Bombus affinis (rusty patched bumble bee): 126917791
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Entry
126917791 CDS
T09368
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baff03400
]
126917791
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126917791
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
126917791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
UvrD-helicase
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
126917791
NCBI-ProteinID:
XP_050581023
LinkDB
All DBs
Position
6:complement(11710150..11719161)
Genome browser
AA seq
2121 aa
AA seq
DB search
MPELPRITRSLRMFTNLGRIKSTRELQPNDLFKKEEEYKKLKSEFNWQDLCRHVPKDALH
HVNKLRQIAVKTFGECPYELIDEFLLFTLQLLINDKLLTNEKFTILKRKAANLTFQDAQN
MVEIIRIIRERLKESILVLIENRETDADNIEISESKLFGSKIEYKPARVLWPDTETLRSM
SLENIIQSTDNFSMKYRNEDTNLSKTKFDKAIYKQNLESYAKYFTDMTLEEFEEFIIISK
LKNQNAEDELLDLLGCESIEFIQYIIEHRKSIIALSSDSKVQKKCNTQRPLISGQVTIQS
EKEKQLLKQVRKKEKKLNKISNKREKRGESEENSFESLELSLKKNEALIEMHTPIFEKNV
TDRNTRENIPFVFDSNISSRTTAGYVSKQQIMLPQNAVRKDTEMFEEVSIPPPESQLIDV
NYKPVMIDSLDDTGQMAFSGIKSLNIIQSIVFDAAYHTNENLLISAPTGAGKTNVAMLTI
VHQIKQHIEHGQLMKNQFKIIYVTPMKALAAEMTANFSKKLQCLGISVRELTGDIQLTKS
EIQQTQMIVTTPEKWDVVTRKGTGDISLTSIVKLLIIDEVHLLHGDRGPVVEALVARTLR
QVESSQSMIRIVGLSATLPNYLDVARFLRVNPHVGLFYFDHRFRPVPLSQTFIGVKATSP
LQEINYMDQVCYNNVIDMVSKGHQVMVFVHARNATVKVAQTLKELAMKDGTLKLFIPEGQ
AKFTNKAFAKSRNRYLIELFSSGLSVHHAGLLRTERNLVEKYFAEGLIKVLVCTSTLAWG
VNLPAHAVIIRGTEIYDAKHGSYIDLDILDVLQIFGRAGRPQFDVSGHATIITSHNKLYH
YLSLLTNQIPIESSFIKYLADNLNAEIALGTISNVEEAIKWLSYTYLFVRMKLNYHVYGI
LPQVIIDDPNLEQKRKELIDIAAKALDEAKMIRYNISTGDLSTTNLGRIASHFYLKYDTI
EIFNRLTKPIMSEAEILAMISQSQEFGQLKVREDEMNELQKLIQQYCELNVQGGVENIHG
KVNILLQTYLSHGRVNSFSLISDQAYIVQNAGRICRALFNIMLGQNRATMAGRLLEMAKV
IEVQQWSFKNPLCQFHCLSPEIINKIEENDLTIDRLNNMNVKEIGDILYNQKVAALVKKC
CEELPALEMESNLQPITRTVLRIRLKIYPQFRWNDSVHGKASEPFWIWIEDPDSDFIYHH
ECFNMTRKMVCNKLEQELVMTIPLQEPLPSQYIVRATSDRWLGCQNMLPLTFHDLILPEI
YPPHTNLLELQPLPVKALKDPLFEKLYKFSHFNPIQTQIFHCLYHTDNNVLLGAPTGSGK
TIAAEIAIFRVFKQYPTQKIVYIAPLKALVRERIKDWKVRLEEQLGRQVVELTGDVSPDI
KVIASASVIVTTPEKWDGISRSWQTRAYVKDVALIIIDEIHLLGEDRGPVLEVIISRTNF
ISSHTSKKLRVIGLSTALANAVDLANWLGIKEMGLYNFRPSVRPVPLAIHIHGFPGKNYC
PRMATMNRPTFQAIKQHAPSSPSLVFVSSRRQTRLTALDLIAYLAAEDNPKQWLHMCEEE
MNTILNHVRDSNLKLTLAFGIGLHHAGLQDRDRMIVEELFVNNKIQVLITTATLAWGVNF
PAHLVVIKGTEYYDGKQHRYVDMPITDVLQMIGRAGRPQFDTAGVAVVLVHDLKKNFYKR
FLHQPFPVESSLLAVLPDHINAEIVAGTIKNKQELLDYLTWTYFFRRLMKNPRYYDLNAL
