KEGG   Bombus affinis (rusty patched bumble bee): 126916814
Entry
126916814         CDS       T09368                                 
Name
(RefSeq) roquin-2 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
baff  Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:baff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:baff03000]
    126916814
   04121 Ubiquitin system [BR:baff04121]
    126916814
Transcription factors [BR:baff03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    126916814
Ubiquitin system [BR:baff04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126916814
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf-RING_2 zf-C3HC4 zf-C3HC4_4 zf_CCCH_4 Vesi_VP2 Prok-RING_4 PaaA_PaaC zf-C3HC4_2
Other DBs
NCBI-GeneID: 126916814
NCBI-ProteinID: XP_050578965
LinkDB
Position
1:16428426..16437516
AA seq 911 aa
MPIQAPQWTEFLSCPVCCHDFDVAIRGPISLGCGHTICRTCLANLHRKQCPFDQSIINTE
IERLPVNEALLQLVGNPVPTNVATAYQKLLPPEDHANYLVAKRCIEELALYLKPCQTNPS
LATGVGLVSRPMQRKLVTLVGCQLVEPEGRARAVRAARSLGERSVTELILQHQNPQQLNA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLESHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD
QWSALLYGDTSHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLA
AIDPSPETEPPTLAECRAALEAVRTVVAALVEFIQQHGNRKTQDGTHNVGPGQPKYKVSM
CRDLALRGSCPRSTNCTFAHSDMELDKYRSKSRKLSLRSSLPGINHSDAKTDKSVTGSNN
KTFKQNDDLSYHSIKSHDNTHRESFNSMNKVNPIQHHNPTNENNFIGSLTNYMLPSPQGM
LPVVPTKNIDVHCSHYIMPNTPVDYTAPNLNIWDSSQLSSNMTNGISNTKKQRTVAKTLA
MLLQRRMEILNQLETIVNKQVPQMKTNYDIQGDTLSSNFSIWTNTPNNPMISSTNMNCNN
NFRCADPILFDDEFVPFDASSNSKYGPISKLSKNLIRSTNGVQSTNFYADGGTSPTISAY
RSMPTTNSIASWYYGNQPYATIGANGGIQTINNSSFGDSYITFGRNISDTSTHTQFPRPD
NMSKDLILESQKVKQQLRHLEKKINDLKLATQGATFTAGERLAQELQMIEAGIREKENDV
RNWSPYGTVPWIQSSNNLLSSQNFNQDYKPEEEDTYEAGIANDMRELELRWEFELQEQEK
HWSSEEDNSKK
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgccaatacaggcaccacagtggactgaatttctttcgtgtccagtttgctgtcatgac
tttgatgtggccatacgtggtccaatatcgttaggatgtggtcataccatatgtcgtacg
tgccttgcaaatttacatcgtaaacaatgtccttttgatcagagtattattaatacagaa
atagaaagattaccagtaaatgaagctttattacaactggtgggaaatcctgttcccaca
aatgttgcaacagcttatcaaaaattgctaccacctgaagaccatgctaattatttggtt
gcaaaacgttgtattgaggaacttgctctatatctcaaaccatgtcagacaaatccttct
ttagctacaggtgttggacttgtttctcgacctatgcaaaggaaattggtaactttagtt
ggttgtcaattggttgaaccagaaggaagagcacgtgcagtaagggcagctagaagtttg
ggtgaaagatcagttacagagttgatattacaacatcaaaatccacaacaacttaatgct
aatctatgggctgctgtaagagctcgtggatgtcaatttcttgggccagcaatgcaagaa
gaagtactaaaacttgttttattggctttggaagatggatctgctctttctaggaaagta
ttagttatgtttgtagttcaacgtctagaatcacattttcctcaagcttctaaaactagc
ataggacatgttgtacaattgttgtatagagcaagttgttttaaggtatctaaacgagaa
ggagattcatcattaatgcaattaaaagaagagtttagaacatatgaagctttgaggagg
gagcatgatgctcaaatagtgcaaattgcgactgaagctggtttaagaatagcacctgat
caatggtctgcattgttatatggagatacaagccataaatcccatatgcaaagtattata
gataaacttcaaactccacaatcttttgctcaaagtgtacaagaattggtgattgctctt
caacgtactcctgatcctggacaattaagtagtctaagacctcaactagaattgctagct
gcaatagatcctagcccagaaactgagcctcctacattagcagaatgtcgagcagcatta
gaagctgttagaactgtagtcgcagcgttagtagaattcattcaacaacacggtaatcgg
aaaacgcaagatggtacccacaatgtaggtcctgggcaaccaaaatataaagtgagcatg
tgtcgagatctcgcacttagaggctcttgtcctaggtctactaattgtacatttgctcat
agtgacatggaactagataaatatagatcaaaaagtcggaaattgagtctcagatcaagt
ttacctggaatcaaccattcagatgcgaaaacagacaaatcagttactggatcaaataat
aagacatttaaacaaaatgacgatttatcttatcattccataaagtcacatgataatact
catagggaaagctttaattctatgaacaaagttaatccaatacaacatcacaacccaaca
aatgaaaacaattttatcggatcattaacgaattatatgctaccatctcctcaaggaatg
ttacccgtggtaccgacgaaaaatattgacgtacattgttctcattatattatgcctaat
acacctgttgattacactgcacctaatcttaatatttgggattcgtcgcagctttcatct
aatatgaccaatggaatatctaatactaaaaagcagcgaaccgttgccaaaacattggcg
atgttactgcaacgcaggatggaaatattaaaccaacttgaaacgattgtcaacaaacaa
gtgccacagatgaaaacgaattatgacatacaaggagacacactatcatcgaatttctct
atatggacaaacacaccaaataatccaatgatttcttcaacaaatatgaattgcaacaat
aatttccgatgcgcagatcccattctattcgatgatgaatttgtgccatttgatgcatca
tcaaatagtaaatatggaccaatttctaaactatccaaaaacttaatcagatctactaat
ggcgtacaatctactaatttctatgcagatggaggaacatctcccacaatatctgcttat
cgatctatgccaaccacaaattctattgcgtcttggtattatggaaatcaaccttatgct
acaattggtgcaaatggaggaatacagactatcaataacagtagttttggagatagttac
attacatttggtcgtaatatatccgatacgtcaacgcacacgcaatttccacgaccagat
aatatgtctaaagacttaatccttgagtcacaaaaggtaaaacaacaattaagacatctt
gagaagaagattaatgacttgaagcttgccacacaaggtgcaacttttacggccggggaa
aggttagcacaagaattacaaatgattgaagctggcatcagagaaaaagaaaacgacgta
cgaaattggagtccatacggtaccgtaccttggattcaatcgtcgaacaatttacttagt
tctcaaaatttcaatcaggattataagcccgaagaagaagatacctatgaagcaggtatc
gcaaatgatatgcgggaattagaattacgatgggaattcgaactgcaagaacaggaaaaa
cattggtcaagtgaagaggataattctaagaaataa

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