Bombus affinis (rusty patched bumble bee): 126916866
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Entry
126916866 CDS
T09368
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126916866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126916866
03012 Translation factors [BR:
baff03012
]
126916866
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126916866
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126916866
Translation factors [BR:
baff03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126916866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ResIII
ATPase
AAA_14
NPHP3_N
AAA_19
PhoH
ABC_tran
NACHT
NB-ARC
RsgA_GTPase
Sigma54_activat
AAA_16
SRP54
TsaE
Motif
Other DBs
NCBI-GeneID:
126916866
NCBI-ProteinID:
XP_050579066
LinkDB
All DBs
Position
5:8114194..8118873
Genome browser
AA seq
977 aa
AA seq
DB search
MFHPYRLFSAQRMYSRRRHGDRGESSQSGGSHFERDSRGRGRGGGHPPWLKGKEIGLYYR
DKAREKAKKKETRVIKLPEHLQEKIGHMLNNSKGYYEKLYNNAYTEDTYGVLENKYVHIR
DSQFKRKFINMVSGNMQENLARALLVKSKLEKDIELDKKLLNEHRTLQLTQEYENMKQFR
LKLPSHHKRSRILELIKENQVIVISGETGCGKTTQVAQYILDDQIEQENGSTVRIICTQP
RRISAISVAERVAAERGERLGKSVGFQIRLEKVLPRDRGSITFCTTGMLLQFMQGDPALK
EFSHIILDEIHERSTESDFILALLKLIIPKRPDLKVILMSATLNSERFSSYYNDCPMIHI
PGFTYPVTEFYLEDILSFTEYQFPPSAAIPQDHRKHIKKYKQEQRKRDEFHDVLYPYVRQ
LIATKKYSKEVIEQLRNPNSEKLSLDLIEQLVRYICKTKDSGAILVFLPGMMDIIKLHKI
MLENRQYPQNQYVIYPLHSRMPTVDQKLVFKTPPEGVRKIIIATSIAETSITIEDVVYVV
DCGKMKFGKFDLQKNIQTLEPEWVSLANAKQRRGRAGRVKAGVCYHLYSKAREMALDQYP
LPEMLRTRLEEVILQIKMLQLGKARTFLASVMDPPNMKAIDLSLDLLRTLNALDDEEQLT
PLGYHLAQLPVDPRTGKMIIWASLFSCVEPVFAIAASLSFKDAFYCPFGKEEDARKKKLE
LNMNQFSDHIALSEALRRFEIAYKKSYASSFCREYFLSFSTLKLLSEMKTQFAQHLCQMK
FMDSENPADINANRNSSNITLVKAVVCAALYPNIAIIRRVTKNGTRAWTPEDGSVTIHPS
SVNDRVREYPNPFITYFTKQLSTAIYLHDTTCVSASILLFTAPKMSIRKEKGNYFISLAN
SQIFACDLQSAQLIQKLQEQFNNMLEYKITHPGTVCWNSVEGDVLNAIIELVSQKDEELG
FSNSDIQNCEDDMHDTV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgttccatccttaccgattattttcagcacaaagaatgtattcgagacgtagacatgga
gatagaggtgaaagttctcagtcaggagggtcacattttgaacgtgacagccgtggacga
ggcagaggaggaggacatccaccttggttgaaaggcaaagaaatagggctttattataga
gataaggctagagaaaaggccaagaaaaaggaaactcgagttattaagttacctgaacat
cttcaagaaaaaattggacacatgttaaacaattctaaaggatattatgaaaaattatat
aacaatgcatacactgaggatacgtatggtgtgttagaaaataaatatgtgcacattcgt
gactcccaatttaaaagaaaattcataaacatggtatctggtaatatgcaagaaaatctt
gccagagctttgctggttaaatcaaaattagaaaaagatattgaactagataaaaaatta
ttaaatgaacataggacattgcaattaacgcaggagtatgaaaacatgaaacaattcaga
