Bombus affinis (rusty patched bumble bee): 126917040
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Entry
126917040 CDS
T09368
Name
(RefSeq) ubiquitin-protein ligase E3C isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126917040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126917040
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
126917040
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
HECT type E3
126917040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF5908
Motif
Other DBs
NCBI-GeneID:
126917040
NCBI-ProteinID:
XP_050579380
LinkDB
All DBs
Position
6:15693850..15698641
Genome browser
AA seq
1062 aa
AA seq
DB search
MLLKRNRNIMYSFEGDYRRKPQQNLAGASRRDEKSVLLQHAQLERLKREQQRKRHNAALK
IQALIRGFIVRKHMKIIKRKEFDEEQQISSRRNLNLDELTIYFQKLLFFYNHTLDASRLV
WILQHFLKHQQEIKQKCVNCPEWLWRLRWILRMCMQHNSEALMNGAYSLAIPLRALETFT
SREDAEKILHENSYRYLGNIFIYLIKHKYFDQLRKLIDNKVPSMLEPASVAPTPISKCLL
DMIKRPLDLISFLEHEDNFSMLVLQELCKSILSSKISDPIRMFIIPSLSEFVEFPYNQLI
KCIDRIELEPTISLLYSILSLESNRISTCKSKDVVINYLQVLASMSSTIIPLTVEENIEQ
GSDSDSESTANMIDQDQADILHECIEMLNEEQRVHGILLAVDRSKDPAVLQPLCQLCHHL
LITDKLAIHKYKLLYMLAFKPAFLKNLWSALLSACQMSLFGGATPLLQIISRGIGLSTED
TKKIVPLLAVFCSLFSLLIATLHDTEFFIQDQSLDINGQQTMPFTTSELVLLSSHLKGVC
LGLVELAFPDSRPTVRDDYKRAVLGPSCSLQNQQDTQMWTHLFKVTVGLLRQLHMRDLRQ
QFCPEGHWIASNIVIPIDKPQDFTFRRRRLRGYIPFQGLRVFTREDLEEGPPLSAKEVRT
LTLLREIPFVVPFNNRVVAFQSLIYRDKTEQQGELTHFMQGPSIQISVRRNYLYEDAFEK
LSPENEPELRLKMRVQLFNTAGLEEAGVDGGGLFREFLSELLKTSFDPNRGFFRLTKDNM
LYPNPTVQLLVDDFPKHYYFIGRILGKALYENLLVELPFAEFFLSKIVGRQSDVDVHHLA
SLDPIMYRNLLYLKSYKGDVADLGLDFTVLSDELGERRIDELKPGGANIPVTNHNRIEYI
HLMADYKLNKQIRAQCYAFKQGIGSVIPLDWLQMFNNKELQVLISGAQIPVDVNDLKLHT
NYTGGYAPDHPTIIAFWKVVNEFNDQQKGQLLKFVTSCSRPPLLGFKELDPPFCIQHAGS
VDRLPTSSTCMNLLKLPEFPDEKTLREKLLYAIQAGAGFELS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgctattaaaaagaaatcgaaacatcatgtacagttttgaaggagattacagacgtaag
ccacagcaaaatttagcaggtgcaagtagaagagatgagaagtcagttctgttgcagcat
gcacagttagaacgtttaaaacgagaacaacaacgtaaaagacataatgcagcattgaag
attcaagcacttatacgtggttttatagtaaggaagcatatgaaaataattaaacgaaaa
gaatttgatgaagaacaacaaataagtagtcgtagaaatttaaatttagatgagttaaca
atatatttccaaaagttattgttcttttataatcacaccttggatgctagcagactagtt
tggatacttcaacattttctgaaacaccaacaagaaatcaaacagaaatgcgtgaattgt
ccagaatggctatggagattaagatggattcttcgcatgtgtatgcaacataactcagaa
gctttaatgaatggagcttattcattggctataccattaagagcattagaaacatttaca
agtcgagaagatgcggaaaaaatcctacatgaaaatagttatagatatctaggaaatatc
tttatttatttgataaaacataaatattttgatcaattaagaaaattaatagataataaa
gtcccatctatgttagaaccagcctctgttgcaccaacaccaatttcaaaatgtttactg
