Bombus affinis (rusty patched bumble bee): 126917839
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Entry
126917839 CDS
T09368
Name
(RefSeq) DENN domain-containing protein Crag isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126917839
Membrane trafficking [BR:
baff04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
126917839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
126917839
NCBI-ProteinID:
XP_050581121
LinkDB
All DBs
Position
6:complement(525646..571889)
Genome browser
AA seq
1587 aa
AA seq
DB search
MPCEDQFCYLKLIIMDERRVADYFVIAGLSGQDNDFDNDNENDQLEDWYQEGTHVKDTNM
KPPITDLAIIFPALGEKCPEGYVLLEHTVSGLPADLNHGSLRTNECYLCYRRGRDKPPLV
DIGVIYDGKERIMQDAEMILETPKGHLANVNNSAARIFVTYRRATRKMPCNSLVVTDICV
ILTNKGETPPHAFCVINKNLNKGMLGSDVFLCYKKSMNRANLISFKPTILYKYPIVDYSS
FIFPNSVAMFCLPMGATIECWPKVACKPKPVFSTFVLTVADAAQKIYGSAITFYEEVELE
MDKPNFKENQQPADVLMENMKNSVEHAEIDYQQLKMKTQKQSGIFKKLTLAQLEKLQYTN
PATQSLNISKSICILSHWPFFDTFEKFLVFLHSMCNSKPQQVPIEKYIAYFLYDIPFPSP
QRPRILVQLSTKDRLILTQPEDLALPRSGASFRQLLINLGPDNCLLILLLILTEQKILVH
SLRPDVLTSVSEAIAMILFPFKWQCPYIPLCPLGLAEVLHAPLPFLIGVDSRFFDLYDPP
SDVNCVNLDTNNIAICDDKKYLSVKLLPKKAARQLRNCLEHLYSKLISLGKSYSSMKDTE
DEEFSVDKEFQQKRKEQALELEIQDAFLRFTATILKGYRAFLLPITKAPTVGSTDPTSLF
NIQAFLRSRDKAHAKFYSMLVKTQMFIRFIEERSFVSDMDMAGLAFFDECTERIEEENVP
LLELDESQHSERTVFIPPPEAGPNQSPIVYRTFKLNPDLIRPQKNFNIGNPNLSAFGIVP
GSPMARRTKHEIKVAQRMARKQAAMPDRWGRCLLGTCYSLWFLHLPAMLQVSNQPATILH
QAYDLLVKMPKLHLDPIEEVNFSILVCYRAMMQLCGVYGQPVLAVKLLFHMKRSGVQPNA
LTYGFYNKAVLEATWPSDMTNSSQLMWNKLRNAIVGAALFKRAGKRSARRRLSSNAELLS
VDGKTASMEHAFSRSSLDSSHSQDTEAAHSDSTKGSSVPDLPEYGPFEIKKLPRQNSIVK
DSVVLSVMPTEELDNMSLNQRIIRNLESPLKSPIRTPVTENDPLGALINDETPIVSPSEE
NDSNCSTSTLTVFNNTEERPGGPLLFRSNILPRSATFHQTVDETGVAIGGHLQRSETMPH
SVAQQSEQDKERERLEISSLWSQKDSVTSSLSSLGSSLKLSFGPTSLTGKKSNEIILGGL
NSLKSAATTVVKKFDEIKEAISATSTPVKIKERDCKIPHGASHESLDSMTDGSLQDRNEP
LKVSGDGTLDPYTLYDLTECLYPKGSRELDERIAIELVLSSASRCHHCASILYDEEIMAG
WQPEDSNLNTVCQYCDKATVPLLTITILDYRCEENEKKSDPLMGALVELLDKPKELLEPI
TVPYLNPLVLRKELESVLSQEGDACLTKHKFIEEHPIVYWNLIWYFERINLMSHLPDLWL
GNDKKKEQINYSAVGVKTMWDNERLHMDRLPMYLQWKLNIADDKTLMQSVITNVRRNDLA
EPIKRVALERNKNQSTNQPLFSIYRDILFLAFTVLGRGNIDQGVFDREYTLSLERLTEKE
EKLLCKIDAPPSMMSVFCRHYFKQLSV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgccatgtgaagatcagttttgttatttaaagttgataatcatggacgaaaggagggta
gcagattactttgttattgctggtctatcagggcaagacaatgattttgataatgataat
gaaaatgaccaattagaagattggtatcaagaaggaacacatgtaaaagacacaaatatg
