Bombus affinis (rusty patched bumble bee): 126917379
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Entry
126917379 CDS
T09368
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126917379
03036 Chromosome and associated proteins [BR:
baff03036
]
126917379
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126917379
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
126917379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
HTH_10
S1_RRP5
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
126917379
NCBI-ProteinID:
XP_050580105
LinkDB
All DBs
Position
6:complement(15773009..15780019)
Genome browser
AA seq
1773 aa
AA seq
DB search
MADFLHSEAEESEEEKELDDNEKKKLKKIKAMEESDEEEEEDDEDRLREELKDLIDDNPI
EESEGDDSDASGVSQKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEADDDRDAIANELFEGSGDEREIAMEDERRSERSHRPEVDTFDEEGSEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEEE
EEEEEDEYMDDEDAERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIP
ERMQLRTVPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIG
KIKKALDFMRNQQFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLF
NKMRNYQLDEIMKNPDAPLPDNVRLIKDDDIERLKNVQTSEELNDVYHHFMLYYSHEIPA
MQEAARQKEKEARKEAKIQKRKQQIADAEENGEDPLPEEEPDVEEEEEADETLKQAVRTG
PYSICRRAGLDNLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLTIANEYCSQILNSPE
EVLKAAQLMVAIQLAREPLVRKCVREMYMERAKISVKPTKKGIKEIDENHSVYGMKYLKD
KPVRDLVGDQFLNLVIAEEDKLITITLSDSIEGNTSNNYVDEMKQLYYRDEFSKNVQDWN
ALRVGSVEMALTRIVLPSLKKELKANLIAEAKECVMRACGRKMYNWIKVAPYTCEFPEEE
DEEWDTSKGLRVMGLAYVPEYSQAAFTCLIAPDGECTDYLRLPHIMKRKNSYREDEKAMK
EADLLAIRNFIATKKPHVVVIGGESREAMMIAADIKECIANLVEEEQFPNIKIEICDNKL
AKIYSNSNKGVSEFRDYPELLRQAISLGRRMQDPLVEFSQLCTADEEILCLKYHNLQDQL
PKDELLDNLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQ
RLENRTQLVTSCHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKM
AVDALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELN
CRYKDLRVPYQSLSAERLFDILTNETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVR
NDETGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRH
VTNPEERVSIGQIIHCRIIKIEVERFSVECTSKSSDLTDKNHEWRPQRDPFYDTEAEQRD
AKVEEDAKKAKLWQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTV
TWKVTDEIYQHIDVREEEKENVFSLGQSLWIGEEEFEDLDEIIARHVNPMAAYASELLDF
KYYKPAVEGIKDKAEEILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTV
SPEGFRFRGQMFGRVSDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGAVSGMN
QEAIQRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTANAAGYGGVHTYPNTPYTPSGQT
PFMTPYQTPHHTPHHHGQPTPRYGQQTPNHQQGPFIHPPPPSGITSTGHHRSTPSHRPTP
PMSTPGDPMDWKKAAEAWARLKSGPRVSTSTPRYEESRRTPRNYEESVGRTTPRNRTSNR
TPSYKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttttacattcggaagcagaagaaagcgaggaggagaaggaattggacgat
aatgaaaaaaagaaactgaagaaaataaaagctatggaagaaagtgatgaagaagaggag