EPNTINQYLSSLVDSTLKVLINSHCVIFDQEEQILYPQSMGKIASFYYLSHHTMLMFEES
LQEFLTLEQCLHILCNSYEYNELPVRHDEELLNEELSKMCRYQVDNYSYGSPHTKAFLLL
QAHFSRLPLPCVDYITDLKSVLDQSIRIIQAMIDTVAEHGWLASALMIMNLLQMLIQARW
IDEFAITTLPHVNSEHIQLFSALSSCLPKLCFIMRNKYSTLVEVLGKDFQEEQIFQIHQV
MKEMPMLHVELSIEMHDEEQRNQKIISLKTDNSDRINICKDQDYILNITMKRKNKSNNLK
AHCPLFQKGKDEGWFLVLGNTSNLELLALKRASGINEQRKYYQLQFTAPSNLGQTTLVFY
LISDCYIGLDQEYNIKLNIIS
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccacgaattacaagatctttgcgtatgtttacaaaccttggacgtatt
aaaagtacaagggaactacaaccaaatgatttatttaaaaaagaagaagaatataaaaaa
ttaaaaagtgagtttaactggcaagatttatgcagacatgtacccaaagatgctttacat
catgttaataaactacgtcaaattgctgtaaaaacgtttggagaatgtccttatgaactc
atagatgaatttttattgtttactctacaattactaatcaatgacaagttgttaactaat
gaaaaattcacaattttaaaaaggaaagctgcaaatttaacatttcaagatgctcagaat
atggtggagataattagaataattcgagaaagattaaaagaaagtattttagtactcata
gaaaatagagaaacagatgctgataatattgaaatatcagaaagtaagttgtttggctca
aaaattgaatataaacctgcaagagtattgtggccagatactgaaacacttcgcagtatg
tctttagaaaatattattcaaagtactgacaatttttcgatgaaatatagaaatgaagat
acaaatctgtctaaaacaaaatttgataaggcaatatataaacaaaatttggagtcatat
gcaaagtattttacagatatgactttggaagaattcgaagagtttattataattagtaaa
ttaaaaaatcaaaatgcagaagatgaattacttgatcttttaggttgtgaatctatagaa
tttatacaatacattattgaacatcgaaaaagtattatagctttgagttctgattcaaag
gtacaaaaaaagtgtaatacccaaagacctctaattagtggacaagtgactatacagtct
gagaaagaaaaacagctactgaaacaagtacgaaagaaggaaaagaaattaaataaaata
tcaaataaacgagaaaaaagaggagaatctgaagaaaatagttttgaatcattagaatta
tccttaaaaaagaatgaagcattaatagaaatgcatacacccatatttgaaaaaaacgtt
acagacagaaatacgcgagaaaatattccctttgtatttgactccaatatatccagtaga
acaacagctggttatgtatcgaaacaacaaataatgttaccacagaatgcagtaagaaaa
gatacagaaatgtttgaggaagtttctataccccctccagagtctcaactaattgatgta
aattacaaacctgttatgattgattccttagatgatactggacaaatggcttttagtggt
attaaatcattaaatataatacaaagtatagtatttgatgcggcatatcatactaatgag
aatttattaatttctgctccaacgggtgctggaaagaccaatgttgctatgttaactata
gtacatcaaataaagcaacatattgaacatggtcaattaatgaaaaatcaatttaaaata
atttatgtaaccccaatgaaagctttagcagctgaaatgacagcaaattttagtaaaaaa
cttcaatgtcttggtatatccgttcgtgaattaactggagatatacaattgactaaatca
gaaattcaacaaacgcaaatgatcgttactacgccagaaaaatgggacgttgttactaga
aaaggtactggagatatatctcttactagtattgtaaaattattaattatcgatgaagtg
catttgttacatggtgatagagggcctgtagttgaagcattagttgctcgaacattaaga
caagtagaatcatcacaaagcatgataagaattgttggactttctgcaactttaccaaat
