Bombus affinis (rusty patched bumble bee): 126917375
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Entry
126917375 CDS
T09368
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126917375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126917375
03036 Chromosome and associated proteins [BR:
baff03036
]
126917375
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126917375
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126917375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
126917375
NCBI-ProteinID:
XP_050580093
LinkDB
All DBs
Position
6:16045901..16056300
Genome browser
AA seq
1884 aa
AA seq
DB search
MFGQTGNTSFSSFNTPTQSSPFGQSAFGKPITTTSFGSGATPVFGSGNTSLFSSKPAGST
TGGLFGNTTTPPAFTQPSFGGFGTTNTNTNLFGSQQNASTNLFGTNTATSAFGQSNKPAG
FGFGTTSGTNLFGQPQQSTQQTTPFGQSSTTGNTNLFGTTPGFGNTNTATTSITGTVVKF
SPMITTDSMSKNGISHTISVRHCCIATMKEYESKSYEELRFEDYSVGRKGPSTGIFGAPA
QPSPFGNAGAGTSTATTGFGGMSAGFGATTQSGSSGLFGKPISTFGTPSTTTTNNFAFNS
TPSTNLFGTNTQNKPFGILSTAAAPTPLFPTSNTNQTAGTGFGGINTGQNTAFGSAFGST
QPNQSLFNQNKSAFNAPSTSSSTGFSTFGQTPMSNTGTPLFCSKSTGTIGFGVNSTFGST
APSTFGTAPGFTAGQNSGTSLFNTPFKPAGQTSGFSFGSTSTPSSGLGTNTGLMLGSGST
LFGQQKSGGLFGNSGNNAPFNASGSFGSSTFGNNTNVGTGIGTGLLGAGNTTNQVKSSGT
VPVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPANAPSKLMNGQQYKVTADNKSPK
IKAKVVTPAQLSKKSMFEGLEEEDPLSEAFQPRPNAKRLVLRPKSISNSIVPSPTESSQT
VGRNLQSSGKGEEKSSVTNTYIENTTIETVDKENHSQDNNRQLVNDRRSSLSWLKTSLPR
NAKNLDEESYEAQQSLFSSPNALSEEMINNTVTELRPYANANSSNQKCSEINTSVDTSLK
NSSLVDKSCTDIVTQNSDSSQELDDSSFSTLQTSNWKPNAAKVTLKRAGYYTIPPLDKLD
EYVRGETCIVPNFTVGREDYGNVYFPESFDIYGLNLDEIVHFRHKEVIIYPDDEKKPPSG
EGLNRKAQVTLDQVWPHDKSLHKPITDPRRLAAMDYEEKLRRVSAKHDTRFLEYRPETGS
WVFKVDHFSKYGLSDSDEEDNNVPTANDTKRLKLCATQQKCATKQEQSKVVSNKDTSKAN
DLKTANTDYSDLDTRGFLLEAIISRRSFRTDQNREKQLPISPTGENARILGTDSHKLQLM
KASFFDGSDEEINEAYDQESNRALFLSDRRNSLRCFTNTPQKLDEDQNYEAIYSPMLRSN
LAIHRTPTIAYEEPTLSKTDSKLKRSMDIVAKTSTIYEKGLPDPSITPVTIILRCISEVI
PLSQSIIHKLESRSVADIGIQMGRRFKPSWGRGLTLLTLSTKKQADDVQLNNSFEQIGSY
VCGRSPEDTTSVGIVQRIQILGGSGSGEERIKTFKESIEGHLKIQLSHRVMNPDGDCLIF
DVDTDINKASMALHAHCSLAEEFAEQFATDSFASYVANVWKLCVALWGNLPDINVATENS
EDHSVVIARREAIGEWLRNVIRKTLVLEDADINYETKILLLLSAFELEEACKIAREMGDH
CLALLMAQLCSGMPIKVLTQQQIALWQNAGVDENLSLDRLKLFALVAGEPPSKHCPINVC
EGFDWKRALAVHLWYFSSPTASIRDVLDIYEASFDTTKTNDVYTSIPKPEYKGNNFELEI
NNGKPIYDLCFHLLKLFCTGNHTLGELLNPATHTADPMDYRLSWLMQQVLLALGYSHLSE
HVAILTHVNFATQLEAYDLWHWAIFVMLHLKDATKRKTAVMNLLQRHVEIDDASDCPDFI
ERETFLREELGIPSIWIHHAKAVKSYVAKRYGKAAFYFIQAEQWNKAHEIIIEYLAADVI
INENYDYLRSLLRPLTPLECSSTISGWTYQGQLLWEYMEITMNVESLLRSADPRGISSKL
ESLKQRLSSLPSKINQFPCLTAKHRLCQAEIAKRTIHLARSLLQLNENKSTSIYQLVSQL
PLPEDYAQQELRFVINMCVNEIIY
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcaaactggaaatacctcttttagtagttttaatacaccaacgcaatccagt
ccatttggacaatctgcgtttggtaaaccaattactacaacaagttttggttctggtgct
acaccagtctttggcagtggcaatacttctctctttagttcaaagcctgcaggttctacc
