Bombus affinis (rusty patched bumble bee): 126917942
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Entry
126917942 CDS
T09368
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
baff03037
]
126917942
Cilium and associated proteins [BR:
baff03037
]
Primary cilia and associated proteins
USH complex and associated proteins
126917942
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
126917942
NCBI-ProteinID:
XP_050581359
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Position
6:6881324..6992695
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AA seq
965 aa
AA seq
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MASSTEDYGSELQELQWGGGSGSHFLRSGTHFLRSGTGGCYEAEDLESTSRHHGGQHRGY
YSPPGTSYTIVERPPSAPHHHSSHTTPYRHRGHTTGGSGAISPEQVLRLFGNGVSERRQG
DRRTPASSPASVAAVRSTPSSTSQQQQQSQQSQQSQPNPANPPTSPSSQPLSLQELTVRT
ITMTRDPPDSHHGFGICVKGGKDAGEIRSTFRLPPSPYFAPQDREAQSGVGVYISRVEEG
SVAERAGLRPGDTILEVNGTPFRAVTHEEALKMLKSCRTLSMTVRGPALDPRCRGGHPVW
SSSGRQQSCSWIDRQGRPTSPPPLYPPRDSRYGPRTRKVELCIEPGQSLGLMIRGGLEYG
LGIYVTGVDKDSVADRAGLLVGDQIIEVNGQNFEEATHDEAVEILKTNKRMTLLIRDVGK
VPHSCTTSQPIVMPTSRYPEHDPLLLESPGNHRPPSPTIASDWRHRGGMHTVSAATAAMV
EEKARVVLARSERAALSQLLADYRTRRMTIEELVVNLGDLLNTHEKLTLLTELRELVDSK
DRAAFDDLVYRPRVAMARRKGDRAHSDLIVTPSLHDLPRGVPSGCCRPGRLVDVEGDPLG
VTGPLLPRDNQEYRSPSEDSGLGADMPRTRVGCRRTQQHQVTTSDLALSNDDECDNQRMF
PIAVDEPDKRDVCRFLLQDYEDELENGRGRRHSSPGGSRGNPRDYGHHHLHPDNLESDGG
CDGSDAEMIGNGRRGGGTERDRDMEEDEDEGREERSSEGGGGGGFGGWRSHLLGGLTQRV
KSWYWGARPLELAHKLSRSFDMQEAQLLEEGGSGAATAGAGGAGGPPRRHHSAQRLTRSE
MSERREEDGALVVPDHQGNLRITVKKTKSILGIAIEGGANTKHPLPRIINIHDNGAAYEA
GGLEVGQLILEVDGHKVEGLHHQEVARLIAESFARRDRNEIEFLVVEAKKSNLEPKPTAL
IFLEA
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcacggaggattacgggtcggaattacaggagctgcagtggggtggtggt
agcgggtcgcacttcctgcgcagcggcactcacttcctgagaagcggcaccggtggttgc
tacgaagctgaggatttagagtccaccagcaggcatcatggtggtcaacacaggggatat
tatagccctccgggtacgagttacacgatcgtcgagagaccaccgagtgcccctcatcac
cattcctcgcacaccacaccgtataggcacaggggacacaccactggaggttctggtgcc
atttcgccggaacaggtgcttagactttttggaaatggtgtgtccgagcgtcgacagggc
gataggagaacgccggcgtcttcgccggcaagtgtcgccgctgttcgaagcacgccatcg
tcaacgtcccagcagcaacagcaatcgcagcagtcgcaacaatcgcagccgaatcccgcg
aatcctccgacatcaccgagctctcagccattgagtttacaggagctcaccgtaaggaca
atcaccatgacgagagatccaccggactctcaccatggctttgggatctgcgtgaagggt
ggcaaggacgcaggtgagatccgaagtaccttcaggctacctccatcgccgtacttcgcg
cctcaagatcgagaagcgcagtcaggggtgggtgtctacatttcgagggtggaggagggt
tcggtggccgaacgtgctggactcaggccaggagacaccatcttggaggtgaacggcaca
cccttccgggcggtgacccacgaggaggccctcaaaatgctgaaatcatgcaggaccttg
agtatgacagtgcgagggccagcgttagatccccgatgtagaggtggacatccagtgtgg
tcttcttccggtcgccagcagtcctgcagctggatcgaccgtcaaggtcgtccaacatca
ccacctccgctttatccacctcgagactcgaggtacggtccaaggacgaggaaggtcgag
ctctgcatcgaacccggtcagtcccttggtttgatgatcaggggtggccttgagtacggc
cttgggatttatgtgaccggggtcgacaaggacagcgtagctgaccgagctggactcttg
gtaggtgaccaaataatcgaagtaaatggacaaaacttcgaggaagcaacacacgacgag
gcagtggaaattctgaagacgaacaaaagaatgactctgttgattcgcgatgtcggaaaa
gtgccacattcttgcaccacgagtcaacctatcgtcatgccaacttctaggtatcccgaa
cacgaccctcttctcttagaaagtccaggaaaccatcgaccaccgagtcctaccattgcg
agtgattggaggcacagaggcggtatgcacacggtttctgccgcgacagcagcgatggtg
gaagaaaaggcgagggtggtcctcgcgagaagcgagagagctgcactttctcagctgctg
gctgattataggacgcgtcgaatgacgatcgaggagctggttgtcaatttaggtgacctg
ctgaacacccatgagaaactaactcttctaaccgagctgagggaactcgtcgacagtaaa
gacagagctgctttcgacgatttggtttacaggcctcgggtggccatggcaaggagaaaa
ggtgaccgtgcccactcggatttaatagtgacgccatcgctacacgatcttccgaggggt
gtacccagtggttgttgccgtccaggacgactggtggacgtcgagggagatcctctagga
gtaacaggacctcttctgccgcgggataaccaggaatatagatcgcccagcgaggacagc
ggtctcggggccgacatgcccaggaccagagtgggctgtagaaggacgcagcagcaccaa
gtgacgacctccgatctcgccctctccaacgacgacgagtgcgacaaccagagaatgttc
ccgatcgctgtcgatgaacccgataaaagggatgtttgtcggtttcttttgcaggactac
gaggacgagctggagaacggacgtggacgaaggcacagctcgcctggtggatcacgaggc
aaccctagggattacggtcatcatcatcttcatccggataatttggagagcgacggtggt
tgcgatggtagcgacgccgagatgatcggtaatgggagacgcggaggcggaacggaaagg
gatcgcgatatggaggaggatgaggacgaaggaagggaggaaaggagctcagagggtgga
ggtggtggaggtttcggtggttggaggtcccacttgctcggtgggctaacgcaacgtgtc
aaatcctggtactggggcgccaggcccctcgaactcgcgcacaagctctcacggagcttc
gacatgcaagaagctcagctcctcgaagagggtggttctggtgcagctactgctggggct
gggggtgccggtggtccaccacgaagacatcacagtgctcaaaggttgactagaagcgaa
atgtcggagagaagagaagaagatggcgcccttgtggttcctgatcatcagggtaacctg
aggatcactgttaagaaaaccaagtcgattttaggtattgccatcgagggcggtgccaat
accaaacatccgctgcccagaatcatcaatatacatgataatggagcagcatacgaggct
ggtggtctcgaggtcggtcagctgatcctagaagtcgacggtcacaaggtcgaaggtctc
catcatcaggaggtagcaaggctgatcgcagagtcgttcgcgagacgagaccgcaacgag
atcgagttcctggtagtcgaggcaaagaagagcaacctggagccgaaaccgacggctctg
atattcctggaggcgtag
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