Bombus affinis (rusty patched bumble bee): 126917121
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Entry
126917121 CDS
T09368
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
baff04812
]
126917121
Cytoskeleton proteins [BR:
baff04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
126917121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR41
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
eIF2A
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IP5PC_F
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Beta-prop_LRRK2
Beta-prop_ACSF4
WDR54
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
126917121
NCBI-ProteinID:
XP_050579597
LinkDB
All DBs
Position
6:2111376..2125912
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AA seq
873 aa
AA seq
DB search
MASSTKRSWKLQDFVAHSSNVNCLALGHKSGRVLVTGGDDKKVNLWAVGKQNCIMSLSGH
TTPIECVRFGQTEDLVCAGSQTGALKIWDLEHAKLARTLTGHKAGIRCMDFHPYGELLAS
GSLDTAIKLWDIRRKGCIFTYKGHNRMVNSLKFSPDGQWIASAGEEGMVKLWDLRAGRQL
REFSEHRGPATTVEFHPHEFLLASGSADRTVHFWDLESFQLVSSTDQSHSSAIRCLYFSQ
GGECLFAGCHDVLKVYGWEPGRTLDSVPTGWGKVQDIAIAQNQLIGASFHTANIVLYVCD
LKKIAPLGGVSTSGSPFSHGNSLRKSFSRERPPGLKKHTLDVRTIEEADKSGTDPEDEAT
YADIPNVTEYHDIFQPNRSLSRTPPPEPEAFPEPQDVDPTQPQILQNLSTSMSNLNTVDT
EEVPPISSPSSPPPPAPTLSLTKPVPVRVQPIKSSPPVQRNAITSTSQIKANLQANNGLG
RTSKNLASIPPLRQNITPLPGKKSGPTNDIGTLPQPLGPQRSNSTLTPRVAPMAAVLPVM
DDGKLKNRAPSPDSPKHYLKRQSSCRDGEQGYESDYPVQINNIRHSPSDPALNRPNSAQS
RSTSLNRNFATSTSLSARNASTTTTFVIKKANKAQVPPNPKLEVRASQIRPNIENTEKGE
FVPISADKPYGLDVETFLPNHFATSTGLGFSQMGVLNEMSEAEVLNSMMRGHESMMAVLT
SRHRSLQIIYSLWHNKDLKAAVESAVAMNDLSVIVDLLGILTLKPTMWNLDLCNSLLGPI
GDLLQSKYEMYITVGCSGLRLILRNFASVIKSNVEAPLHTIGVDVSREERYHKCLSCYEK
LSTIRGVLLKKQTTPGKLGALFREMVVLIRSLE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtccacgaagaggtcatggaaactccaggattttgttgcccattcgtccaat
gtcaattgcctggcactaggtcataaatctggacgcgttttggtcactgggggtgatgat
aaaaaagtgaatctatgggcagttggaaagcagaattgtattatgagcctgagtggtcat
accactccaatagaatgcgtaagatttggacagacagaagatttagtatgtgctggctcg
caaacgggagcattaaaaatttgggacctagaacatgctaaattggcccgtacattaact
gggcacaaagcaggcatacgttgtatggactttcatccttatggagaattattagcatca
ggaagtttagacactgctattaaactttgggatatccgaaggaaaggttgtatcttcact
tataaaggacacaataggatggtaaatagtttaaaatttagtcctgatggtcagtggatt
gctagtgcaggagaagaaggaatggttaagttatgggatttaagggctggtagacagtta
agagagttttctgaacacagaggtccagcaacaacagtggaatttcatcctcatgaattc
ttactagccagtggaagtgcagacagaacagttcacttttgggatttggaatcttttcaa
cttgtatcttctacagaccaaagtcattcctctgcaatcagatgtctctacttcagtcag
ggtggagaatgtctttttgctggttgccatgatgtattaaaagtttatggttgggaacca
ggtagaacattagattcagtcccaactggctggggaaaggtacaggatatagccatcgct
caaaatcaactgattggtgcaagttttcacactgcaaacattgttttgtacgtgtgtgac
ttaaagaaaattgctccattagggggagtatcaacatccggttctccatttagtcatggg
aattcgttaaggaaaagtttttctagggaaaggccacctggattaaaaaaacacacatta
gacgtacggaccatagaagaagcagacaagtctggaactgatcctgaagatgaagcaaca
tatgcagatattcctaatgtcactgaatatcatgacatatttcaacctaacaggtcattg
tctcgcactccacctccagaacctgaggctttcccggagcctcaagatgtagatcctaca
cagccacagatactacaaaatctttctacctcaatgtcaaatttaaatacggtggataca
gaagaagttccacctatctcatcaccgtcatctccgcctccacccgcaccaacgttatcg
ttgacaaaacctgtaccagttcgtgttcaaccgatcaaatcgtcgccgccagttcaaaga
aatgcaattacgagtactagccaaataaaagcaaaccttcaagcaaataacggtcttggt
agaacatcaaaaaatctcgcgtctataccacctctaagacaaaacattacacctcttccc
gggaaaaaaagcggtcctaccaatgatataggaacacttccacaacctttgggcccgcaa
aggtcaaactctacgctgacgccacgtgtagcaccaatggctgctgttcttccagtaatg
gatgatggaaaactaaagaacagagcacctagcccggattctcctaagcattacttgaaa
agacagagtagctgcagagatggagaacagggttatgaaagcgattacccggtacaaatt
aataatataaggcacagcccctccgaccctgcgttaaacaggccaaattctgcgcaatct
aggtctacttcgctgaacagaaactttgctacctcaacgtcgctgtctgcgcgcaacgct
tccacaaccacgacattcgttataaagaaagcaaataaagctcaagtgcccccgaatcct
aagttagaagtccgtgcgtctcaaataaggcccaacatcgagaacacggaaaaaggcgaa
tttgtgcccataagcgccgataaaccttacggcttggacgttgaaacttttctaccaaat
cattttgcaacttcaactggtttgggtttctcgcaaatgggagttcttaatgaaatgtca
gaagccgaagtactcaacagcatgatgcgcggtcatgaatcgatgatggcagtactcaca
agtcgtcatcgttctttacaaattatttactctttgtggcacaataaagatcttaaggct
gcggtggaatctgctgtggcaatgaacgatctttcagttattgtggatctattggggata
ctgacattaaaaccgactatgtggaacttggatctctgtaactctctacttggtccaatt
ggtgatctactacaaagtaaatatgaaatgtacataacagtgggatgttcggggttgaga
ttaattctacgaaatttcgcatcggtgatcaagtcgaacgtagaagctccacttcacacg
atcggcgtggacgtttcgcgagaagaacgataccacaagtgcctctcctgttacgagaag
ctctcgacgatcagaggtgttctattgaagaaacagacgacaccaggtaaattgggtgcc
ttgttccgcgagatggtcgtattaatacgaagtctcgagtga
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