Bombus affinis (rusty patched bumble bee): 126917367
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Entry
126917367 CDS
T09368
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126917367
03036 Chromosome and associated proteins [BR:
baff03036
]
126917367
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126917367
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
126917367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
Tex_central_region
HHH_9
Spt6_S1
S1_RRP5
Tex_N
OB_RRP5_4th
Tex_YqgF
m_DGTX_Dc1a_b_c
Motif
Other DBs
NCBI-GeneID:
126917367
NCBI-ProteinID:
XP_050580076
LinkDB
All DBs
Position
6:complement(6459574..6465890)
Genome browser
AA seq
1721 aa
AA seq
DB search
LDVKEKKKLKKLEAMQDSEDEYDDEEDDGEVPGLIDDSPIDDDNDGEDSDGSADSRKRKK
SDDEDFDDRLEDEDYDLLEENLGVKVERKRRFKRLRKIQDEESEVEEEKEIDDGRDAIAN
ELFQGSGDEDEERSEVDHRDEVERYDEEESDDEDDFIVDGDGIPITEKRRKKRPTYTDAA
LQEAQDIFGIDFDYNEFGKYEEDEFEEEEEEDDEYSHDDAEDRPRRSKKHLKRKSTRKSI
FEVYEPSELIRGHFTDVDNEIRITDIPERMQLRVVPIIPTVEDSDELDLEAEWIYKQAFC
QPTISIQDSHLNEEAKERAKKGPQTIGKIKKVLDFMRNQNFEVPFIAFYRKEYVLPELNI
NDLWKIYKFDIKWCQLKQRKENLVKLFEKMRNFQLDEIMKNPDAPLPDNIRVIKDGDIER
LKNAQTFEELNDIYRHFMLYYNQDVSSMQESAHKKKKQAQREAKLKKRQQQLGEDLPEIA
DVEDEEEEIDESLKQPIRKGPYYICRKAGLDGFIKKFGLSPEHFAENLQDNYQRHEVDQD
PIEPAIVANDFCSAIFTTSDEVLKAAQLMVAIQLAHEPLVRKCVREMYMERAKVSVKPTK
KGIKEIDEGHAIYGLKYLKNKPVRDLVGDQFLKLIVAEEDKLITLSFSDVIEGNTSNNYI
DEIKQLYYRDEFSKSVQDWNALRTGSVEVALNRIIIPQLKKELRSNLLLEAKECVMKACC
RKMYNWIKIAPYTCEFPDEDDEDWNTSKGIRVMGLAYVPDPSQAAFACIISPEGECTDYL
RLPHLLKRKNSFMESEKTLKKAQLLGIKNFIATKKPHVVVVSGESREALMIVSDIKECIA
NLAKEGQFPTIQVEICDNELTKVYANSNRSISEFRDYPELLRQAISLARKIQDPLLEFSQ
LCTIDEEILCLKYHPLQDQLSKDDLIENLYLEFINRINEVGVDLNRAVQQPYTANLVQFV
CGLGPRKAQALIKILKQTNQRLENRTQLITACHMGPKVFVNCAGFIKIDTNSLGDSTEAY
VEVLDGSRVHPETYEWARKMAVDALEYDDENANPAGALEEILESPERLKDLDLDAFAEEL
ERQCFGNKCITLYDIRAELNCRYKDLRVPYQSLNTEQLFDILTKETPETFYVGKLILATV
VGISHRRPRGDQLDQANPVRNDETGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGIR
LRLDNGISGYIHVKNLSDKHVASPEERVRVGQVIHCRIIKIEVERFSVECTSKTSDLIDK
NHEWRPQRDVYYEVEAEEKDMKTDEDAKKLQQRQTYVKRVIVHPSFHNISFAEAEKLMPT
MRQGEAIIRPSSKGADHLTVTWKVTENIYQHIDVREEGKENAFSLGRSLWIGNEEFEDLD
EIIARHINPMAAYASELLDFKYYKTSVEGIKDKAEEILKEQKKQNPGGIPYIVSATKNYP
GKFLLSYLPRTRCRHEYVTVIADGFRFRDQMFNRINDLFRWFKEHFRDPMPGQATPGTPH
GTMTSRTPYNGTPGVNGVNADTIQRVAQNMPHDMLHSLSKVANQTQHHYPPYTPGAASVN
NYGMYGSTPYTPSGQTPFMTPYHTPHHTPHHPQTPSHSQGPFLQPIPPAMNSNSHRTARS
HRSVTSTSNATNWTKAAEAWARSKQSSNSFSNYSNTTPRYDESRKTPRNQEDQNGRATPR
NRTPSARTPSYKSPRETPFTNSSPRSMSLSGDGTPLYDESW
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
cttgatgttaaagaaaagaagaaacttaaaaaattagaagcaatgcaggacagtgaggat
gaatatgacgacgaagaagatgatggagaagttcccggacttattgatgatagtcctatc
