Bombus affinis (rusty patched bumble bee): 126917465
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Entry
126917465 CDS
T09368
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
baff03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126917465
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126917465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126917465
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126917465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
126917465
NCBI-ProteinID:
XP_050580317
LinkDB
All DBs
Position
1:18285540..18297035
Genome browser
AA seq
1542 aa
AA seq
DB search
MAKRSNNLSGRRSSSHNTKPYDANNSFVKKVATKVTDLLPQRLWISKWFNTSQNDEDILE
DNGNPEEVESEEDIQKPPPLKRPCIRMDVSHPPGTFSIQPRTKSTINKASPSKQQYFIHD
ETNEDFSKPAMAGPSGMSHLVSSTPATQSDIRNIAPQRSELNSLVTTTNNGTTNGMDDNS
ESSESTSGCSSLIPQTNRQEAPSNVSYNSPFSKRKRFNNDKLNFTSHIQSPRSLFLDNTR
DSLSSRRPSFNASIMTNTPDRASPLASPFYSGNTTFGGANAAGLYKRGRNLFNSSNEIQL
QVPKRTSVEVKPSNTDSSGMSQTAKKILEALEHFSSPITDAKKIPLKMMNNISPTNKKRS
REEMASTTKVGLRHLTRELTVPTIPDILKLRRRQKLQDTTAAARKIVSARSEPPPPQEYH
LRTQIDEDTKYHGKIKTKTANLEQEDTVEPVNLPNIPLPISSLPNFNFMSSTNTNIGDKA
NTGKEDTFTFASPIKVTNTTKNLKSINNFTFSSPLSADKQSVDKSNNSDSPLKRVGVKSA
SSNDYVPPVTQNFIWSGSSTAPRLKEKKNNDKAIPTTSNELKSGSVMDILCSKSSTTKAE
KSDESKTQLESNKELTNNKTNTIDSDTINDDNIKKIENLQSNIQDTSIMWECSECLFKNN
NSETQCFACKITRSSFKDKKTSELSISNNVSESKTTANDNFGSQFKLSSNQWECTSCFVR
NKQTDAKCAACSALKPDTKQEAKSGNCPKCRLNDPENPTICTFCNTSKSNILKMSVQDSM
KPTDNTNISVCQNNASIDENEDMDKLNSNKDTWECPCCMVRNLISIDSCPCCNTAKPSTG
IATKNAPPLFSNGFGDKFKKPEGAWICNTCMLQNETEVTTCVACGDSKPGSKKPDNSTST
NTNSNLQFNFDMPANTSGFKFGIDKADQEKTDTTISTNGFKFGEKQQSNQTGQFTFGIQK
EDMKTSEVQKSDNNVSLTSGSGFGIPNKANNVEKTDVKQDSENVGKNSTPLFSFGIAKSE
NGTIESDKQIVNVTTSTSIAPTFTFNTPKPGIEQSDIKEEKQTPLLGSTMTEASKPNIEA
TESTTTNTNTLPSATQSSIQESKSTAAFSFVVPSSTSTITSSASTTVVSSLPPSTQSSFT
FLESKSTTQTPAVPTFGQASTSAPTSSLSNTFTFGNSKTKEEPSITKTFSTLPNASPGSS
LFSSISSGPSLFGNNDTKTVPAFGQTSTEDNKQPAFGAANTSKSSTFVVPGNKVPIFGNT
ENKPKIFGSTDPKIGVFGNTDNKPTSLFNPSLQAPTAIPTSFGAPSATSTLFGSSATSVF
GNNTASTFTTESTPNIFGSTSKLNETSTPNSNIFTFGTTPAQPIAKPATGFNFSTNTNPA
EATQKPLFTFGSHSSTQKNANLFGNTFNNPTSTNSSGFLFNAPKPEASAFAQSTATNPIF
GASQPRTQNQASSSFSSTPSNTGFNFGSTAPAVTSGGFNFGTASTSTPSAGFNFNAPGTT
PTFDPNTPPTFNFTGGNAPIAFKAIPTQTPQRKFKKAIRRMR
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacggagtaacaatttgagtggaagacggtcgtcgtcgcataatacgaagccc
tacgatgcaaacaattcttttgtaaaaaaagtagcaacaaaagtgactgatcttttacca