actggtggcttgtttggcaatactacaactccacctgcatttactcaaccatcttttgga
gggtttggtacaacaaatacaaataccaatttatttggctcccagcagaatgcaagtaca
aatctttttggtacaaacactgcaacgtcagcatttggtcagtcaaataaaccagctgga
tttggttttggtactacatctggtacgaatttatttgggcaaccccaacaatcaactcag
caaaccacaccttttgggcaaagcagtaccactggaaatacaaatttatttggtacaaca
cctggttttggcaatacgaacacggcaaccacaagtataactggtactgtcgttaaattt
tctcctatgattactactgattccatgtccaagaatggtatatctcatactatatcggtg
agacattgttgcattgcgacaatgaaagaatatgaatcaaagtcttacgaagagctacgt
ttcgaagattattctgtgggacgaaaaggacccagtacaggaatctttggtgcaccagca
caaccttcacctttcggtaatgcaggggcaggtactagtactgcaacaacgggctttggt
ggaatgagcgctggttttggagcgaccacacagtctggctcaagtggtctatttggaaag
cctataagtacttttggtacaccctcgacaacaacaacaaataattttgcttttaattct
actccaagcactaacctgtttggtactaatacccagaataaaccatttggtattttatct
acagcagcagctccaaccccactttttccaaccagcaatactaaccaaactgctggtaca
ggtttcggtggcattaatacgggtcaaaacactgctttcggctccgcatttggatcaacg
caaccgaatcagagtctatttaaccaaaacaaatcagcttttaatgcaccttccacatcg
tctagcactggattttccacttttggtcaaacaccaatgagcaatacgggtacaccttta
ttctgttctaaatcaactggaacgataggtttcggagtaaattcgactttcggttcgact
gcaccatcgacttttggaactgcaccaggtttcactgcaggtcaaaattccggcacttcg
ttgtttaatacaccttttaagcctgcaggacaaacatctggattttcttttggttcaact
tctacaccatcgtccggactcggtacaaatacgggtttaatgttgggtagtggctctact
ttatttggtcagcaaaaatcaggcggtttgttcgggaacagtggcaataatgcaccattt
aatgcatcgggctcgtttggatcttcaactttcggtaataatacaaatgtaggaacgggt
attgggactggattactcggagctggaaatactacgaaccaagtcaaaagttccggaact
gtgccggtgcatcaacaaattttagccttggtgtcagcacctttcggcgattcaccgtta
ttaaaaaatcttttaccagcttccggtaaaacagaagagttattaaaaccggcaaacgcg
ccatctaaattaatgaatggtcaacagtataaggttactgctgataataagtctccgaaa
atcaaggccaaagttgttactcctgcacaattatctaagaaatcaatgttcgaaggtctt
gaagaagaagatccactctcggaagcatttcagcctcgtccaaatgcaaagcgtttggta
ctacgtccgaaatccatatcgaactcaatagttccatcgcctactgaaagttcacaaaca
gtagggagaaacttacaatcttccggaaaaggagaagagaaatcatctgtaacaaataca
tatattgaaaatacaactatcgaaactgtagataaagaaaatcatagtcaagataataat
cgacaattagtaaacgatcgaagatcatctttgtcttggttgaaaacgagccttccacga
aatgcaaaaaatttagacgaagaatcgtacgaggctcaacagtcgctattttctagtccg
aacgcattgtccgaagaaatgataaacaatactgttactgaattgcgaccttatgctaac
gccaattcatcaaatcaaaagtgctctgaaattaatacatctgtggatacgtctttaaag
aattcatctctcgttgataaatcatgtacggacattgtgactcaaaactctgattcgagt
caagaattggacgatagttccttttcgacgttacaaacttcgaactggaaaccaaatgca
gctaaagtaacgctgaaacgcgctggttactatacaattccgccgcttgataaattagac
gagtatgttcgcggtgaaacgtgtattgtaccaaacttcactgttgggcgtgaagattat
gggaatgtgtatttccctgaatcgtttgatatatatggcttgaatttagacgaaatcgta
cattttcgtcataaggaagtcatcatttatccagacgatgagaagaaaccacctagcgga
gaaggattaaatcgtaaagcacaagttactttagaccaagtatggccacacgataaatct
ctacataagcctattaccgatcctcgtcgtttagctgcgatggattacgaagaaaaatta
cgaagagtgtcagcgaaacatgatactagattcttagagtatcgacctgaaacaggttca
tgggtttttaaggtagatcatttttccaaatatggcctaagcgattcagatgaagaagat
aataatgtccctacagcgaatgacacgaaaagattaaaattgtgtgcaactcagcaaaaa