gaagatgatgaggatcgtttacgggaggaacttaaggatctcattgacgacaaccctata
gaagaaagcgagggagacgatagtgatgcttctggagtatctcaaaaacgtaaaaaaagt
gatgatgaggactttgacgatcgcttagaagatgaagattatgacttgatagaagaaaat
ttaggagtcaaagttgaaaggaaacgtttcaaacgcctccgaaggatacaagatgaggaa
tcagaggaggaacaggaaaaggaggcagacgatgatagagatgctattgcaaacgaactt
tttgaaggttctggcgatgaaagggaaattgcaatggaagatgaaaggcggagcgaacgt
agtcacagacctgaagtcgacacatttgacgaggaaggaagtgaaggagaatacaccgac
gctgatgattttattgttgacgatgacggtagaccaattgccgagaaacgcaaaaagaaa
aagccaattttttctgatgcagctttgcaagaagcacaggacatttttggtgttgatttt
gattatgatgaatttggtaaatacggcgaagaggactatgaggaggaagaagaggaagaa
gaggaagaagaagaagatgaatacatggacgatgaagacgccgagagaccgcgaagaccg
aaaaaacagttgaaaaagaaaactacgagaaaaagtattttcgaaatttacgaaccaagc
gaacttaaacgcggtcattttaccgatatggataatgaaatacggaacacagatataccg
gagagaatgcaactccgtactgttcctgttacgccagttgcagagggttctgatgaacta
gacttagaggcggagtggatttataaacaggcgttctgtcgaccaactatttcaattcaa
gatgcacacctaaacgctgaggctaaagaaagagctcggaaagggcctcaaacgatcggt
aaaattaaaaaagctttagactttatgcgaaatcaacaattcgaagtacctttcatatcg
ttttatagaaaggaatatgtcctaccggaactaaacattaacgatctctggaaagtgtac
aaatttgacgccaagtggtgtcaacttcgtcagagaaaagaaaatttattaaaattattt
aataaaatgcgaaattatcagttagatgagattatgaaaaatcctgatgctccattacca
gataacgtacgattgattaaagatgacgacatagaacgattgaaaaatgtgcaaaccagc
gaggaactaaatgacgtttatcaccacttcatgttatactatagtcatgagataccagca
atgcaggaagctgctcgtcagaaggagaaagaagcacggaaagaagcaaagattcaaaaa
cgaaaacaacaaattgcggatgctgaggaaaacggagaagatcctctgccggaagaggag
ccggacgtagaggaagaagaggaagcagatgaaacattgaaacaggctgttcggactggt
ccatattctatttgcaggcgggccggcctcgataacctcgcaaaaaagttcggtctcact
cccgaacattttgccgaaaatttacgagacaattatcagcgacacgaagtagatcaggag
ccaacggaacctttaaccattgctaatgaatattgtagtcaaatacttaatagtccggaa
gaagtactaaaagctgctcaattaatggtagctattcaattagcgcgtgaacctttggta
aggaagtgtgtccgagaaatgtacatggaaagagcaaagatatctgtgaaacctacaaaa
aaaggaatcaaagagatcgatgaaaaccattcagtttatgggatgaagtatttgaaggat
aaaccagtgcgagatctggttggagatcagttcctaaatttggttatagccgaagaagat
aaattaattacgataacattgagtgatagcatcgaagggaatactagtaacaactacgtt
gacgaaatgaaacaactttattatcgagacgagtttagtaaaaatgtccaggattggaac
gcattgagagttgggagtgttgaaatggcacttacacgtattgtcttaccgagtctaaag
aaagagctaaaagcaaatcttattgcagaagctaaagaatgcgtaatgagagcatgtggt
cgtaaaatgtacaattggattaaagttgctccttatacctgtgaatttccagaggaagaa
gatgaggaatgggataccagtaaaggacttcgggtaatgggtttagcttatgtcccagaa
tactctcaagccgcgttcacttgtttaatcgcaccagatggggaatgtacagattatttg
agattgccacacataatgaaacgaaagaatagttaccgagaggacgagaaagccatgaaa
gaagccgacttgttagcaattcgaaattttatagcaacaaaaaaaccacatgttgtagtt
ataggtggtgaatcgagagaggcaatgatgatcgcagctgatattaaagaatgtatagcg
aacctagtagaagaagaacaattcccaaacattaagatagaaatttgtgacaataaattg
gctaaaatttactcgaacagtaataaaggtgtatccgaatttcgagattatccggaatta