gatgatgacaatgatggtgaagatagcgatggatctgctgattctagaaaacgtaaaaaa
agtgatgatgaagattttgatgatcgtttagaagatgaagattatgacctacttgaagaa
aatttaggagttaaagttgaaaggaaacgtcgttttaagcgtttacgtaaaatacaagat
gaagagtcagaagtggaagaagaaaaagagatagacgatggaagagatgctattgccaat
gaattgtttcaaggttctggagacgaggatgaagaaagaagtgaagttgaccacagagat
gaagtggaaaggtatgatgaggaagaaagtgatgacgaagatgattttattgtggatggt
gatggaatacccataaccgaaaagagaagaaagaaaagacctacatatacggatgctgca
ttgcaagaagcccaagatatttttggcattgattttgattataacgaatttgggaaatat
gaagaggatgagtttgaagaggaagaagaggaagatgatgaatatagtcatgatgatgca
gaagaccgcccaaggcgatcaaaaaaacatcttaagagaaagagcacaaggaaaagtatt
tttgaagtatatgaacctagtgaacttatacgtggacacttcaccgatgtggacaatgag
attcgtattacagacattcctgaacgtatgcaacttcgcgttgttcccattatacctaca
gtggaagattcggatgaattagatcttgaagctgaatggatatataaacaggcattctgt
caaccaacaatttcaatacaagattctcatctaaatgaagaagccaaagaaagagctaaa
aagggtccgcaaacaatcggcaaaattaagaaagttttagattttatgcgtaatcagaac
tttgaagttccgtttattgcattttatagaaaagaatacgtgttgccagagttaaacatc
aatgatttgtggaaaatttataagtttgacataaaatggtgccaacttaaacaaagaaaa
gaaaatttagtgaaactctttgagaagatgaggaattttcaattagatgagattatgaaa
aatccagatgctccattacctgacaacatacgagttattaaagacggtgatattgaacga
cttaaaaatgctcaaacttttgaagaattaaatgatatttatcgacattttatgttgtat
tataatcaggatgtgtcatccatgcaagaaagtgcacataagaagaaaaaacaagcacaa
agggaagctaaattgaagaaaagacagcaacaacttggagaagatctacctgaaattgct
gatgtagaagatgaagaagaagaaatagacgaatcattaaagcagccgattagaaaaggt
ccttactatatttgcagaaaagctggcctagacggatttattaaaaaatttggtctctca
cccgaacattttgctgaaaatcttcaagacaattatcagcgtcatgaagtagatcaagat
ccaatagaacctgcaatagtagcaaatgatttttgttctgcaatatttacaacaagtgac
gaagtacttaaagctgcacaattaatggttgcgattcagttggcgcacgaaccattagtt
cgtaaatgcgttagagaaatgtatatggagagagcaaaagtatccgtaaaaccaactaaa
aaaggaataaaggagatagatgaagggcatgccatctatggattaaaatatcttaaaaat
aaacctgtacgggatcttgttggtgatcaattcttaaaactaattgtagcagaagaagat
aaattaattacactttcctttagtgacgtgatagaaggaaatactagcaataattatatc
gatgaaataaagcaactatattatagggacgaatttagtaaaagtgtccaagattggaat
gcattaagaactggcagtgttgaagtagctttaaatcggattattatacctcaattgaaa
aaagaattgagatccaatcttttattagaagcaaaagaatgtgttatgaaagcgtgttgc
cgcaaaatgtacaattggataaaaattgctccatatacttgtgaatttcccgatgaagat
gacgaagattggaatactagcaaaggaattcgtgtgatgggtttggcatatgtgcctgat
ccgtctcaagccgcctttgcttgcataatttctccagaaggagaatgtactgattaccta
agattaccgcatttattgaaacgtaaaaatagttttatggaaagtgaaaagacattgaaa
aaggcacagttgcttggaattaaaaattttattgccacaaagaaaccacatgttgtggta
gtaagtggtgaatctagagaagcattaatgattgtatctgatataaaagaatgtatagct
aatcttgcaaaagaaggacaatttcctacaatccaagtggaaatatgtgataatgaactt
actaaagtttatgcaaatagtaatagaagtatatctgagttcagagattatccagaattg
ttaagacaagctatatctttagcaagaaaaatacaagatcctctattagaattctctcag
