Bombus affinis (rusty patched bumble bee): 126917658
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Entry
126917658 CDS
T09368
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126917658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126917658
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126917658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
Motif
Other DBs
NCBI-GeneID:
126917658
NCBI-ProteinID:
XP_050580748
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All DBs
Position
6:complement(17244420..17247972)
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AA seq
839 aa
AA seq
DB search
MGDGIHGRCVLNMNNLAYTDLLTMNSSRVSGDTGFSELLRSAERLSAAVESNEELPQVER
NLRQILEASNELWSRVTQTGTQDNQVQAHLLLGSRGVDLPQISQKLSSLSARRTFEPLDP
IADTDIVSYLRNEKENAILSIIEQVHKDTFELTRVQQMEHMLGEWKQMRFEIINAMTAPS
GELVDLRGTPQRTKLAGSMISGLSDIEVAYVKQLQNYNDHVLRGITKPNLFNAFCEAANS
FNDKKIVDLWKMVKRMVDIRPIPREDQIKSRSTAIVEQEIVLHARKYLEDRYKEFMNSVI
NENPAQAKRGGIPGTVPLVKSFVSVKVQNLKDLEDVMVEDKPLWPLVYYCMRVGDYKAAL
QCLNQYNTKFPEFRVALEEACNDPQRRPSSSAESNLKLQYRKHVRSVTDPYKRVAYCALV
PCEPDDLHSDVICTADDYLWLKLCQVRDQSDAENKLTLDYLQTTISEIYGESYYHAHEQP
FVYFSMLFLTGQFEAAIEFLARGAGARHLPHAVHLAAAMHEHNLLGVSQSVLAPLISVDP
ADKTPAKRLNFARLILLYVKRFDSTDPKECLHYLFLLRSMKDPHDRNMFAASAAEMVVDT
SPAVRTQLIGKIVEDRWIPGILDQFQINTEDVINISADTLYRKGLLEDAVTVYDLARNHE
KVLSLMCTLLAQIVNQKTSPGSLRSRLQVTATEISRRYQNIEIQAPSELVSAFYTLKHLM
VFFDQFHNEQYQSALRTIAEAKLLPLHIKEVDERVNAIRRVPPEVAGTLADVLLATMTIL
YRQYQKLRSMEPGDEEARKQQLLDLREQARALTSFAGTLPYRMPNETNSKLVQMEILMC
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatggaatccatggacgttgtgttttaaatatgaataatcttgcatacaccgat
ttgttaaccatgaattcttctagagtatctggagacacaggctttagtgaattattgcga
tcagcagaaagattatctgctgctgtagaaagcaatgaagaacttcctcaagttgagaga
aatcttcgtcaaattttagaggcttccaacgaactctggtctcgtgtcacacagaccggc
actcaagataatcaagtacaggcgcatctcttgcttggctcacgcggtgttgatttacct
cagatttcacagaaattaagttcacttagtgcaagacgtacatttgaacctttagatcct
attgcagatacagatatagttagttaccttaggaatgagaaagaaaatgctatattgtca
atcattgaacaagtccataaagatacttttgaacttactagagttcaacaaatggaacat
atgctaggtgaatggaaacaaatgcggtttgagataataaatgccatgacagctccgtct
ggggagcttgtagatttacgtggtactccacaacgtactaaattagctggttccatgatt
agtggcttatctgatatagaagtagcttatgtgaaacagttacaaaactataatgatcat
gtgcttaggggaataactaaacctaacttgtttaatgcgttttgcgaagctgcaaactcg
tttaatgataaaaaaattgtggatctttggaaaatggttaagcgtatggtagacattcga
ccaattcccagagaagatcaaatcaaatcaagaagtacagctattgttgaacaagaaatt
gtgttacatgcaagaaagtacttagaagatagatataaggaatttatgaactctgttatt
aatgaaaaccctgctcaagctaaaaggggtggcattccaggcactgtgccattagttaaa
agttttgttagtgttaaagtacaaaatctgaaagatttagaagatgttatggttgaagat
aaaccattatggcctttagtttattattgtatgagggtcggtgattacaaagctgcatta
caatgtcttaatcaatacaacacaaaatttccagaattcagagttgccttggaagaagct
tgtaatgatccccaaagacgtcctagtagttctgcagaatcaaatttaaaattgcagtat
aggaaacatgttagatcagttactgatccatacaaaagagttgcatattgtgcattggtt
ccttgtgaacctgatgacctgcactctgatgtaatttgtacagctgatgattatttgtgg
ttgaaactgtgccaagttagagatcaatcggatgcagaaaataaattgactttggattat
ttacaaactacgatatcagaaatttatggagagtcatattatcatgctcatgaacaaccg
tttgtatatttttcaatgttatttttgactggtcaatttgaggctgcgattgaatttctg
gcaagaggagcgggagcaaggcatttaccacatgctgtacatttagcagctgctatgcat
gaacataacttgttaggagtaagccaaagtgttctagcacctttaataagtgttgaccct
gctgataagactcctgctaaaagattaaattttgccagattaatattattgtacgtcaaa
cgatttgattccacagatccaaaggaatgtttacattatctattcttattaagatctatg
aaagatccacatgatcgtaacatgtttgctgcatcagctgcagaaatggtagttgatact
tctccagcagtcagaactcagttaattggaaagatagtagaagatcgttggataccaggg
attttagatcaatttcaaattaatacagaagatgttataaacataagcgctgatacatta
tacagaaaaggtcttttagaagatgcagtaacagtgtacgatcttgctcgcaatcacgag
aaagttcttagtttaatgtgtacgctcttggcgcaaattgttaatcaaaaaacttcgccg
ggatcactcagatctcgattgcaggtgactgctacagagataagcagaaggtatcaaaac
attgaaatacaagcaccatccgaattagtatctgcattttatactttaaagcacttaatg
gtgttctttgatcaatttcataatgaacaatatcaaagtgcgcttaggactattgcagag
gcgaaattgttaccattgcatatcaaagaagtcgatgaaagagtaaacgcgatacgacgt
gtaccacctgaagtagctggtacgttagccgacgtccttttagctacaatgacaatactt
taccgtcaatatcagaaattacgatcaatggaaccaggtgatgaagaagcaaggaaacag
caacttcttgatcttcgggaacaagcgcgagctttaactagtttcgcaggaacacttcca
tatcgcatgccaaatgaaacgaatagcaaacttgtacaaatggagattcttatgtgctga
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