gacatgattaaacgaccattagatttaatttcttttttagaacatgaagacaatttctct
atgcttgttttacaagaactttgtaaaagtatattatcttctaaaatatctgatccaata
agaatgtttatcattccatcattatccgaatttgtagagtttccatataatcaactaata
aaatgtatcgatagaatcgaactagaaccaacaataagtttactttattccattttatct
ctggaatcaaatcgaatttccacatgcaaatctaaagatgttgttattaattatttacaa
gttcttgcatctatgagttcaactataataccattaactgttgaagaaaacatagaacaa
ggaagtgattcggactctgaatctactgcaaatatgattgatcaggatcaagccgatatt
ttacacgaatgtatagaaatgctgaatgaagagcaacgtgttcacggaatactcttagcg
gtagatcgaagcaaagatccagctgtattgcaaccattgtgccaactctgtcaccatttg
ctaattactgacaaattagccattcataagtataaactattatatatgctcgcttttaag
ccagcatttttaaagaatttatggtctgctctattatcggcttgtcaaatgtccctattt
ggtggagcaacccctctcttacaaatcatatcacggggaattggtctttctacggaagat
acgaaaaaaatagttccattgttagccgtattttgttcactatttagtttacttatagca
acgttgcacgacacggaattttttattcaagatcaatctttagacattaacggacaacaa
acgatgccgtttactacttcagaactggtattgctgtcaagtcatttaaaaggcgtttgc
ttaggtttggtagagcttgcatttcccgatagtcggccgaccgtacgagacgattataag
agagctgttcttggtccttcatgttctctgcaaaaccaacaggacacgcaaatgtggacg
catttgttcaaagtaacagtcggtttattacgccagctgcacatgcgagacttaagacag
caattttgtccagaagggcactggatagcttcgaatattgtaataccaattgataaacct
caagatttcacatttcgcagacgtagattgagagggtatattccctttcaaggattacga
gtgttcacccgagaagacttagaagaagggccacctctttccgcaaaggaagttcgaacg
ttgacactccttcgcgaaataccatttgttgtgccgtttaataatcgagtagtggcattt
caatcgttgatttatcgagataaaacggaacaacaaggtgaactgacgcacttcatgcaa
ggaccgtcgatacaaatatcggtaagaagaaactatctctacgaggatgcgtttgagaaa
ttgtcaccggaaaatgagccagaattgcgattaaaaatgcgtgtacagctttttaataca
gctggtttagaagaagctggtgtagacggtggtggtctgtttagagaatttttatcggaa
ttgttaaaaacaagcttcgaccctaacagaggctttttcaggcttaccaaggataatatg
ctgtatccaaatcctacagtacaattattggttgacgatttcccgaagcattattatttt
atcggtagaattcttggaaaagctttgtacgagaatttattagtcgaacttccgttcgca
gaattttttctatcaaagatcgttggacgtcagtcagacgttgatgttcatcatttagct
tccttagatccgattatgtataggaaccttttgtacctaaaaagttacaaaggcgatgtt
gcggatcttggtttggatttcactgtattatcggatgaactcggtgaaagacgaatcgat
gaattaaaaccaggcggtgctaatattcctgttacaaatcataatcgtatcgaatatatt
catttgatggccgattataagttaaataagcagattagagcgcaatgttatgcattcaaa
caaggtataggtagtgtgattcccttggattggcttcaaatgtttaataataaggaactg
caagttttgatatcgggtgcacaaatcccggtcgatgtgaatgacttaaaattgcatact
aactacacaggaggatatgcccctgatcatccgacaatcattgcattttggaaagttgtt
aatgaatttaacgaccagcaaaaaggacaattactcaaattcgttacgagctgcagtcga
ccgcctttacttggatttaaggaacttgatccgcctttttgtattcaacatgccggcagt
gttgatcgcttgccgacttccagtacctgtatgaatctgttaaagctaccagaatttcca
gatgagaaaactctacgcgaaaaacttttatatgcgatacaagctggtgcaggtttcgaa
ttgagttaa
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