Bombus affinis (rusty patched bumble bee): 126917807
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Entry
126917807 CDS
T09368
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126917807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126917807
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126917807
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126917807
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
126917807
NCBI-ProteinID:
XP_050581067
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Position
6:complement(11701007..11704536)
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AA seq
459 aa
AA seq
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MANLNFEQPPRSIANASLISRTGGGGGLNSSTLTGHVTPTSSMFSGSSASTSSSVNSAVV
VTNVYPGASGAGGGQNSHQSQQQQLSPMGTRGLFGQRAFTDRRTMPALGTSNPMASMGTF
GIPQSRNYGSQINNFHSVFGSGGGGDTSTPPLLDLSEFPSLTNRGQGDSMPQPSPMPGKQ
PYVGMVKQPTSESSEFTMSSEDFPALPGTQNREGPSPGGSVSGDKNIPVGLGPEIGQDIL
QANRAPGSEKSQLTKRGVQIFPDGKVLNLPTSMIQDQFGVVGLLTFIRAADTDPNLVSLA
LGYDLTSLGLDLTSGDSIHQNFAGPWTEIPCRPQDIDFHVPPEYLINAAIRDKLAPVKLN
RYKDDLLFYMFYTNIGDMMQLAAAAELYTREWRYHMEEKVWITQAPGLGLVEKTSTYERG
TYYYFDAQSWRKVAKEFHLEYTKLESRPILPPNFYLNQP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctaacctgaactttgagcaaccaccacgcagtattgcgaacgcaagccttatatca
cgcacaggtggtggggggggcttaaattcatcaacccttacgggtcatgtcacacctacc
tcgagcatgttctcaggctcatctgcaagcacttccagttcggttaactctgcggtagta
gttactaacgtttatcctggagcatcaggagcaggaggtggacaaaatagtcatcagtct
caacaacaacagctctctcctatgggcaccagaggactgtttgggcagagagcttttaca
gatagacgtacaatgcctgctcttggaacatcaaatccaatggctagcatgggcacattt
ggaatacctcaaagtcgaaattacggatctcaaatcaataattttcactctgtttttggc
agtggaggaggtggagatacaagtactcctccattgttggatctatctgagtttccttca
ttaacaaacagaggacagggtgattctatgccgcaacctagtcctatgccaggcaaacaa
ccttatgttgggatggtaaaacaaccaacatctgaatcaagtgagtttacaatgagttct
gaggattttccggcattgcctggaacacaaaatagagaagggccatcgccaggtggaagt
gtttctggagataaaaacatacctgttggacttggtcctgaaattggacaagatatattg
caggcaaatagagcaccaggatctgagaagtctcaattaactaaaagaggtgtacaaata
tttcctgacggcaaggtgcttaatttaccaactagtatgatacaggaccagtttggagta
gttgggttattgacatttattagggcagctgatacagatccgaatctagtatctttggca
ttaggctatgatttaacttcgttaggattagatcttacttcaggagatagtattcatcaa
aattttgccggaccttggacagaaataccatgccgacctcaggatatcgattttcacgtg
ccgccagaataccttattaatgcagccatcagggataagctagcaccagttaagctaaat
cgatacaaagatgatctactattttatatgttttatacaaatattggggatatgatgcaa
ttagcagcagcagcggagttgtacactagagagtggcgatatcatatggaagaaaaggtt
tggataacacaagcaccaggattgggacttgtagaaaaaacatcaacatatgaacgcggt
acttattattattttgatgcgcaaagttggagaaaagtagcaaaagaatttcatttggaa
tatacaaaactagaaagtagacctattcttcccccaaacttttacctaaaccagccttga
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