacttttggtacaccagctgcaactggttttggc
aacacagcaacaggtggttttgcctcggcacctacttttgctgcttctgctactagtttt
ggaactactccggtatttggtacgcctgcttcatcgggcactgcattcggcaccacttct
acttttggtagcacaccagcctctaccactggattcggtacatttggaaccactacaaca
tcctctttaggctttggtggtttcagtggatttggaactacgacaaccacctctgcgcct
tccctttttggaggatttggtactacaagcacagcccccacttttggtacatctacgggt
tttggtgctttcggcacaaaaccaacggcaacaactacaaccactggctttggtggtttt
ggtacaggtacaggttttacggggtttggatctggattagcacagactcaacaacagttt
cagcaacaacaacagcagcaacagcctgttaataccatatccgaagcgttatacaatgcc
gtatttaattgccagttatataacgatgaacgtgacaatattattgcgagatggaacctc
atacaagctttatggggaactggaaaagcttattattatatgaatgctccacctatagag
cttaatcaagaaaatccactatgtagattcaaagctatcgggtacagtcggatgcccgat
gctgataacaacgacggtctggtcgtactttgtttcaataaaaagaaaaaggatgttaaa
gagggcgaagcacaattgatcggttttatgaataatattttgggaaataaacctaattta
tcgcttacaatagacaatattaaagcaactggagaagacaaaagtcaggtgaccattttt
atcactgaaaaaggaattaccggagctccaagaaaaattcctgccagcgagttagttgcg
tatttatcgcaaccaatgcagaaacaacaattagtgcaaaatggtgtagaagatatgtta
cctttagtaaaattagatcctgcgcagcttaaggaatacttagacaatccgccttgttcg
atcgatccacgattatggaaacaggctcaactggacaatcccaatccagaactttatata
cctgtgccgatgatcggcttccaacaagttaaacacaggttaaagtgtcaagaagaagaa
acaacaaggcacagaaatttcctagacatggcggctgatgaaatacaaagattacaaaga
caacatacggcgatacaagctagattaaaggaacatcggaggactctgttagaactacaa
cacagggtgttgcaggtactggtacgtcaagaaattacacgtaaagttgggttgtctctg
caaccggaggaagaagttctaacacgtaggttcgaatctatgcattcccaagttagcgct
ccaactcagttcaaaggtagaattagtgaaatgctttcccaattgagaatgagaaatcat
atagacacacaaaatcaggaaaggtatgcgatggaccctatagcacaggatgacataaaa
gcgtacctaacaatggagcaacagggcatggcacaacttatagcaacgataaactccgat
ctagaaagtttgaaaatcattaaggacggcatgtctgaactcttaatgagtcataatata
tcgtga
DBGET
integrated database retrieval system