caaaggttgtggattagtaagtggtttaatacatctcaaaatgatgaagatatattagag
gacaatggaaatcctgaagaggttgaatcagaagaagatattcaaaaacctcctccgtta
aaacgaccatgtattcgtatggatgtttctcatcctcctggtacattttcaattcaacca
agaactaaatcaacaattaacaaagccagtccatctaagcaacaatatttcattcatgat
gaaacgaatgaagatttttctaaacctgcaatggctggaccaagcgggatgagccattta
gtatcttctacacctgcaacacaatcagatattagaaacatagcaccacagaggtcagaa
ttaaattcattagtcactactacaaataatggaactacaaatggtatggatgataattct
gaatccagtgagagcactagtggttgcagttctcttattccacaaaccaatagacaagaa
gctccatcaaatgtctcttacaactctccattctctaaaagaaaaaggtttaataatgac
aaattaaatttcaccagccatatacagtctccaagatctttatttttagataatacccga
gattccttaagtagtcgtagaccaagctttaatgcatcaatcatgacaaacacgccggat
cgtgcatctcccttggcatctcctttttacagtggaaataccacgtttggtggagcaaat
gcagctggtctttataaacgaggacgtaatttgtttaatagttcaaatgagattcaactt
caagttcctaaaagaacaagtgttgaagtaaaaccatctaatacagattcatctggtatg
agtcaaactgctaaaaaaatattggaagcattagaacatttttcatcgccaataactgat
gctaaaaaaattccattaaaaatgatgaataatatatcaccaacaaataaaaagagatcg
agggaggaaatggcatcaacaactaaagttggattacgtcatttaactcgcgaattaact
gtaccaactatacccgatatattaaaattaagacggcggcaaaaattacaagatacgaca
gctgcagctagaaaaattgtttcggcacgaagcgaaccaccgcctcctcaagaatatcat
ctcaggacgcaaattgatgaagatacaaaatatcatggaaaaattaaaaccaaaacagca
aatcttgagcaagaagatacagttgaaccagttaatttaccaaacatacctctacctata
tcttctttacctaatttcaactttatgtcatctactaatacaaatataggagacaaagct
aatacaggcaaagaagataccttcacatttgcaagtcctataaaagtaacaaataccaca
aagaacttaaaatctatcaataatttcacatttagtagcccgcttagtgctgataagcaa
tcagtcgataaatctaataattcagattctcctttaaaaagagttggtgtcaaatccgct
tcatcaaatgactatgtacctcctgtaacacaaaattttatttggtctggttcatctaca
gctcctagactaaaagaaaaaaagaacaatgataaagctattcctactacttcgaatgaa
ttaaaatcaggaagtgtcatggatattctttgctctaaatctagtacaacaaaagctgaa
aaatcagatgaatcaaagacgcagttagagtcaaacaaagaattaaccaataataaaaca
aatacaattgactcagatacaattaacgacgataatattaaaaaaattgaaaatttgcaa
tccaatatacaagatacttcaattatgtgggaatgttctgaatgtttgtttaagaataac
aattctgaaactcaatgctttgcttgtaagattaccagatccagttttaaagataaaaag
acttctgaattgtcaatatcaaacaatgtcagtgaatcaaaaactacagcaaatgataat
tttggctcgcagtttaaactttcaagtaatcagtgggaatgtacatcatgttttgtaaga
aataaacaaactgatgctaagtgtgctgcgtgtagtgcactaaaaccagatacaaagcaa
gaagcgaagtctggaaactgtcctaaatgtaggttaaatgatcctgaaaacccaactata
tgtactttttgcaatacatctaaatcaaatatattaaaaatgagtgtacaagacagtatg
aaacctacagataacacaaatatttctgtatgtcagaataatgcatcaattgatgaaaat