tatctagatgttgcaagatttttaagagtgaatccacatgtaggactcttttattttgat
catcgatttcgaccagtaccccttagtcaaacatttattggtgtaaaagctacatcaccg
ttgcaggaaataaattatatggatcaagtatgttacaataatgttatagatatggtatct
aaaggacatcaagtaatggtatttgtacatgcacgaaatgctactgttaaagtggcacag
acattaaaagaattagcgatgaaagatggtacacttaaattatttatacctgaaggtcaa
gcaaaatttacaaataaagcgtttgctaaatcacgcaacaggtatctaattgaattattt
agcagcggattatcggtacatcacgctggtttattacgtacagaaagaaatttggttgaa
aagtattttgcagaaggtttaattaaggtattagtatgcacgtcaacattagcttggggt
gtaaatttacctgcacatgcagttattataagaggaacagaaatatatgatgcaaaacat
ggctcgtatatcgatttagatatattagatgttttacaaatctttggtcgtgctggtaga
ccacaatttgatgtatctggtcacgctactattattacttctcataataaattatatcac
tatttatcattattaacaaaccaaatacctattgagagtagttttattaaatatttggct
gataatttgaatgctgaaattgcattaggtacaatatctaatgtagaagaagctataaaa
tggctaagttatacttatttatttgttcgaatgaagttaaactaccatgtttatggaatt
cttcctcaagttattatagatgatccgaatctagaacaaaaaagaaaagagttaattgat
atagcagctaaagcattagatgaagctaaaatgattcgatataatataagtacaggagat
ttgagtacaacaaatctaggacgtattgcaagtcacttttatcttaaatatgatactatt
gaaatttttaacagacttacaaaaccaattatgagtgaagcagaaatacttgctatgata
tctcaatctcaagaatttggacaattgaaagtacgagaggatgaaatgaacgaattgcaa
aagttgattcaacaatattgcgaacttaacgttcaaggcggtgtagaaaatatacatggg
aaagtgaatattctattgcaaacgtacttatcacatggtcgagttaattcattttcattg
atatcggatcaagcatatattgtgcaaaatgcaggacgcatatgtcgagcattgtttaat
attatgctaggacaaaatcgtgcaacgatggctggtcgtttattagaaatggcaaaggta
attgaagtgcaacaatggagttttaaaaatcctctctgtcagtttcattgtttatctcca
gaaattattaataaaatagaagaaaacgatttgacaattgatagattaaataatatgaat
gttaaagaaattggagatattttgtataatcagaaagtagcagcattggtgaagaaatgt
tgtgaagaattacctgcattagaaatggaatcaaatttacaacctattactcgcacagtt
ttaagaatacgtttaaaaatatatcctcaatttcgatggaatgacagtgttcatggtaaa
gcttcagaaccattttggatatggatagaagatccagacagtgattttatttatcatcat
gaatgctttaatatgacaagaaagatggtttgcaataaacttgaacaagagcttgtgatg
actataccattacaagaaccattaccttctcaatatatagtaagggcaacaagtgatcgc
tggttaggttgtcaaaatatgctacctctaacatttcatgatttaattttacctgaaata
tatccaccacatactaatttgttagagttacaaccattacccgtaaaagcattaaaagat
ccactatttgaaaagctttataaattctctcattttaatccaatacaaacacaaattttt
cattgtttatatcatacagacaataatgtcctgttaggagctccaactggttcagggaaa
acaattgctgcagaaattgctatatttagagtatttaagcaatatccaacgcagaagatt
gtatacattgcaccattaaaagctttagttagagaacgaataaaggattggaaagttaga
cttgaagaacaactaggaagacaagtggtagaactaactggagatgtatcaccagatatt
