KEGG   Bombus affinis (rusty patched bumble bee): 126917265
Entry
126917265         CDS       T09368                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
baff  Bombus affinis (rusty patched bumble bee)
Pathway
baff03030  DNA replication
baff03410  Base excision repair
baff03420  Nucleotide excision repair
baff03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:baff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126917265
   03410 Base excision repair
    126917265
   03420 Nucleotide excision repair
    126917265
   03430 Mismatch repair
    126917265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:baff03032]
    126917265
   03036 Chromosome and associated proteins [BR:baff03036]
    126917265
   03400 DNA repair and recombination proteins [BR:baff03400]
    126917265
DNA replication proteins [BR:baff03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126917265
  DNA Replication Termination Factors
   ELG1-RFC complex
    126917265
Chromosome and associated proteins [BR:baff03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126917265
DNA repair and recombination proteins [BR:baff03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126917265
  Check point factors
   HRAD17(Rad24)-RFC complex
    126917265
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 AAA_24 AAA_22 Mg_chelatase Rad17 AAA_11 AAA_30 bpMoxR MCM AAA_assoc_2 DUF815 AAA_14 ResIII AAA_5 AAA_19 RuvB_N SLFN-g3_helicase DNAX_ATPase_lid AAA_7 AAA_28 ATPase_2 AAA_2
Other DBs
NCBI-GeneID: 126917265
NCBI-ProteinID: XP_050579946
LinkDB
Position
6:1181165..1183138
AA seq 357 aa
MQAFLKTGKLGPGEPKKASTSRSKEEHSGSATPWVEKYRPRTVEDVVEQAEVVEVLRQCL
TGGDFPNLLFYGPPGTGKTSTILAAARQLFGSLYKERLLELNASDERGIQVVRDKIKSFA
QLTAGGMRDDGKGCPPFKIIILDEADSMTNAAQAALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEDKIVERLEYICKEEDLKATKPVLLKIVEASGGDLRRAITCLQS
ITRLKGKGTDITVDDIIEIIGIVPDKWLDDLMNVCKTKDYSKAEEFIDQFMLEAYATSQV
IEQLSERIIYSNELTDKQKTLIADRLGECNYRLLDGGSEYIQLINLCCGIIKAYELV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcatttctaaaaacaggcaaattagggcctggtgagcctaaaaaggcttcaact
tcacgttcgaaggaagaacacagtggttctgcaacgccatgggttgagaaataccgacca
agaactgtagaagacgttgttgaacaggcagaggtagtagaggtattgcgacaatgttta
acaggtggagattttccaaatctattattttatggcccacctggtactggtaaaacaagt
actatactagccgcggccagacaattgtttggtagcctctacaaagaaagactattggaa
ttaaatgcttctgatgaaagaggtatccaagttgtaagagataaaatcaaatctttcgca
caacttacagcaggtggtatgagagatgatgggaaaggttgtccacctttcaaaattatt
atcttagacgaggcagatagtatgactaatgctgcacaagctgcgcttcgtcgtactatg
gaaaaagaatctcatagtacccggttttgtttaatttgtaactatgtatcgagaatcata
gaacctttgacttctcgttgtacaaaattcagatttaaaccattgggagaagataaaatt
gttgagagattagaatatatatgtaaagaggaggacttgaaggcaacgaagcctgtccta
ctaaaaattgtcgaagcctcaggtggagatttacgacgcgccataacgtgtttgcagtcc
attacaaggttgaaaggcaaaggcaccgatattactgttgatgatatcattgaaattatt
gggattgtacctgataaatggttggatgatttaatgaatgtatgcaagacaaaagattat
agcaaggcagaggaatttattgatcaatttatgttagaagcatatgctacatctcaagtt
attgagcagctcagtgaaagaattatatattccaatgaattaacagataagcagaaaact
ctcattgcagatagactgggggaatgtaattataggttgctagatggtggaagtgaatat
atacaacttataaatctttgttgcggtattataaaagcttatgaattagtataa

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