Bombus affinis (rusty patched bumble bee): 126917305
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Entry
126917305 CDS
T09368
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126917305
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
baff01009
]
126917305
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126917305
03029 Mitochondrial biogenesis [BR:
baff03029
]
126917305
Protein phosphatases and associated proteins [BR:
baff01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126917305
Membrane trafficking [BR:
baff04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126917305
Mitochondrial biogenesis [BR:
baff03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126917305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
Phage_tail_terminator_2
Exu_RNase_H_like
Motif
Other DBs
NCBI-GeneID:
126917305
NCBI-ProteinID:
XP_050579993
LinkDB
All DBs
Position
6:complement(5825753..5884786)
Genome browser
AA seq
1438 aa
AA seq
DB search
MRTLGASLGTNQLQTLLEARSTFAVYATTVTLAKLRLEHLPVVVCASCRLPAFLNLYVDQ
LKEAIERECGVISAHQVLLMSGGESLEPNARVCSYSAGTDTNPIYLFNKAAIESNHPPTP
SIDYGSDVDLQNQIDASLAMPATYQTLVARAQLAQQCCGLAREQTRICEKLVHDQHLQQQ
GWAAVVANLEDITQMFQSRADVLQQSFAVYLSARQQHLELLQNFNTDLGTLEQIPILPAL
RSQAEGLSSPDDQPNQSEKDSDGREEVLSLFSWISAKDNQSSLEQVAEQCSRGLEQFDER
AMETLKSDVNAAIDNANMQDMKDIKGLGERLFALEQLMAQAKKLVQEQGELAQGFLQNQS
RANNLGDASVLPDLCTSHRRQLLVMLKNHNKLRDIRRRCIKAKEELSVNIYHRLKWIMYV
ENKMMEVDGKLVMYHESMKRLRRHLEVLQQIHLAPHMYMNAVAEVVRRRTFSQAFLVWAS
NLACQLLTVHSEELARRREFQSKFDGHFLNTLFPGLEDTPPPFATQAPSVFDNGLPKLTA
EDMESLRSQLPELALTISLPDLNSITQFFLSKSLTEASTDGNKEKDSTSMRVDVATKEQE
RTRAPMLFDRGGFESETDTEEFEKIGQGATDSKPESYDGAKQMRQKQLEVGASRSVSPAS
STSTNVSPLNSKVADLTNRSSSSSEPGSFHFPSLSVSERPAQLSPLTECAENGESSSCLL
HCATANGLPKYHETPSTTMAEEPNSLSPNPPSSLSRSVMCDGQQQQCQQLSGSGGSSPSI
GVCATDFMGTEFYMDESLPSSLSEHPIDGQHQAIVSLLQENLGNTREEVERLSSILKTMK
AVVYEALRTVHQELAVLRDRTNEEQAGFSKMTEQVREALSLYSRECDRRLREREQELTVD
HELEMADVKKLMQNREEEICTLKRDLVEKETELAEHERLISTMRQKLENEQTEMRNLQTH
LHQQLEETLEQARADKEAAVKKANDERFIEIASLTNSVTQSQKRIQELEESLKHARSEQQ
RMVKETTEKLQMEYKNELQSIRSRFKLMTASTMESSPSDSSLEKIERPDFIELTSHVLAQ
STKDMKPENSATIRSIEDERMVKLVHDLRLATQAIEEKDRTMEMYRRREIALTEECKRYK
STIRRLKDSESFKNVLIEAGLHKEHSEEQLEMSQSSLEEETKSLETEKDEVEVSESKKVR
LEASNDPSCLSRRLEILENENKRMNAELQMLRESKETAETKVETLEADKVRLEIELVKER
SRSFTATDTLPSSGSREKDMNDSVAVFSDSSSSQDATTSPKPQRSCGCITCFTHIKKKID
TTAAKLAELGHITVTSCDPGDNVLVFWDETHRTYTFYQESTTLHFLDPKSTAALDLVWNP
DESLKNTQSIVEVASKEYCHAIKIDNRYRVPRGTKFYRVKAVKPVGDSAAMLASVQEE
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacgcttggtgcatcccttggaacgaatcagcttcaaacgcttctcgaggctcgg
tctacttttgcggtctacgctacgactgtgactcttgcgaaacttcgtttggaacatttg
ccagtcgttgtttgcgcctcgtgtcggctaccagcttttctgaatctctatgtcgaccag
ctgaaggaagcgatcgagagagaatgcggcgtgatctctgcgcaccaggtgctcctgatg
agtggaggcgaaagcctggaaccaaacgcgcgtgtgtgttcctactcggccggaaccgac
acgaatccgatctatttgttcaacaaggccgctattgagagcaaccatccacctacgcca
agcatagactacggttccgatgtcgatcttcagaaccaaatcgatgcgtcgttggcgatg
ccggccacttatcagaccctcgttgctcgtgcccaattggctcagcaatgctgtggattg
gcgcgggagcaaaccaggatctgcgagaagctggtgcacgatcaacaccttcagcaacag
gggtgggctgccgtggtcgcgaatctcgaggacatcacgcagatgttccagtcacgggct
gatgttttacaacagagtttcgccgtctatctgtcggcgagacaacaacacttggaacta
cttcaaaacttcaacactgacttgggcacactggagcagattccgatcctaccagcgtta
agatctcaggccgaaggtctatcgagtccggacgatcagccaaatcaatcggagaaggat
tctgatggcagggaggaggttctcagcttgtttagttggatctcggcgaaagacaatcaa
agtagtctggagcaagtggcggaacagtgttcgaggggtttggaacagttcgacgagaga
gcgatggagacgttgaagtctgatgtgaacgcggccattgacaacgcgaacatgcaggat