aaacctcctattactgatcttgctattatatttccggcgctgggtgaaaaatgtccagaa
gggtatgttttgttagaacatactgtttcagggttacctgcagacttaaatcatggaagt
ttaagaacaaatgaatgttacttatgttatcgacgagggcgtgataaaccaccattagtt
gatataggtgtaatatatgatggtaaagaacgtataatgcaagatgctgaaatgatatta
gaaactccaaaaggacatttagctaatgtgaataactcagctgcaagaatatttgtgaca
tatagacgagcaactcgtaaaatgccatgcaactcattagtcgtgactgatatttgtgta
atattaacaaataaaggagaaactcccccacatgcattctgtgttatcaataaaaatttg
aacaaaggcatgttgggtagtgatgtatttctgtgttataagaagtctatgaatcgggca
aatttgatatcttttaaacctacaatactgtataaatatccaatagttgattacagcagt
tttatttttccaaattctgtggcaatgttttgtttgccaatgggagcgacaatagaatgc
tggcccaaagtagcatgtaaacctaagccagtgttctctacatttgttttgacagttgct
gatgcagctcaaaaaatatatggatcagcaataacattttatgaagaagtcgaattagaa
atggataaaccaaattttaaggaaaaccaacaaccagcggatgtactcatggagaatatg
aagaattctgttgaacacgcagaaattgactaccaacagttaaaaatgaaaacgcagaag
caatctggaatatttaaaaagctcacactagctcagttagaaaaattacagtatacaaat
cctgcaacgcaatctttgaacattagtaaatctatatgcatcttatcacattggccgttt
tttgacacatttgagaaatttttagttttcttacatagcatgtgtaatagcaaaccgcaa
caagttcctatcgagaaatatatagcatattttttgtatgatataccatttccaagtcca
cagagaccgagaattcttgtgcaattaagtactaaggacagattaattttgactcaacca
gaagatttggcgcttcctaggtctggtgccagttttcgacagttactcataaatttagga
cccgataattgtttacttatattattgttaatccttactgaacaaaaaatacttgtacat
tcgttacgtcctgatgtacttacatcggtgagcgaagcaatagctatgatactatttcca
tttaaatggcagtgcccgtacatacctttgtgccctcttggattggctgaagttctgcat
gctccactgccgtttttaataggagtggattccagattttttgatttatatgaccctcct
tctgatgttaattgtgtaaatttggacacaaataatatagcaatttgtgatgataaaaaa
tatttaagtgtaaaactattaccaaagaaagcagctagacagcttagaaattgtttagaa
catctttattcgaagttgatttctttgggcaaaagttattcatcgatgaaagacacagaa
gatgaagaatttagtgtggataaagaatttcagcagaagcgaaaagagcaggctctggag
ctcgaaatacaagacgcttttctaagatttaccgctactatactcaaaggttatcgtgct
tttttactaccaattaccaaagcgccaacagttggttctacagacccaactagtttgttc
aatatacaagcgtttcttagaagtcgggacaaggctcatgcgaaattttatagtatgtta
gtgaaaacgcaaatgtttataagatttatagaagaaaggagttttgtatctgatatggac
atggcgggtttagcattttttgacgaatgtaccgaacgcatcgaagaagaaaatgtgcct
cttttggaactggatgaatctcagcatagcgaacggacagtatttatacctccgcctgaa
gctggcccaaatcaatcgccgatagtatatcgtacatttaaactaaatcctgatttaata
agaccgcaaaaaaattttaacataggaaatccgaatttaagtgccttcggaatagtacca
ggaagtcctatggcacgtagaaccaagcatgaaattaaagtagcacaaagaatggcgcgc
aaacaagcagcgatgccagatagatggggtagatgtctacttggaacgtgttacagcctt
tggtttttgcatttaccggctatgctacaggtctcgaaccaaccggctacgatcttacat
