Bombus affinis (rusty patched bumble bee): 126917951
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Entry
126917951 CDS
T09368
Name
(RefSeq) transcription factor Sox-19b-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
baff03000
]
126917951
Transcription factors [BR:
baff03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
126917951
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
126917951
NCBI-ProteinID:
XP_050581391
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Position
6:7601863..7733789
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AA seq
385 aa
AA seq
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MRAGGNMCDGSFTDTLRGMQGMSSTSPPGGAGVGPMGVGLGSPLGPTAKKAQVEHIKRPM
NAFMVWSRLQRRKIAQENPKMHNSEISKRLGAEWKLLTEDEKRPFIDQAKRLRAQHMKEH
PDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGGMGQAGMGSYYGPAAAYSSLS
AASMAAAAAAAAQQSAAAMSAGLAAPAQVVSSMDAMKYSMEADKYRAAYMPPSTLAMSMY
SDPKYLDSSPKSYLDRSYLGVFEQSKLYMDQKPAITDYNRPSYEHNKLYEESSPGSIVGG
GPTRSPAAESPDMSKQHERTEQGSSSASSTSTSSAASPGASLPAYYPGSVQTSGLLGPQM
SQYSGYQTAPASGNESFRRPLTVIF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagagccggcggcaacatgtgcgacggctcgttcactgacaccctgcgcggtatgcag
ggcatgtcgagtacgtcgccacccggtggagcgggggtcggccccatgggggttggcctc
ggcagcccccttgggccgaccgcgaagaaggcgcaggtggaacacattaagaggccgatg
aacgcattcatggtatggtcacgattacaacgacggaagatcgcgcaggagaacccgaag
atgcacaactcagagatatccaagaggcttggtgccgaatggaaactcttaactgaggac
gagaaacgaccctttatcgatcaggcgaaaaggttacgagcacagcacatgaaggaacat
cccgattacaagtacagacctagaagaaagccgaaaaccttacgaaaggaaggttatcct
tacagtattccgtatcctagtgtgcccatggatgcgctccgagctggaatggctggtgga
atgggacaggcaggaatgggatcgtattatggtcccgcggccgcttatagttcactctct
gcagccagcatggccgcagccgctgctgcagcagcacagcagtccgcagcggcgatgtct
gcgggtctagcagcacctgctcaggtggtgagctcgatggacgccatgaagtactcgatg
gaggccgacaagtaccgagctgcatacatgccgccgagcactctggcgatgagcatgtac
tccgaccccaagtacctggactcgagtccaaaatcgtacctggatcggagctacttaggc
gtattcgaacaatcgaagctctacatggaccagaagcctgcgatcaccgactacaatcgg
cccagttacgagcacaacaaactttacgaagaatccagccctggtagtatcgtcggtggt
ggtccaacaaggtcaccagccgcagagtctccggacatgagcaaacagcacgagaggacc
gagcaaggttcgtctagcgcgagttctacgtctacctcgtcggctgcgagtcctggtgcc
agtctgccagcctattatccaggctcggtgcaaaccagcggtctattaggaccccagatg
agccaatacagcggctatcaaacagctccagcgtctggaaacgaatcgttcagacgaccc
ctcactgtcatcttctga
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