ttgcgacaggctatctcattgggtagaagaatgcaggatcccttggtggaattttctcaa
ttatgcaccgctgacgaagaaattttatgtttaaagtatcacaacttgcaagatcaattg
ccgaaagacgaacttttggataatttatatttagaattcgtgaatcgtgtaaacgaagtt
ggcgttgatgtgaataaggcggtgcaacaagcttattgcgggaatttagttcaatttgtg
tgtggtttggggccgagaaaaggacaggcattgatcaaaatgttgaaacaaaccaatcaa
aggttggaaaatagaactcagcttgtaacttcttgtcacatgggacctaaggtttttatt
aactgtgcgggttttattaagatagatacaaacagtttaggagacagcaccgaagcatat
gtcgaagttcttgatgggtctcgagtacatcccgaaacgtatgaatgggcgagaaaaatg
gcagtcgacgctttagaatacgacgacgaagatgctaatccagccggagcactagaagag
attctcgaatctcctgaaagactaaaagatcttgatttggatgcgttcgcggaagaactt
gaaagacaaggtttcggcaataaatgtgtcactttatacgatatcagagcagaattaaat
tgcagatataaagatttacgtgtaccataccagtcactaagcgcagaaaggttgttcgat
attctaacgaatgaaactccggaaacattttacgtggggaaattagttttggccacagta
ataggaataagccacagaaaaccgcaaggtgatcagttggatcaagccaatcccgtaaga
aacgacgaaactggattgtggcaatgtccattctgtttgaaaaatgattttccggaatta
tccgaagtatggaatcattttgacgccggagcttgccccggcaaagctactggcgtgaga
ttaagattagataatggaatatctggttatattcatataaaaaatttatctgacagacac
gttacgaatcctgaagagagagtaagcataggacaaataatacattgtcggataataaag
attgaagtggagcgattcagcgtcgaatgtacaagtaaaagtagcgaccttacggataaa
aatcacgaatggagaccacaacgagatccgttttatgatacagaagcagaacaaagagat
gcgaaagtcgaagaagatgccaagaaagcgaaactatggcagacatatgtgaaacgtgta
atcgtgcatccttcttttcacaacatcagttttgcagaagctgaaaagttaatgcagact
atgaagcaaggggaagcaatagttcgaccgagcagtaaaggtgctgatcatttaactgtc
acatggaaagttactgatgagatttatcagcatatcgatgttagagaggaggaaaaagaa
aatgtcttttctctcggtcaaagcttatggattggagaagaagaattcgaggatttggat
gaaattattgcgagacatgttaatcctatggctgcatatgcttcggaattattggacttt
aaatattataaaccagctgtagaaggcattaaggataaagcggaagagatattaaaagaa
caaaagaaggaaaatcctggaggaattccgtatataatatctgctgcaaagaattatcct
ggaaagtttttgctatcttatcttccgcgaactcgatgtcgtcacgaatatgtaacagta
tcaccagaaggattcaggttcagagggcaaatgtttggtagagtgagcgacttgttccga
tggttcaaagaacacttccgtgatccggtacctggacaatctactcctagtactccacgt
ggagcaatgacatctagaacaccttatcatacaacgccaggagcagtgagtggaatgaat
caagaagccatacaaagagtggcgcagaatcttccgcatcatatgttacattctttatcg
caagtggcgaatcagactcctcatcattatccaccacacacaccaggaactgcaaatgcc
gctggttatggtggagttcatacttatcctaatactccgtacacaccttcgggacaaaca
ccttttatgacgccatatcaaacaccacatcatactccacatcatcatggtcaaccaact
ccaagatatgggcaacaaacacccaatcatcagcaaggtcctttcattcatccacctcca
ccttcagggataacttcaacaggacatcacagatcaacaccatcgcatagacctacgcct
ccaatgtcaacaccaggcgatcctatggattggaaaaaagcagcggaagcgtgggcacgg
ttaaaaagtggaccacgtgtatctacctctactccaagatatgaagaatctaggagaact
ccacgaaattacgaagaatcagttggaagaacaacgccgcgaaatagaacttcgaatcgg
acaccttcttataaatctcctcggggtacaccacacactaattcaagtcctcgaagtatg
tctcttagtggagatggtactcctttatatgatgaaagttaa
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integrated database retrieval system
