Bombus affinis (rusty patched bumble bee): 126917049
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Entry
126917049 CDS
T09368
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126917049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126917049
03036 Chromosome and associated proteins [BR:
baff03036
]
126917049
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126917049
Coactivators
SAGA/TFTC/STAGA complex
126917049
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126917049
STAGA complex
126917049
TFTC complex
126917049
SAGA complex
126917049
SLIK complex
126917049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD40_like
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_NWD2_C
VPS8_N
DUF5713
Motif
Other DBs
NCBI-GeneID:
126917049
NCBI-ProteinID:
XP_050579393
LinkDB
All DBs
Position
6:15448784..15451949
Genome browser
AA seq
652 aa
AA seq
DB search
MDNDKSTMLAVLQLLRKYNLKGTEELFKKEANLIDISPDEAQQTDSEVNSVLSAYKSEGD
PALYEKAYSELKKFVEGSLDIYKHELGTILYPVLVHMYLELVYNNHSEEAKQLLERFGRN
LEEYYQNDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHCVLL
NIIQEHLYFDMYEGVARNKQQIDATSGAMVGEATRQDNKAKVFYGLLKEPDIQCMPPTEE
EEDDTGGVDGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKGKALREA
SKRVVLGPDTLPSICFYTLLNTVHSVTAAEVAEDSSLLAIGFGDSCIKVWSLVPQKLRLM
KTGEQLQDIDREADDVLVRMMDDRTAEISRSLFGHNGPVYSLSFSPDRNLLLSSSEDSTV
RLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFATSSHDKTARLWATDSHQPLRIFAGHY
SDIDVVQFHPNSNYVATGSSDMTVRLWDCVNGSQVRLMTGHKAPIYSLAFSAEGRFLASA
GADHRVLVWDLAHGHLVAALSSHSGTIHCLSFSRDGNILVSGSLDCTIKLWDFTKLAEEM
SLEDVNVSHNPDVKTNTESYLLRTFATKNTPVLALHFSRRNLLLSVGMFEST
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggataatgataaaagtactatgctggcagttctacagctacttagaaaatataatttg
aagggaacagaggaattatttaaaaaagaagcaaatctgatagacatttctccagatgaa
gctcaacaaactgattctgaagtgaacagtgttctttctgcctacaaaagtgaaggagac
cctgctctatatgagaaggcatatagcgaactaaaaaaatttgtagaaggatctttagat
atatataaacatgaattaggtacaattctatatccagttttggttcatatgtaccttgaa
ttggtttacaataatcattccgaagaagcaaagcaattattggaaagatttggtagaaat
ttagaggaatactatcaaaatgacttgaaaagattgtccaatgtcacaaaacgtgaacaa
atggctggaaatgaattaactgacactttcaaatctaatcagttcataatcagaatgtcg
agggatacactctctatattaaaaagacatttgcaagagaagaagcactgtgtgttgtta
aatattatacaagagcatctttattttgatatgtacgaaggagtagctaggaataaacag
caaattgatgccacatcaggtgcaatggttggtgaagcaacaagacaagacaataaggcg
aaagtattttatggacttttgaaggagccagacattcaatgtatgcctccaaccgaagaa
gaagaggatgatacaggtggtgtagacggggataaaccaaaaaagaagaaagctaaaaag
gatccattattttctaagaaaactaaatcggatccaaatgcacctcctgttggtagaatg
cctttgcccaacttgaaggacgcggataagttggaaaaaggaaaagcattgagagaagca
tcgaaacgcgtcgtacttggtcctgatactctgccatctatatgcttttacacgctattg
aatacagtacatagtgtgacagcagctgaagtagcagaagattcgagtttgctagccatc
ggatttggtgactcttgtataaaggtctggagtctggttccacaaaaattaagactgatg
aagacaggggaacaattacaggacatagatagagaagcagacgacgtactagtaaggatg
atggacgaccgtacagcagaaatatcgaggtcgttattcgggcacaatggtcctgtatat
agtctatcatttagtccagatagaaatctccttctttcatcatcagaagacagtacagtg
aggctgtggtctttgcatacatggacgtgtgtagtatgctacaaaggacacttattccca
gtatggtgtgtaagattttcgcctcatggttattatttcgcaacttcctctcacgacaaa
accgccagactctgggcaactgattctcatcaaccacttcgaatatttgctggtcactac
tcagatatagatgttgtacagttccatccaaattcaaactacgtagcaactggttcaagt
gacatgacagtaagattatgggactgcgtaaacggcagccaagtcaggttaatgacagga
cacaaagctcccatttactcccttgctttttctgcagaagggcgatttctggcttcagcc
ggtgctgatcaccgtgttttagtttgggatttagcacatggtcatcttgtcgctgcctta
tcgagtcattctggtactattcattgcttatcattcagtagagatgggaatatactagtc
tcagggtcgttagattgtacgatcaagttgtgggattttacgaaactcgccgaagaaatg
agtttggaggatgtgaatgtttcacataatccggatgtaaaaacgaatacggaatcatat
ctccttcgaacgttcgcgacaaaaaacacccctgtgctagcgctacatttctcgcgaaga
aatttactcttaagcgtcggaatgttcgagtcaacttag
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