tgtgcaaccaaacaggagcaatcaaaagtagtttcaaataaagatacttccaaggccaat
gatttaaaaacagcgaatacagactattcagatttagatacacgtggatttctcttggaa
gcaattatctcacgccgatcgtttagaacagatcagaatcgtgaaaaacaactaccgata
agtccaactggtgagaatgctcgcattttgggtacagacagtcataaactgcaattaatg
aaggccagcttctttgatggcagcgacgaagagattaacgaggcttatgatcaagaatcg
aatcgcgcgttatttctttccgatcgtagaaattctttgcgatgtttcaccaatacgcca
caaaaattagacgaagatcaaaactacgaagcaatttatagtccgatgttacgatctaat
ttggcaattcatcggacgccaactattgcttatgaagaaccgaccctttcgaagacagat
tccaaattgaaacgctcgatggacatcgttgctaagacatcaacgatatatgaaaaaggt
ttgccggatccttcgataactccggtgactataattcttcgatgtatttctgaagtaatt
ccgttatcacaatctattatacataaactagaatctcgttctgttgctgatattggcata
caaatgggaagaaggtttaaaccaagctggggacgtggtttaacattacttacattgagt
acgaagaaacaggctgacgatgtacaattaaataattcttttgaacaaattggatcttac
gtatgtggtcgttctccagaagatacaacatccgttgggatagtccaacgtatacaaatt
ttgggtggtagtggatccggcgaagaacgcattaagacattcaaagaaagtatagaaggt
catctaaaaattcagctgtcacatcgtgtaatgaatccagatggagactgtctaattttt
gacgtagatacagatattaataaggcgagcatggctttacacgcacattgtagtttagcc
gaagaatttgcagaacagtttgccacagattcctttgcttcctatgttgctaacgtttgg
aaactctgtgtagctctgtggggaaatttacctgatataaacgttgccacggaaaattca
gaagaccatagcgtcgtaattgcgcggcgagaggcaatcggggaatggttaagaaacgtt
atacgaaaaactctcgtgttggaggatgcggatattaattatgaaacaaagatattactt
ttactatctgctttcgaattagaagaggcatgtaaaattgcaagagaaatgggtgatcat
tgtttggccttattgatggcgcaactgtgcagtggaatgccaataaaggtattaacacag
cagcaaattgcattatggcaaaatgccggtgtcgatgagaacctctcgttagatcgactc
aagctttttgcgctggtggcgggtgaaccacctagtaaacattgcccaatcaatgtctgt
gaaggttttgactggaagagagcgttagctgttcatttgtggtatttttcatctccgact
gcctctataagagacgtattggacatttacgaggcctcctttgatacaaccaagacaaat
gacgtttatacgtcgataccgaaacccgaatacaaaggaaacaatttcgaacttgaaata
aataatgggaaaccaatatatgatctctgttttcatcttttaaagttattttgcactggc
aatcatacgttgggtgaattattgaatccagcaacacatactgctgatccaatggattac
agactcagttggctgatgcagcaagtacttttagctttgggttattcacatctttcggaa
catgttgccattttgacacatgttaattttgcgacacaattagaagcgtatgatctctgg
cattgggctatattcgtaatgttacatttaaaagatgccacaaaaaggaagactgcggta
atgaatttattgcaacgacatgtcgaaatagacgatgctagtgattgtcctgattttatc
gagcgagaaacgtttttacgagaagaattgggtataccttcgatttggattcaccatgcg
aaagccgtgaaaagttacgtagctaaaagatacgggaaagcagctttctactttattcaa
gcagaacagtggaataaagcacatgaaattattattgaatatttagcagcagatgttata
ataaacgaaaattacgattacctgcgcagcttattgcgtccactgactcctctagaatgc
agtagcactataagtggttggacatatcaaggacaattactctgggaatatatggaaata
actatgaatgttgaatctttgttacgtagtgccgatccacgtggaataagttctaaattg
gaatcactaaaacaacgattgtcaagtcttccttccaagatcaatcaatttccatgttta
actgcgaaacataggctttgtcaagcggaaattgcaaagagaacgatacatttagctagg
agtttgttacaactgaacgagaataaatctacgtcgatatatcaactggtatctcaatta
ccattgccggaagattatgcacaacaagagcttcgttttgtcattaatatgtgcgtgaat
gaaattatatattag
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integrated database retrieval system