ttaaagttaccatctcaccataaaagatcaagaatattagaattgattaaggaaaatcag
gttattgtaataagtggagaaactggttgtggaaaaacaacacaggttgctcagtatata
ttggatgaccaaatagaacaagaaaatggtagcactgtgcgaattatatgtactcaacct
aggaggatatcagctatatctgttgctgagagagttgcagctgagagaggagagaggctt
ggtaaatccgttggttttcaaatccgacttgaaaaagtattaccaagagatagaggcagt
ataacattttgtactactggaatgttattgcaatttatgcaaggtgatccagccttaaaa
gaattttctcatattatattagatgaaattcatgaaagatctaccgaaagtgacttcatc
cttgctttactgaaactaattatccctaaaaggcccgatttgaaagttattttaatgagt
gcaacacttaactctgaaagattttccagttattataatgattgcccaatgattcatatt
cctggctttacttatccagtaacagaattttatttagaggacattctatcctttacagaa
tatcaatttcccccatcagctgcaatacctcaagatcatagaaaacatatcaaaaaatat
aaacaggaacaacgaaaaagggacgagtttcatgatgtgctatatccttatgtacgacag
cttatagctacgaagaaatattcaaaagaagtaattgaacaattacggaatccaaacagc
gagaaattgtctcttgatcttatagaacaattagttaggtacatttgtaaaactaaagat
tctggagctattttagtttttcttcctggtatgatggatataataaagctacataaaatt
atgctagaaaatagacagtatccacaaaatcagtatgttatttatcctcttcattctcgt
atgccaactgtcgatcagaagctcgtatttaaaacaccacctgaaggagttcggaagata
ataattgcaacttcgatagccgaaacttctataactattgaagatgtagtatatgttgtt
gattgcggaaaaatgaaatttggtaaattcgatctccaaaaaaatattcaaactttggaa
cctgaatgggtatcgttagctaatgctaaacaaagaagaggtagagcaggcagagtaaaa
gctggtgtctgttaccatttgtactcaaaagctagagaaatggcactagatcagtatcct
ttacctgaaatgttaaggacgcgtttagaggaagttattttacaaataaaaatgttacaa
ttgggaaaagctagaactttcttagcaagtgttatggatccgccaaatatgaaagctata
gatctatctttggatttactccgaactctcaacgcgttagatgacgaggaacaattgact
cctttagggtatcatttggctcaattacctgtagatccacgaacagggaaaatgatcata
tgggcatcattattttcgtgcgtagaaccagtttttgcaatcgcggcgagtcttagtttt
aaagatgctttttactgtccatttggaaaagaggaagacgcacgaaaaaagaaactcgaa
ttaaatatgaatcaatttagcgatcatatcgcgttatctgaagcattaagaagatttgaa
atcgcgtataaaaaaagttatgcaagttctttttgtagggaatatttcctctcttttagt
acgctcaaactactttctgaaatgaaaactcaatttgctcaacatttgtgtcaaatgaaa
tttatggattcagaaaatcccgctgacattaatgctaacaggaactccagtaacataacc
ttagtgaaagcagtagtatgtgctgcattgtatcctaatattgctattataaggagagtt
acaaaaaatggaaccagagcatggactccagaagatggtagcgttactatacatccgtca
agtgtaaatgatagagttagggaatatcccaacccatttattacatattttacaaagcag
ctctcgacagcgatatatttgcatgatactacatgcgttagcgcgtcaattttattattt
actgctccaaaaatgtctataagaaaagaaaaaggaaactattttatcagcttagcaaac
agtcaaatatttgcttgcgatttgcaaagtgcacaacttattcagaaattacaagaacaa
ttcaataatatgttagagtataaaataacacatcctggaacagtatgctggaatagcgtt
gaaggcgatgtattaaatgctatcatagaactggtttctcaaaaagacgaggaattggga
ttttctaattccgatattcaaaattgtgaggatgatatgcatgatacagtttga
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