Bombus affinis (rusty patched bumble bee): 126917653
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Entry
126917653 CDS
T09368
Name
(RefSeq) nuclear pore complex protein DDB_G0274915-like isoform X1
KO
K18716
nucleoporin NUP42
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126917653
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126917653
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
126917653
NCBI-ProteinID:
XP_050580732
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Position
6:2787426..2790046
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AA seq
626 aa
AA seq
DB search
MVVCKYYRQGNCRFGQYCQFEHINTFGGNNKVDSYNEDEYIAVLVAKEMLNAERGRQWLL
SCFAPFKDKPCIPGMEDLSPEEVRWEMYQAQNNGMVDQAKLHFQQLCTDMKAKREAFKNP
TRETLTKLKEILGTGHKNARNDNTSGKSSSFTFATPQLGLPSSTPSSNVFGNKTFGTQSN
PFSGGFPPTSNTSIFGRTPTTSNSVFGSTPTFGSNLGVFGGGTSTNTVFGGITNTSTFNA
GQNTQTFGSSGSIFGGGASQPVFGQPSIFGTGNPVNNVFARHETSQAPISVFNSGATSSP
SLFSGTSSQSNASVFAGAKTSTANLFGGSSNLQTTNSIFGSTPSTGTFSSGIFSQSETPA
FGGAPVFGASATFGNNPSSIFGEKPAFGNSGSIFGGSNTTTPAFNSTQPTNAFGVTTSTS
SVNLFGNAQGTTPSMPTSSTSPFSATPSTTTSPFATATSQFETTSTAVFSKPTFGMATET
AGGTFATTATSSSTPFGTTNTGVTFGTPSTTTSPFTSTIFSDITSSPFSSTSVTSTATTT
NSFTPQQQQITSPFGTFAQNQTSSTATSTHEPFGKSTFGVTLAATIIDDNIYSLDNQLTD
DEKNMYMAEKFIFGKIPLKPPTKDIR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttgtaaatactatcgacaaggaaattgtcgatttggacaatattgtcaattc
gaacatataaatacttttggaggtaataacaaagttgactcttacaatgaggatgaatat
attgcggtgttggttgcaaaagaaatgctcaatgcagaaagaggaagacaatggttacta
tcatgttttgcaccatttaaggacaaaccgtgtattcctggcatggaagatttgtctccg
gaagaagttcgatgggagatgtaccaagctcaaaataatgggatggtagatcaggcaaaa
ttacatttccaacaactgtgtacagatatgaaggcaaaaagagaagctttcaagaatcct
acccgtgaaacactaactaagcttaaagagattttaggtacaggacacaagaatgccagg
aatgataatacatctgggaaatcctctagttttacttttgcaactcctcaacttggactt
ccaagcagtactccatcctccaatgtatttggaaacaagacatttggaactcagagcaat
ccattcagcggtggtttcccgcccaccagcaatacatcaatctttgggagaacacctaca
acttcaaattctgtatttggtagtacaccaacttttggcagtaatttaggagtgtttggt
ggtggtaccagcactaatactgtatttggtgggattacaaacacttctacatttaatgca
ggacaaaacacgcagacttttgggtcgtccggctcgatttttggcggtggagcttcccaa
cccgttttcgggcagcctagcatatttggaaccggcaatccagtgaacaatgttttcgcc
aggcatgaaacgtcccaggcgcccatatcagtattcaatagcggagcaacatcttctccc
tctttattcagtggcacttcttctcaatctaatgcttctgtatttgccggagctaaaact
tctactgctaatctgtttggcggctcttcaaatttgcagacgactaactccattttcgga
tcaactccatccaccggaaccttcagttcaggcatattctcgcagtctgaaacacctgca
tttgggggagcaccagtatttggtgcttcagcaacctttggaaacaatcccagttcgata
tttggcgagaaaccggcatttggaaattctggtagtattttcggcggatccaataccacg
acacctgccttcaattcgacacagcctacaaacgcttttggcgttaccacttctacatct
tccgtaaatctatttggaaatgctcagggtaccacaccctctatgcccacttccagtact
tcgccatttagcgcaacaccttcaacgactacgagtcctttcgctaccgcaacctcgcaa
tttgaaaccaccagtacggcagtcttctcgaagcctacgtttgggatggctacggaaact
gcgggtggcacttttgctactacagctacttcctctagcacaccgtttggtactacaaat
accggagttacttttggtacacctagtaccaccacttctcctttcacatcgacgatattt
agcgatataacgagctcaccatttagttctacgagcgttacgtctacagctacaaccaca
aattcgtttacaccgcagcaacaacaaattacttccccatttggtacttttgcacaaaat
caaacttctagtactgctacgtctacgcacgaaccgtttggaaaatcgacattcggagta
acgctggcggcaaccattattgacgacaacatttattcgttagacaatcaactaacagac
gacgagaagaacatgtacatggctgagaaatttatttttggaaagattccactgaagccg
cctaccaaagacattagataa
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