Bombus affinis (rusty patched bumble bee): 126917033
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Entry
126917033 CDS
T09368
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126917033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126917033
03036 Chromosome and associated proteins [BR:
baff03036
]
126917033
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126917033
Coactivators
SAGA/TFTC/STAGA complex
126917033
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
126917033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
126917033
NCBI-ProteinID:
XP_050579362
LinkDB
All DBs
Position
1:complement(11525917..11535095)
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AA seq
958 aa
AA seq
DB search
MASAKFLEEALSTDVDESAVNAIVGSLETQLVTSTPAVSGHQVSSASVSQQNHQVNSGIS
NGGTITAVQPQKHGVSNGGGATTVNSLMNQEVTKPITTSTLLPVNVVTSNTVAPQVTTQQ
QQQHTQSAVPPAAYINQATTNQVTSNQTTNIPSLTKTHEPVKIIYPTVGQVIATTGVANA
NNKLSFPAQTVGQLANGTLGITSPAVLQTASNVSNVGSVSETGSQTVASVNKPTGTALVI
KTSVAPSGMVSVPMSVPVSVAGNAVSTALQGKAGVTSTIVPSNVQILNVNAMRPGTPVTG
QQAGKQVAPRVVIGQHMLGTRPGGPGITLQTLHGLQPGTQGHILLKTETGQFQLLRVGPA
PTAGTPGGTAVTPNSIAGNAVVAAPSPGTTYRLASVPAVSRLNTQFTGPPLATLRKSIQT
VAATITTATTTPSTVTAAASSTPTPPVTTVQTVQTSTPRPTTDNTKEKCRKFLANLLELS
SREPKAVERNVRTLIQELIDVKVEPEEFCDRLERLLNASPQPCLIGFLKKSLPLLRQSLV
TKELVIEGIKPPPANVVFPVTSTTSVVTQQNQLRPTVAVTAATIPVTAVTPTTQVRVMTP
LPAATTTVPRPAQPVQQRLIRPVTTAVRSPAPYTVKSTAAITGIRPTVPTVQKPPITTVV
KTVPTITQGKTVNTATTVNKAIVPSFVPKPVTKEKEKKTFSSAGYTGDDDINDVAAMGGV
NLAEESQRILGSTEFVGTQIRSCKDEVFLHMTPLQQRIKQIVSNYGLEEPNQEVAALISH
AAQERLKNLVEKLAVIAEHRADLIKVDPRYEVTQDVRAQLKFLEDLDKVERRRHEEQERE
ILLRAAKSRAKTEDPEQAKLKAKAKEMQRAEMEELRQREANLTALRAIGPRKKPRLDIGV
SVNSPGSNSGLNASATGINRQMPMKPRLKKVNFRDLLFLLEQEKETCRSTMLYKSYLK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaagtttctggaggaagctctgagcacggacgtcgatgaatctgcagtg
aacgcgatagtgggctcccttgaaacacaactagtaacatctacgccagctgtatctggt
catcaagtaagttctgcatcagtcagccagcagaatcatcaggtgaacagtggtatttcc
aacgggggcaccatcaccgcggtacaaccacagaaacatggggtttcaaacggcggtggt
gctactacagtaaatagtctgatgaatcaagaagttacgaagcctattaccacgagtact
cttctccctgtaaacgtggttacctcaaacacagtggcgccacaggttactacacaacag
cagcaacagcatacacagtcagcagtcccccctgctgcttatatcaatcaagctactaca
aaccaggtgaccagcaatcaaacaacaaatataccaagccttaccaaaacacatgaacct
gtcaaaataatttatcctactgttggtcaagtaatagcaaccacaggggtggctaatgca
aataataaactttcttttcctgcacaaactgttggacaattggccaatggtactttggga
ataacttcaccggcagtgttacagacagcatcaaatgtttctaatgttggttccgtcagt
gaaacaggcagtcaaacagttgctagtgtaaataagccgacaggtacagctttggtgata
aagactagtgtagcaccaagtggcatggtttctgttccaatgtctgttcctgtttctgtg
gctggcaatgcagtcagcacagcactacagggtaaagctggagttacatctacgatagta
cccagcaatgtgcaaattcttaatgttaatgcaatgcgtcctggtacaccggtgacagga
caacaagcaggcaagcaagttgcacctagagtagtgattggtcaacacatgcttggaaca
agacctggaggtccagggataacattgcaaacattacatggtctgcaacctggaactcag
ggtcatatactattaaaaacagaaactggacagtttcaattactaagggtagggccagct
ccaacagcaggtacacctggtggtactgcagttacaccaaatagtatagcaggaaatgca
gtggttgctgcaccatctccaggcactacctatcgcttagcctcagtgccggctgtaagt
aggctgaacacacagttcactggcccaccactcgccacgttaagaaaatctattcagact
gtggctgcaactattacaacagcaactacaactccatcaacagtaactgctgctgcttca
agtactcctactccacctgttactactgttcaaacagttcagacatctacaccacgtcca
actacagataataccaaagaaaagtgccgtaaatttttagcaaacttgttagagttgtct
agtcgagaacctaaagctgtggagcggaatgttcggactttaatacaagagttaattgat
gttaaagttgaacctgaagagttctgtgataggcttgagcgattattaaatgcatcacca
caaccatgtctgattggatttctcaagaaaagtttgccacttttacgtcaatctctcgtt
acaaaggaattggtcatagagggaataaaacctcctccagccaatgttgtttttcccgta
acatctactacttctgtagtaacacagcagaatcagcttagaccaactgttgctgtgaca
gctgcaacaattcctgtaactgcagttactccaactacacaagtaagagtaatgactcca
ctacctgcagctacaactacagttccacgacctgcgcagccagttcaacaaaggctgata
cgacctgttacaacagcagttcgtagtcctgcaccatatactgtgaaatcaacggcggcg
ataactgggattcgacctactgtgcctacagttcaaaaaccaccaattacaactgttgtt
aaaacagttccaaccataacgcaaggcaaaacagtcaacacagccactactgttaataaa
gccatagtgccttcttttgttccaaagccagttactaaagagaaagaaaaaaagacattt
tcgtctgcaggatacacgggagatgacgatatcaatgatgtcgcagctatgggtggtgtt
aatctcgccgaagaatcgcaaaggattcttggttctacagaatttgttggaacacaaatc
agatcctgtaaagatgaagtattcttacatatgacaccattacagcaaagaataaaacaa
atcgtttccaattatggattagaagaacctaatcaagaagttgcggcattaatatctcat
gctgcacaagaaaggttaaaaaatttagtagaaaaattagcagtgatagcagaacataga
gccgatttgataaaggtggacccacgttatgaagtaacacaggatgttagggcacaatta
aaatttttagaagatttggataaagtggaacgtagaagacacgaagaacaagaaagagaa
atacttttacgtgcggcaaaaagtcgcgcaaaaactgaagatccagaacaagccaaatta
aaagcaaaagctaaagagatgcaacgtgcggaaatggaggaattaagacaaagggaagca
aacttgacagctttgagagcaattggtccacgtaaaaagcctagacttgacataggagtg
tctgtcaatagtcctggcagtaattctggtttgaacgcttcagcgactgggattaacaga
caaatgccaatgaaaccacgtttaaagaaagtgaatttcagagacttattgttccttctt
gaacaagaaaaagaaacgtgtaggagcacaatgctatataaatcatacttgaagtga
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