caagcttatgatttattagtgaaaatgccgaaattacatcttgaccctatcgaagaagta
aatttttctattcttgtttgctatagagctatgatgcaactttgtggcgtttatggacag
cctgtgttagctgtaaaattattatttcatatgaaacgcagtggagttcagccaaatgca
ctcacttatggattttataacaaggctgtactcgaagcaacttggccatctgatatgaca
aactccagtcaattgatgtggaataaattaagaaacgctatagttggagctgctttgttt
aagagagctggtaaaagaagcgctagaagaagattgagttccaatgctgaattattatct
gtcgatggcaaaactgcaagtatggaacatgcattttctagatctagtcttgacagttct
cattctcaagacacagaggctgcccacagtgattctactaaagggagctccgtcccggat
ctgccagaatatggaccttttgagataaaaaagcttccccggcaaaatagtattgttaaa
gattcggtagtattaagtgttatgccaacagaggaattggataatatgtcgttgaatcaa
agaataattcgaaatttggaatcaccattgaagagtcctattcggacaccagtcacagaa
aatgacccattaggtgctttaattaacgacgaaactccgattgtctcaccttccgaagag
aatgattcaaattgttccacaagtactttaactgtttttaataacaccgaagaacgccca
ggaggacctcttttatttcgaagtaatattttgcctcgtagtgcaacatttcatcaaacg
gtagatgaaactggtgttgcgataggtggacatttacagaggagcgaaactatgccacat
tctgttgcacagcaaagtgagcaagataaggaaagagaacggttagaaataagcagtctt
tggtcacaaaaggacagcgttacttccagtctttcaagtttaggctccagtttgaagttg
agttttggtcctactagtttgacaggaaagaaatccaatgaaataatactcggtggttta
aatagtctaaaatctgctgccacaacagtggtaaaaaagtttgacgagatcaaggaagct
atctctgcgacaagtacccctgtgaaaataaaggagcgcgactgtaaaataccacatgga
gcatcacacgagtcgttggactcgatgacggatggttctttacaagacagaaacgagcct
cttaaagtatctggagacggaactctagatccttatacgttatacgatttgactgaatgt
ttatatccaaaaggatcgagagaattagacgaacggatcgctattgagcttgtactctct
agtgcgagtagatgccatcattgcgcctctatcctttacgacgaagaaataatggccggt
tggcaaccagaagattcaaatttaaatacagtttgtcagtactgtgacaaagcaacagta
cctctacttactatcacaatattagattatagatgcgaggaaaatgaaaagaagagtgac
cctctaatgggagctttggttgaattactagataaaccgaaagaattattagaacctatc
acggtgccatacttgaatcctctagttttaaggaaagaactagaaagtgttttaagtcaa
gaaggtgacgcgtgtcttactaaacataaatttatcgaggaacatccaatcgtatactgg
aatcttatatggtatttcgaaagaattaatttaatgagtcaccttcctgatctgtggtta
ggcaacgataagaaaaaggaacagataaattacagcgctgtaggtgtcaaaactatgtgg
gataatgaaaggcttcacatggatcgcttgcctatgtatcttcaatggaaactgaacatc
gcagatgacaaaacattaatgcagtcagtgatcacgaatgttcgtcggaatgatctagcg
gaacctataaaaagagtggccttagaaagaaataaaaatcaatcgactaatcaaccgcta
ttttctatatatcgagatattttgtttctggcatttacagttttggggagagggaatatt
gaccaaggtgttttcgatagagaatatacactatctttggaaagattaacagaaaaagaa
gagaagctgttatgtaaaattgatgctccgccctcgatgatgtcagtattttgcagacat
tactttaagcaactaagtgtgtaa
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integrated database retrieval system
