Bombus affinis (rusty patched bumble bee): 126916917
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Entry
126916917 CDS
T09368
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126916917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126916917
Spliceosome [BR:
baff03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
126916917
Complex C
U4/U6.U5 tri-SnRNP related factors
126916917
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
126916917
NCBI-ProteinID:
XP_050579175
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All DBs
Position
5:complement(12872883..12876142)
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AA seq
393 aa
AA seq
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MQVQEAEGADGSPWNNSSGCDEERRPTQKEGKKSNILPLWGNERTMNLNPLILTNIQSSH
YFKVNLYELKTYHEVIDEIYYKVSHLEPWEKGSRKTAGQTGMCGGRFMQVRGVGAGGIVS
TAYCLLYKLFTLRLTRKQLNGLINHLDSPYIRALGFMYIRYTQPPADLFSWYSDYLEDED
ELDVKAGGGQVMKMGDILKQFLTKLEWFSTLFPRIPVPIQKELEHRLAERFPQQSMNARN
AKPPITLNSHGKYSNSSSRKDNGNLTSRNQPRHIPDSEAQWGEAERTSHWRARSDEDRKD
KYRDRDRERDRIRERERERARERDRERDRHCRRSNSRDRSRRQREHRSRSRDRSHRDRSK
DRYRDKDRHRDRRGSPYDYATELARERERQRRE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgcaagaggcggaaggagctgatggttcaccatggaacaattccagtggttgc
gatgaagaacgtcgtccaactcaaaaggagggtaaaaagtcgaatatattacctctatgg
ggaaatgaaaggactatgaatttaaatccactaattttaaccaacatacaatcgtcacat
tattttaaagtgaatttatatgaattaaaaacataccatgaggttatcgatgaaatttac
tataaggtgtctcatttggaaccatgggagaaaggaagcagaaaaacagcaggccagact
ggcatgtgcggaggtcggttcatgcaggtccgaggagttggtgctggtggaattgtctca
acagcttattgtctactgtataaactcttcaccttgagattaacacggaaacaattaaat
ggtcttatcaatcaccttgattcaccatatattcgggcattaggatttatgtatattaga
tatacacaaccaccagcagatctatttagttggtatagtgattacttagaagatgaagat
gagttagatgtaaaagctggtggaggacaagtaatgaagatgggtgacattctcaaacaa
tttcttactaaattagaatggttttcaacgttatttccaagaataccagtgcctatacaa
aaagaactcgaacatcgattagcagaaaggtttccacaacaatctatgaatgcccgaaat
gcaaaaccacctattaccctaaatagtcatggaaaatatagtaacagcagtagtaggaaa
gataacggcaatctcacctcacggaatcaaccgcggcatataccagatagcgaagctcag
tggggtgaggctgaaagaacaagtcactggcgagccagatctgatgaagaccgtaaggac
aaatacagagaccgagatcgtgagcgagatcgtataagagaaagagaacgagaacgtgcc
cgtgaaagagatcgagaaagggatcgacattgcagacgatcaaacagccgtgatcgaagt
cggagacaaagagaacatagaagtcgtagcagagacagatcacatagagatagaagtaaa
gatcgttatcgtgataaagatcgtcatagggacagaagaggatcaccctatgattatgca
acagaacttgctcgtgaaagggaaagacaacgaagagaatga
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