aaagttatagcaagtgcgagcgttattgtaactacaccagaaaagtgggatggtattagt
agaagttggcaaacaagagcttatgtcaaggatgttgctcttattattatagacgaaatt
cacttattaggagaagatcgtggtcctgtattggaagttattatttcaagaactaatttt
atctctagtcatacctcaaaaaaattaagagttatcggactttctacagcattagctaat
gcagtggatttagctaattggcttggtatcaaagaaatggggctttacaattttcgtccg
tctgtacgacctgtaccgttagcaattcatatacacgggttcccagggaaaaattattgt
cctcgaatggcaacaatgaatagaccaacttttcaagcgattaaacagcatgcaccatct
agtccatccttagtgtttgtttcatcacgcagacaaacacgtttaactgcactagattta
attgcataccttgcggcagaagataatcctaaacaatggttacatatgtgtgaggaagaa
atgaacactattctaaatcacgtacgagactcaaacttaaaacttacacttgcatttgga
attgggcttcaccatgctggtcttcaagatagagatagaatgattgttgaagaattattt
gtgaacaataaaattcaggtgttgattacaacagctactttagcttggggtgtcaatttt
cctgctcacttggttgtaataaaaggaacagaatattatgatggtaaacaacaccgttat
gtagacatgcctattacagatgtacttcaaatgataggacgtgcaggcagaccccaattt
gatactgcaggagtggcagtggttttagtgcatgacttaaaaaaaaatttttataagagg
tttctacatcaaccattcccagtagaatcaagtttactagctgttttaccagatcatata
aatgctgaaattgtggctggtacaattaaaaacaaacaagaattattagattatttaacc
tggacgtatttttttagaagattaatgaaaaatcctagatattatgatctaaatgcttta
gaacctaacacaattaatcagtacttatcttctttggtggacagtacattaaaagtgttg
ataaattcacattgtgtgatatttgaccaggaagaacaaattttatatccacaatcaatg
ggtaaaatagcatcattttattatttatcacatcatactatgttaatgtttgaggaatcg
ttacaagaatttctaacattagaacaatgtttacatattttatgtaattcttatgaatat
aatgaactaccagtaaggcatgacgaagaattattaaatgaggaattaagcaaaatgtgt
cgttaccaagtagataattactcatatggttctccacatacaaaagcatttttattactt
caagcacatttttcaagacttcctttgccatgtgtagattatattactgatttaaaatca
gtacttgatcagtcaattaggattattcaagcaatgatagatacagttgcagaacatgga
tggttagcaagcgcacttatgataatgaatttgcttcagatgcttattcaagctcgatgg
attgatgaatttgcaattactacattaccacatgtaaattcagaacatatacaattattt
tcggcgttgtcatcatgtcttccaaaattgtgctttattatgcgcaacaaatatagtaca
cttgtagaggtgcttggtaaagactttcaagaagagcaaatatttcaaatacatcaagta
atgaaagagatgccaatgcttcatgtcgagttaagtatagaaatgcacgatgaagaacag
agaaaccagaagattatatcgctaaagactgacaattccgatcgtataaatatttgcaaa
gatcaagattatatactaaatattacaatgaaaagaaaaaataagtctaataacttgaaa
gcacactgccctttgttccaaaaaggaaaggatgaaggttggtttctggttttaggtaat
acttctaacctagaattattagctctaaaacgagcatctggaataaatgaacaacgcaaa
tattatcaattacaattcacagcaccatcaaatctaggacaaacaactctagtgttttat
ttgatatccgattgttacataggactggatcaagaatacaatataaaactaaatataata
tcttaa
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integrated database retrieval system
