Bombus affinis (rusty patched bumble bee): 126917518
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Entry
126917518 CDS
T09368
Name
(RefSeq) breast cancer type 2 susceptibility protein-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03440
Homologous recombination
baff03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126917518
03460 Fanconi anemia pathway
126917518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126917518
03036 Chromosome and associated proteins [BR:
baff03036
]
126917518
03400 DNA repair and recombination proteins [BR:
baff03400
]
126917518
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126917518
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
126917518
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
126917518
FA (Fanconi anemia) pathway
Downstream FA components
126917518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB1
BRCA-2_OB3
BRCA2DBD_OB2
Tower
Motif
Other DBs
NCBI-GeneID:
126917518
NCBI-ProteinID:
XP_050580396
LinkDB
All DBs
Position
1:18799132..18807018
Genome browser
AA seq
1293 aa
AA seq
DB search
MNNKSDGFSFGFATASGNSIHVSEEALSKAKVLFNNELKESNNSEQKFKAENEINTFNVQ
IPDVGFQTASGQRINVTSEALSKAKKLFNNEFKESDNLEQKFKAENEINTLNVQILDVGF
QTASGQCINVTSEALSKAKKLFNNELKESDNFEQKFKAENEINTFNAQIPDVGFQTASGQ
CINVTSEALSKAKKLFNNELKESDNFEQKFKAENEINTFNAQIPDVGFQTASGKCINVTH
EAISRAKAIFQEEISKDFETILALPKSLQKRKIKDVDDNVSLNNKAKSSQFKKLRFSNEF
QVLKSTHKNSLNNEEKGNQSTSSVSMQGTLNCDVELKLNDNIMINITETSKESDEIIDNY
VISHEIASAVALLADEKDLDFTEQQISSKEIKENDETENVPSSPVIGGQFIRKKRRSTGR
RETTNTSKNKVDKLACLCNKADEFIDNLEKLNDNYASSNQYINKKDNCLTEKQDLTDKQD
QYDSAVVNDFGDSQLMIDFINQSVTVLEKRLEAALEQDKQISMKQNIKPKPTISKLYFHR
KSNTNNRISWKEISKGEKPTLCTYEELVNRKLPPEILDLRADNATMYKFHCADFYGQNIV
QNNIDGIKLEDGACLILDENGYVGITEIKRSFLASPGVDPNLLPIGWVENHYKWIVWKLA
SMDRIKLGYIILPRVLTPARVMMELKYRYDREIDRFQRSALRKILEKDDVATKRMVLCVS
SINKCDDSDTENKNQLKISSKKLILTDGWYCIQASIDQAMMKHITSGKIKEGTKLLTYGS
ELLNCDQGCSPLEIGENVCLKLHTNSTRRARWDMKLGYTVPSGPMCTKLKTIYPNGGLIG
KIKVIVARVYPMLYHEKTSAGESIFRNARCEEKASIIYERECRSMIEAFYAKAEKYFHTG
KCKSNLNTDSIDIAAVEWNEDRDKLFKEGFRSEQELEQLKNDCHMKQEKFRQELESRLQE
SLPLPRQVTPLLKIRVIEEETNAILSVWSPSEEVIDILKEGNCISLCNVMPSAKRGNELL
LTANRNASFIQVNISDNSFRLRTYTALCEISKPTFTPAYGEFDTVGIIASIGNEPYGMKN
FQAVYLAYPHADSLSSYLSILFWHGISSYGYAEILTIGSLVACGNLEWRRATSWNIPVAY
CTERSIFTHNPRDSHLQEPLENLKCSITDISTYIDTCVVEISEKVQKKSMMRNNFNKDIS
NENINANKQLNDHVSQEFQGRSLTNNQLAKSVAIQKRLEKLRSYGEPSSLSPITLKNSSK
RVSLEFQSPIQSRSEKCTKVHTTLHARLTQNPT
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaaagtgatggtttctcatttggttttgctactgccagtggtaattcaatc
catgtgtctgaggaagctttatcaaaagcaaaagtgctctttaataatgagcttaaagaa
agtaataactctgaacaaaaattcaaagctgaaaatgaaattaatacatttaatgtgcaa
ataccagatgttggatttcaaactgcaagtggtcaacgcattaatgtgacaagtgaagca
ctatcaaaagcaaagaaactctttaataatgagtttaaagaaagtgacaacttagaacaa
aaattcaaagctgaaaatgaaattaatacacttaatgtgcaaatactagatgttggattt
caaactgcaagtggtcaatgcattaatgtgacaagtgaagcactatcaaaagcaaagaaa
ctctttaataatgagcttaaagaaagtgacaactttgaacaaaaattcaaagctgaaaat
gaaattaatacatttaatgcgcaaataccagatgttggatttcaaactgcaagtggtcaa
tgcattaatgtgacaagtgaagcactatcaaaagcaaagaaactctttaataatgagctt
aaagaaagtgacaactttgaacaaaaattcaaagctgaaaatgaaattaatacatttaat
gcgcaaataccagatgttggatttcaaactgcaagtggtaaatgcattaatgtgacccat
gaagcaatatcgagagcaaaagcaatatttcaagaagaaatctccaaagattttgaaact
