Bombus affinis (rusty patched bumble bee): 126917410
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Entry
126917410 CDS
T09368
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
126917410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126917410
Membrane trafficking [BR:
baff04131
]
SNARE
Syntaxin (Qa)
Stx-PM
126917410
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
PoNi_N
Spectrin_Anc-1_2
NPIP
ETRAMP
Lzipper-MIP1
DUF6584
Spectrin_Anc-1
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
126917410
NCBI-ProteinID:
XP_050580198
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Position
6:complement(15882342..15906932)
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AA seq
293 aa
AA seq
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MTKDRLAALVAAQSDDDDVADDVSVNVGGPDDFMTEFFAEVEEIREMIDRIQTNVEDVKK
KHSAILSAPQTDEKVKMELEDLMSDIKKTANKVRAKLKVIEQNIEQEEHTNKSSADLRIR
KTQHSTLSRKFVEVMTEYNRTQTDYRERCKGRIQRQLEITGRTTTNEELEEMLEQGNPAV
FTQGIIMETQQAKQTLADIEARHADIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYH
VEHAVDYVQTATQDTKKALKYQSKARRKKIMIMICLAILAVVLTTTIGGYFGL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggatagattagcagccctcgttgcggcccagtcggacgacgatgacgtggcg
gacgatgtttccgtcaacgttggcgggccagatgattttatgaccgaatttttcgcggag
gtggaggagatccgcgaaatgatagacaggatccagacgaacgtagaggatgtgaagaaa
aaacatagtgccatcttatcggcaccacaaaccgacgaaaaggttaaaatggaattggaa
gacctgatgtccgatatcaagaaaacggccaataaagtcagagctaagttgaaggtgata
gaacaaaatatcgagcaagaagagcacacgaacaaatcttcggcggatttgaggatacgc
aagacacagcattcgacgctttcgaggaagttcgtcgaagtgatgacggagtacaatcga
acgcaaaccgattacagagaacggtgtaagggaaggatacaacgacagctggaaatcacc
ggtaggacgaccaccaacgaggaactggaggaaatgctggaacaaggaaatccggcggtg
ttcacgcaggggattatcatggaaacgcaacaagcgaaacagacgctcgccgatatcgag
gcgcgtcatgccgacatcattaaactagaaaattcgatcagggaacttcacgatatgttc
atggacatggcgatgttggtagaaagtcagggcgagatgatagatcgcatagaataccac
gtggaacacgcggtggactacgtgcagacggctacgcaggacaccaaaaaagcgctcaag
tatcaaagcaaagctcgacggaagaagatcatgatcatgatctgccttgctatactcgcc
gtcgttctgactaccaccatcggtggatattttgggctgtaa
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