atgaaggacatcaagggtcttggcgaaagactgtttgcgttagaacaactgatggcgcaa
gccaagaaactggtccaagagcagggagaacttgctcagggttttcttcaaaatcagagc
cgagcgaacaacttgggggatgccagtgtacttcctgatctctgcacttcgcacaggcgc
caactgcttgtgatgctgaaaaatcacaataaattgcgcgacattaggcgtaggtgcatc
aaagcgaaggaagaactgtcggtgaacatctatcatcggctcaagtggatcatgtacgtg
gagaataagatgatggaggtggatggcaagctggtaatgtaccatgaaagcatgaaacgt
ttgagaaggcatctcgaggtgcttcagcaaatccatctagcgccacatatgtacatgaac
gctgtggccgaagtagttcgaagacgaaccttctcgcaagctttccttgtttgggctagt
aacctggcgtgccagttattgactgttcatagcgaggaactggctcgtagaagagaattc
caaagcaaattcgatggccacttcttgaatactctattccctggccttgaggatacgccg
ccacctttcgccacacaagctccgtctgtttttgataacggactgcccaagttgacagca
gaggatatggaatctcttagatcgcagctacccgaactggcgctcactatctcgttgcca
gatctgaacagcatcacgcagttcttcctgtcgaagagtctcaccgaggcaagcaccgat
ggcaacaaagaaaaagatagcacctccatgcgcgtcgatgtagctaccaaggaacaggaa
cgaacgagagctccgatgttgttcgacaggggtggattcgaatcggagacagacacggag
gagttcgagaagatcgggcagggtgccacggactctaagccggagtcgtacgatggcgcg
aaacaaatgcgtcagaagcaattggaggttggtgcctcgcgaagcgtgtcccccgcttcc
tcgacctcaactaacgtatccccgcttaattcgaaagtcgcggacctgacgaaccggtca
tcttcctcaagcgagcctggatccttccattttcccagtctgtccgtcagcgagcgtcca
gctcagctgagtccgttaaccgagtgtgccgagaacggcgaatcgagcagctgtctgctt
cattgcgctactgcgaacggtcttcctaaatatcacgaaacgccatcgacaacgatggcc
gaggagccgaactccctcagtccaaatcctccttcttccttgtcacggtccgtgatgtgc
gacggtcagcagcagcaatgccagcagctatccggtagtggtggtagcagcccctccatt
ggagtatgcgctactgacttcatgggtactgaattttacatggacgaatctctgccgagc
agtctcagcgagcatcccatcgacggccagcatcaggctatcgtttcccttctccaggag
aatcttgggaacacgcgcgaggaagtggaaaggcttagttcaatcttgaagacgatgaag
gccgtagtgtacgaggcattgaggactgtccaccaggagctggctgttctgagggatcga
accaacgaggagcaagctggtttctcgaagatgaccgaacaggttcgcgaggctttatcg
ttgtattcgcgcgagtgtgatcgtcgtcttcgcgaacgtgagcaagagctcaccgtagac
cacgagctcgagatggcagacgtgaagaagctaatgcagaatcgggaggaagagatatgc
acgttaaaacgagatctcgtggaaaaagaaaccgagttggctgaacacgagcgtctaata
tcaaccatgcgtcagaaactggagaacgaacaaacggaaatgagaaatctgcaaacgcat
ctgcatcaacagctcgaagaaaccttggagcaggctcgcgctgacaaagaggcggccgtt
aagaaggcgaacgatgaaaggtttatagaaatagcatccttgacgaattcggtaacgcaa
agccagaaacgaatccaagagctggaggaaagtttgaaacacgcgcgcagcgaacagcaa
aggatggtgaaagaaacaaccgaaaagttgcaaatggaatataagaacgaactacaatcc
atcagaagccgtttcaagctgatgactgcgtcaaccatggaaagcagtccgagtgatagc
agccttgagaagatcgagagaccagatttcatcgagctaactagtcacgtgttagctcaa
tcgacgaaagacatgaagccagaaaattctgcgacgatacgaagtattgaggatgagcgg
atggtgaagctggttcacgatctacgattggccacgcaagcgatagaggagaaagataga
acaatggagatgtataggagacgagaaattgcattaacggaggagtgcaaacgttacaag
agcacgattaggcgtttgaaagattcggagagcttcaagaacgttctcatcgaggctggc
ttacataaagaacatagcgaggaacaactggaaatgagccagagtagtctagaggaggaa
accaagagcttggaaacggagaaagacgaggtggaagtatctgaatcgaagaaagtacga
ttggaagcgagcaacgatccaagttgtctatccagaagactcgagatcctcgaaaacgag
aacaagagaatgaacgcggaactgcagatgcttcgtgagagcaaagagacggccgagacg
aaagtcgagactttggaagcggataaggttcggctggagatcgagttggtgaaggaacga
tctagaagcttcactgccacagatacgttgccttcgtcaggaagtcgcgagaaagacatg
aacgattctgtggcggtcttttccgattcaagttcatctcaggacgcaacgaccagtccg
aaaccacaacgttcgtgtggctgcatcacgtgcttcacgcacattaaaaagaaaatagac
acaaccgccgcgaagctggcagaactaggccatatcaccgtgaccagctgcgatccaggg
gataacgtattggtgttctgggatgaaacgcacagaacgtatacgttttaccaggaatcg
acgacgcttcatttcctcgacccaaaatccaccgctgccttggatttggtctggaatcct
gacgagtcgttgaaaaatactcagagcatcgtcgaagttgcctccaaggagtactgtcat
gctataaagatcgataaccggtatcgcgtcccacgtggcaccaagttctatcgagtaaaa
gctgtgaagcctgtgggtgatagtgcagctatgttagcgagcgttcaagaagagtaa
DBGET
integrated database retrieval system
