Bombus affinis (rusty patched bumble bee): 126916978
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Entry
126916978 CDS
T09368
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126916978
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
baff01002
]
126916978
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126916978
03036 Chromosome and associated proteins [BR:
baff03036
]
126916978
03400 DNA repair and recombination proteins [BR:
baff03400
]
126916978
Peptidases and inhibitors [BR:
baff01002
]
Metallo peptidases
Family M67
126916978
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126916978
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
126916978
BRISC complex
126916978
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
126916978
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
126916978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Sod_Ni
UPF0172
Motif
Other DBs
NCBI-GeneID:
126916978
NCBI-ProteinID:
XP_050579309
LinkDB
All DBs
Position
5:9173596..9175565
Genome browser
AA seq
251 aa
AA seq
DB search
MSAFTLSKVELQTDVYMVCLQHALSTESFEVMGLLMGDTVRDVAKIIAVIILRRLDKKKD
RVEISAEQLLKAVTEAERLSEELKRPVRVLGWYHSHPHITVYPSHLDIRTQTNYQTMDHG
FVGLIFSVFSESKETKEQEISLICFQSHNEKVIEIPLEIVHTPISNTCLKTMTDLLKLLV
QEEDEMAETFKDHQDILANIYNNAVRTRTLVHITDIITKPLVLMFKKRIALNKLRAAYLR
RQLQELQKMCN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttacattgtcaaaagtagaattacagactgacgtatacatggtgtgctta
caacatgccctatcgacagaaagctttgaagtaatgggtctactaatgggggatacagta
cgtgatgttgcaaaaatcatagctgtcattattttacgacgtctggacaaaaagaaagac
agagtagaaatttcagctgaacaattgttgaaagctgttactgaagcagaacgcttaagt
gaagaattgaaacgtcctgtgcgtgttcttggatggtatcattctcatcctcatatcaca
gtttatccatcgcatcttgatattagaactcaaacaaattaccaaacaatggatcatggt
tttgtgggtttaatattttcagtattttcagagagtaaagaaactaaggaacaagagatt
tctttaatttgtttccaatctcacaatgagaaagtaatagagattccattagaaattgtt
catacaccaatatcaaatacatgtttaaaaacaatgacagatttgctaaaacttttggta
caagaagaagatgagatggcagaaacatttaaagatcatcaggatattcttgccaacata
tacaataatgctgtgagaactcgaacattggttcacataacagatataattactaagcct
ttggtgttaatgtttaagaaaaggatagctttaaataaattacgcgctgcgtatcttcga
aggcaactacaagaactacaaaaaatgtgtaactga
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