Bombus affinis (rusty patched bumble bee): 126917563
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Entry
126917563 CDS
T09368
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126917563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126917563
Spliceosome [BR:
baff03041
]
Complex A
U1 snRNP components
U1 related factors
126917563
Complex B
126917563
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
RhoGAP-FF1
CEP164_N
HVO_2833_C
Motif
Other DBs
NCBI-GeneID:
126917563
NCBI-ProteinID:
XP_050580494
LinkDB
All DBs
Position
6
Genome browser
AA seq
837 aa
AA seq
DB search
MASNDGIPPPAAVPGFPPATPNIASTFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPPP
GFSFPITAAPPPDAGVIAAPPQITAPGIPPPAPIASEATSGVQPIATTEKKTDWTEHKAP
DGRTYYYNSATKQSLWEKPDELKTPSELLLSQCPWKEYKSENGKVYYHNVTTKESRWTIP
TELEELKARIAAEEAAAAAAAVVASATNTIVPAGIQHLSPNIAIANTSQTSTPEPGGKSA
IEQAMAATLAAINIPTPPAKPDEDSNSAKGSANDSRTSTPEPKMQFKDKKEAIEAFKELL
RERDVPSNATWEQAVKLIQSDPRYPQMKKLNERKQAFNAYKTQKLKEEREQERLRLKKAK
EDLEQFLLENDRMTSTTKYYKCEEMFGNLEVWRAVGDSDRRDIYEDVIFNLAKREKEEAK
QLKKRNTKRLAQVLDTMTDVTYRTTWQEAQALLLQHAAFAEDADLLEMDKEDALLIFENH
IRQLEKDEEEEKEHEKKRRKRQERKNRDAFISLLDELHEQGKLTSMSLWVELYPMLSADL
RFSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVC
EDRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQMT
WDDVRSKIEEEPDFKAITLESERVRIFKEYQHELEESCSHHHIRSKKKKTKKVKRKSRSR
SHSESEGSDKGLKKKRHKSRSPSVPSKSDSSESDTRKSKKKKSKKKRGRSHSRSHSRLPS
SEESPERKRKEEKHRRPSAHSEGSVTENAEHHELSEDELEKQRAQLLRELQMQQEDN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatgatggtatacctccacccgctgcggtaccagggtttccaccagcgact
ccaaatattgcttccacttttgtaccacctattatgcctactgcaccttttatacctcct
cctagtttaccacctggtccacccggtataatgcctccacagttttctatacctccacca
ggttttagttttccaattactgctgctcctccacctgatgctggagtcatagctgcacct
cctcaaataacggcaccaggtattcctccacctgcacctatagcaagtgaagccacatca
ggtgttcaacctattgcaacaacagaaaaaaagactgattggactgaacataaagctcct
gatggaaggacatattattataatagtgctacaaaacaatctttgtgggagaaaccagat
gagctaaaaacacctagtgaattgcttttatcacaatgcccttggaaagaatataaatca
gagaatggaaaagtatattatcataatgtgacaactaaggaatctaggtggaccattcct
acagagttagaagaattaaaagcaagaattgcagctgaagaggctgcagctgcagctgca
gcagttgttgcgagtgctacaaatactatagttcctgcaggtattcaacatttatctcca
aatattgcaattgcgaatacatctcaaaccagtacaccagaaccaggtggaaaatctgca
attgaacaagccatggctgcaactcttgcagcaataaacattcctactccacctgcaaag
ccagatgaagatagcaattctgcaaaaggatcagcaaatgatagtcgtaccagtactcct
gaaccaaaaatgcaatttaaagataagaaggaagcaattgaagcatttaaagaattatta
agagaaagagatgttccatcaaatgctacatgggaacaggcagtaaaattaattcaaagt
gatcctagatatccacaaatgaaaaaattaaatgaacgtaaacaagcattcaatgcatat
aagacacagaaacttaaagaggaacgtgagcaagaaagattaagattaaaaaaagctaag
gaagatttggaacaatttttattagaaaatgatagaatgacaagtacaacaaagtattat
aaatgtgaagaaatgtttggtaatttggaagtgtggagggctgttggtgattcagatcgc
cgggatatttatgaggatgttatttttaatttagctaagcgtgaaaaagaagaagcaaaa
cagttaaaaaagagaaatactaaaagattagctcaagttttagatactatgactgatgtt
acatatagaactacttggcaagaagcacaagcattacttttacaacacgcagcttttgca
gaagatgcagacttattagaaatggataaagaggatgcattacttatttttgaaaatcat
atacgtcaactagaaaaggatgaagaagaagagaaagaacatgagaaaaaacgtagaaaa
agacaagaacgaaaaaacagagatgcttttataagtttgttggatgagcttcatgaacaa
ggaaaattaacatccatgtcattgtgggtagaactttacccgatgttatctgctgattta
agattttcagctatgcttggacaatctggatcaactccactagatttgtttaaattttac
gtcgaagatttgaaatctagatttcatgacgaaaagaaaattatcagagaaattctgaaa
gataaaaattttgaagtgcaagttaatactacttttgaagagtttgctacagtcgtatgt
gaggatcgaaaatctgcaacattagatgcgggtaatgtaaaattaacgtacaatttatta
cttgaaaaagctgaagcccgagagaaagaacgtgtaaaggaagaaactagaaagtttaag
aaattagaaactggctttaaaaatttactaaaaactcttaatgttgattatcaaatgacg
tgggacgatgtaagaagtaagattgaagaagaaccagatttcaaagcaataacattagaa
agcgagagagttagaattttcaaggaatatcaacacgaacttgaagaaagctgtagtcat
catcacattagaagtaaaaagaagaaaacaaaaaaggtgaaacgcaagtcacgatcgcga
tcacatagtgagtctgaaggtagcgataaaggtttgaagaaaaaaagacataaatcaaga
tcaccaagtgttcctagcaaatcggatagttccgagtctgatactagaaaatcaaaaaag
aagaagagtaaaaagaagagaggtcgtagtcattcgcgatcacattcgagacttccgtct
tctgaagaatcaccagaaagaaaacgaaaggaagaaaaacatagaagaccttctgctcat
agtgaagggtctgttactgaaaatgctgagcatcatgaactttcagaggatgagttggaa
aaacaaagggcacaactattacgtgaattacaaatgcagcaagaagacaattaa
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