gaagatatggataaattaaattcaaacaaggatacatgggaatgtccttgctgtatggtt
agaaatcttatctctattgattcttgtccatgttgtaatacagctaaacctagtactggg
attgctactaaaaatgcccctcctttattttcaaacggttttggagataagtttaaaaaa
cctgaaggtgcatggatttgcaacacttgtatgctacaaaatgaaacagaagttactaca
tgtgtagcttgtggtgattcaaaaccaggctcaaagaaaccagataactctacttctact
aatactaattctaatttacaatttaattttgatatgcctgcaaatactagtggttttaaa
tttggtattgacaaagctgatcaagaaaagactgatactacaatatctacaaatggtttt
aaattcggggaaaaacaacaaagtaatcaaactggccaatttacatttggtattcaaaag
gaagatatgaaaacaagtgaagtacagaaatctgataataatgtctctttgacctcagga
agtggttttggaattccaaataaagcaaataatgttgaaaagactgatgtaaaacaagat
tcagaaaacgtgggaaaaaattcaacacctctattttcatttggtatagctaaaagtgaa
aatggaacgatagaaagtgataagcagattgtaaatgtaacaacttccacatcaattgca
cctacctttacatttaatacgcctaagcctggaattgaacaatcagacataaaagaagaa
aaacaaactcctttgctgggaagtactatgacagaagcttcaaagccaaacatagaagct
actgaatctactactactaatacaaatacattaccttcagcaactcaaagcagtatacaa
gaatctaaatcaactgctgcattttcttttgttgtaccaagtagcacaagtacaattact
agtagtgcttctacaactgtggtatcaagtcttccaccttctactcaatcttcctttaca
tttcttgaatcaaaatcaactacacaaacaccagctgtaccaacatttggacaggcatca
acatcagcgcctacttctagtttatctaatacctttacatttggaaacagtaaaacaaag
gaagaaccctcaataactaaaacttttagtacattgccaaatgcctctcctggaagttca
ttattctcaagtatttctagcggtccatcactgtttggcaataatgatacaaaaactgtc
ccagcatttggacaaacttcaactgaagataataaacaacctgcattcggtgctgcaaat
acaagtaaatcctcgacttttgtagtaccagggaataaagtaccaatatttggtaatacg
gaaaataaacctaaaatttttggttcaactgacccaaaaataggtgtatttggaaacaca
gataataaaccaacatctttattcaatccatcactccaagcaccaactgcgataccaacc
tcttttggcgcaccgtcagctacatcaacactttttggatcatctgctacatccgttttt
ggtaataatactgcttcgacgtttactactgagtcaacacctaacatatttggatctacc
tcaaagttaaatgaaactagtacaccaaattcaaacatattcacgtttggcactactcct
gctcaaccaatagcgaagccagcaactggatttaatttttctacaaatactaatcctgct
gaagcaactcagaaaccattatttacgtttggtagccattcatctacccagaaaaatgct
aatttatttgggaatacattcaataatcctacatcaactaattcttccggtttcctattt
aatgcacctaaaccggaagcatcagcatttgctcaatctacagcaacaaatccaattttt
ggtgcatcacaacctcgtacacagaatcaagcgtcgtcgtcattctcgtctactccttca
aatacaggatttaatttcggatctacagcacctgctgttacgtcaggtggttttaatttt
ggtactgcatctacttctacaccatctgcaggatttaattttaatgctcccggtactaca
ccaacatttgatcctaatactccaccaacatttaacttcactggtggtaatgcacctata
gcatttaaagcaatacctactcaaactccacagcggaagttcaagaaagccattagaaga
atgcggtag
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integrated database retrieval system