ttgtgtaccatagatgaagaaattctgtgccttaaatatcatcctttgcaagatcaactt
tctaaagatgatcttatagaaaatttatatttggaatttataaatcgtataaatgaagta
ggagtagatttaaatagagcagttcagcagccttatacagcaaacctagtacaatttgta
tgtggcttgggacctagaaaagcacaggctctgattaagattttgaaacaaactaatcag
agattagaaaatagaacacagcttataacagcatgtcatatgggacctaaagtgtttgtc
aattgtgctggttttattaaaattgatacaaatagtttaggagatagcacagaggcatat
gtggaagtactagatggctcgcgtgtacatccagagacatatgaatgggcaagaaaaatg
gcagtagatgctttagagtatgatgatgaaaatgcaaatcctgctggtgccctagaagaa
attcttgaatcaccagaaagattaaaagatttagatttagatgcatttgcagaagagctt
gaaagacagtgttttggaaacaagtgcattactctttacgatataagagctgaactgaat
tgtagatacaaagatctccgtgtaccttaccaatctctaaatactgaacaattatttgat
attttgactaaagaaactccggaaactttctatgtcggtaaattaattttggcaacagtt
gttggtataagccatagaagacctcgaggagatcaattagatcaagcgaatcctgttcga
aatgatgaaaccggattatggcaatgcccattctgcttgaaaaacgattttccagaattg
tccgaggtatggaatcattttgatgccggtgcatgtccggggaaagcaactggaattcgt
ttaaggttggataatggaatatctggatacattcacgtaaaaaatctgtctgataaacat
gtcgctagtccagaggaaagagtacgtgtcggacaagtaattcattgtcgtataattaag
atcgaagtagaacgatttagtgtcgaatgtactagcaagacgagtgatcttattgataaa
aatcacgaatggagacctcagcgagacgtttattatgaagtagaggcagaagaaaaagat
atgaaaacagatgaggatgctaagaaattacaacaacgacaaacttatgtaaaacgtgtt
atagttcatcctagtttccataatataagttttgcagaagctgaaaagttaatgccaact
atgaggcaaggggaagcaataatacgacctagcagtaagggagccgatcatttgaccgta
acatggaaagttacagaaaatatttatcaacatattgatgtaagggaagaaggcaaagaa
aatgcattctctttgggtcgcagtttatggattggcaatgaagaatttgaagatttggat
gaaattatcgctagacatattaatccgatggctgcttatgcttcggaacttttagatttt
aaatattacaaaacaagcgtagaaggcattaaagataaagcagaagaaattttgaaggaa
cagaagaagcaaaatcctggaggaataccatatattgtatctgcaactaagaattatcct
ggaaaatttttactttcgtatttaccacgaactcgttgccgtcatgaatatgttactgta
atagccgatggatttcgatttagagatcaaatgtttaatagaataaatgacttgttccgc
tggttcaaagaacactttagagatcctatgccaggacaagctacacctggtactccacat
ggaactatgacttccagaacaccatacaatggtactccaggagtgaatggagtgaatgca
gatacaatacagagggtagcacagaatatgccacacgacatgttacattcactctcgaaa
gtagcaaatcaaactcaacatcattatccaccatacactccaggagctgctagtgttaat
aattatggaatgtatggaagtacgccttatacgccttccggccaaactccgtttatgacc
ccctatcatacaccacaccacacgcctcatcatccacaaacacccagccactctcaagga
ccattcttacaaccaattcctccagcaatgaattcaaattcacatagaactgcaagatca
catagatctgtcactagtacatctaatgcaacgaattggacaaaagcggcggaagcatgg
gctcgatcaaagcaatcttctaattcattttctaattatagtaatactactccaagatat
gatgaatctagaaaaacgccacgaaatcaagaagatcaaaatgggagagcaactccgcgc
aatagaaccccatctgcacgtactccgtcttataaatctcctagagaaactccatttaca
aattctagtccccggagtatgtctctaagtggagatggtactcccctatatgatgaaagt
tggtaa
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integrated database retrieval system