attcttgcattacctaaatcattgcaaaagcgaaaaattaaagatgtagatgacaatgta
tctttgaacaacaaagcaaaatctagtcagtttaaaaagttacgatttagtaatgagttt
caagtcttaaaatctactcataaaaactcattgaataatgaagaaaaaggaaatcaaagc
acatcttcagtatctatgcaaggaactctaaattgtgatgttgaacttaaattaaatgat
aatattatgattaatattactgaaacaagcaaggaaagtgatgaaataatagataactat
gtaatttcacatgaaatagctagtgcagttgcacttttagctgatgaaaaggatttagat
ttcacggagcaacaaatatcttctaaggaaattaaagaaaatgatgaaactgaaaatgtt
ccatctagtccagtaataggaggacaatttattcgtaaaaagcgaaggagtacaggtaga
agagaaactacaaatacctcaaaaaataaagtagataagttggcatgtttatgtaataaa
gcagatgaatttatagataatttagaaaagttaaatgataattatgcaagttcgaaccaa
tatataaataaaaaagataattgtttaacagagaagcaagatttaacagataaacaggat
cagtatgactcggcagtcgttaatgattttggtgactctcaattaatgatagactttata
aatcaatctgtaactgtattagagaaacgtttagaagctgctttagaacaagataaacaa
attagtatgaagcaaaatattaagcctaaaccaacaatcagtaaattatattttcacaga
aagagtaataccaataatcgtatatcatggaaagaaattagtaagggagaaaaacctact
ctatgtacatatgaagagcttgttaacagaaaattaccacctgaaattttggatttaaga
gctgataatgcgacaatgtataagtttcattgtgcagatttttatgggcaaaatattgtg
caaaataatattgatggtataaaattggaagatggagcttgtttaattttggatgaaaat
ggttatgtaggaataacagaaattaaaagatcttttttagcaagtccaggtgtagaccct
aacttacttcccattggatgggtagaaaatcattacaaatggattgtatggaaattagca
tcaatggatagaataaaactaggttatatcattttaccaagagttctaactcctgccaga
gtaatgatggaattgaaatatcgttatgacagggaaattgatagatttcaaagatcggct
ttaagaaaaatattagagaaagatgatgttgcaaccaagagaatggttttatgtgtgtct
tctattaataaatgtgatgattctgataccgaaaacaaaaatcaattaaaaatatcatcc
aaaaaattgatattaacagatggatggtattgtattcaagcttcaattgatcaggcaatg
atgaaacatataacatctggtaaaataaaagagggaacaaaattattaacatatggatct
gaattattaaattgtgatcaaggatgctcacctttggaaattggagagaacgtatgttta
aaattacatacaaattcaacaagaagagcaagatgggatatgaagttagggtatacagta
ccatcaggaccaatgtgcactaaattaaagaccatttatccaaatggtggcttaattggg
aaaattaaagttatagttgcgagggtatatccaatgttatatcatgagaaaacttcagca
ggagaatctatttttcgaaatgctagatgtgaagaaaaagctagcattatctatgaaagg
gaatgtcggtcaatgatagaagcattttatgctaaagcagagaaatattttcatactgga
aaatgcaaaagtaacttaaatacggacagtatcgatatagcagcagttgaatggaatgaa
gatcgcgacaaattatttaaagagggatttcgttcagagcaggagctagagcaattaaag
aatgattgtcatatgaaacaggagaaatttagacaagaattagaatctcgattacaagaa
agcttacctttaccgcgacaggttacacctcttttaaaaattcgcgtaattgaggaagaa
acaaatgctattctttcagtttggtctcccagcgaagaagttatagatattttaaaagaa
ggaaattgtatatcactttgtaatgttatgccctcagcaaaaagaggtaatgagttgcta
ttgactgcaaatcgaaatgcatcatttatccaagtaaacatttctgataatagttttcgt
ctgagaacatatacagcattatgtgaaataagtaagccaaccttcacaccagcttatgga
gaatttgatacagtaggaattattgcttctattggaaacgaaccctatggtatgaaaaat
tttcaagctgtgtatttagcatatccacatgcggattccctgtcttcatatttatcaata
ctcttttggcatggaatatcttcttatgggtatgcagaaattttgactataggatctctt
gttgcctgtggcaatttagaatggcgtcgagctacatcatggaatataccagtggcatat
tgcacagaacgaagtatttttacgcataatcctcgagacagtcaccttcaggaaccttta
gaaaatttaaaatgttcgataacggatattagtacgtatatagatacctgtgtggtagaa
atttcggagaaagtacaaaagaaatcaatgatgagaaataatttcaacaaagacatatca
aatgaaaatattaatgctaacaagcaacttaatgatcatgtatctcaggaattccaagga
aggagtttaacaaataatcaactagcaaaatctgttgccatacaaaaacggcttgaaaaa
ttacgatcttatggtgagccatctagtctatccccaattacacttaaaaacagctccaag
cgagtatcattggagtttcaatctcccatacaatcgagaagtgaaaaatgtacaaaagtt
catacaacattacatgcaagacttacacaaaaccctacatga
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integrated database retrieval system
